Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3008
Gene name
LocationContig_1762:47..284
Strand+
Gene length (bp)237
Transcript length (bp)237
Coding sequence length (bp)237
Protein length (aa) 79

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02020 W2 eIF4-gamma/eIF5/eIF2-epsilon 1.9E-21 10 73

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3008
LQRALRREPARAGALLAALLQQLYALDILDEDAILAWWADDRALQGDGMAALRDKCRVLVEWLENAEEEDDDDDD
DDD*
Coding >Hirsu2|3008
CTGCAGCGTGCCCTGCGCCGCGAGCCCGCCCGCGCCGGCGCCCTGCTCGCCGCCCTGCTGCAGCAGCTCTACGCC
CTCGACATCCTCGACGAGGACGCCATCCTCGCCTGGTGGGCCGACGACCGCGCCCTCCAGGGCGACGGCATGGCC
GCCCTCCGCGACAAGTGCAGGGTTCTGGTGGAGTGGCTGGAGAACGCCGAGGAGGAAGATGACGACGACGATGAC
GACGACGACTAG
Transcript >Hirsu2|3008
CTGCAGCGTGCCCTGCGCCGCGAGCCCGCCCGCGCCGGCGCCCTGCTCGCCGCCCTGCTGCAGCAGCTCTACGCC
CTCGACATCCTCGACGAGGACGCCATCCTCGCCTGGTGGGCCGACGACCGCGCCCTCCAGGGCGACGGCATGGCC
GCCCTCCGCGACAAGTGCAGGGTTCTGGTGGAGTGGCTGGAGAACGCCGAGGAGGAAGATGACGACGACGATGAC
GACGACGACTAG
Gene >Hirsu2|3008
CTGCAGCGTGCCCTGCGCCGCGAGCCCGCCCGCGCCGGCGCCCTGCTCGCCGCCCTGCTGCAGCAGCTCTACGCC
CTCGACATCCTCGACGAGGACGCCATCCTCGCCTGGTGGGCCGACGACCGCGCCCTCCAGGGCGACGGCATGGCC
GCCCTCCGCGACAAGTGCAGGGTTCTGGTGGAGTGGCTGGAGAACGCCGAGGAGGAAGATGACGACGACGATGAC
GACGACGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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