© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3002 |
| Gene name | |
| Location | Contig_176:15775..16322 |
| Strand | + |
| Gene length (bp) | 547 |
| Transcript length (bp) | 447 |
| Coding sequence length (bp) | 447 |
| Protein length (aa) | 149 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0783 | 0.121 | 0.9548 | 0.138 | 0.0485 | 0.0022 | 0.0698 | 0.0712 | 0.0426 | 0.0016 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 17 | 0.999672 |
| Orthofinder run ID | 4 |
| Orthogroup | 6581 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|03780 |
| Ophiocordyceps camponoti-rufipedis | Ophun1|5303 |
| Ophiocordyceps subramaniannii | Hirsu2|3002 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3002 MKLVISVVLSSLATAWAGAIQARNGHCGGDNCARQVTGTHPGLSPLESRRADCSNFMKTTVIPDATTTTITVTAQ QDEPSRARRDAVLEYRAATEAPTAVPAYASGCRGASKYSSACSCWGITAATSTAPQPTKTETVTVTSNVCEDL* |
| Coding | >Hirsu2|3002 ATGAAGCTCGTCATATCAGTCGTCCTGTCGTCCCTTGCCACCGCCTGGGCCGGCGCCATCCAGGCCCGCAATGGC CACTGCGGCGGCGATAACTGCGCCCGCCAGGTCACTGGCACCCATCCCGGCCTCAGCCCCCTCGAGTCCCGCAGG GCCGACTGCTCCAATTTTATGAAGACGACAGTCATTCCCGACGCGACGACGACGACCATCACCGTCACGGCCCAG CAGGACGAGCCATCCCGTGCCCGCCGTGACGCAGTGCTCGAGTACCGTGCCGCTACCGAGGCCCCGACGGCCGTC CCCGCGTACGCCTCGGGCTGTAGAGGGGCCAGCAAATATTCCTCCGCCTGCTCGTGCTGGGGCATCACCGCCGCG ACTAGCACCGCCCCGCAGCCGACCAAGACCGAGACCGTCACCGTCACTTCCAATGTGTGCGAGGACTTATAG |
| Transcript | >Hirsu2|3002 ATGAAGCTCGTCATATCAGTCGTCCTGTCGTCCCTTGCCACCGCCTGGGCCGGCGCCATCCAGGCCCGCAATGGC CACTGCGGCGGCGATAACTGCGCCCGCCAGGTCACTGGCACCCATCCCGGCCTCAGCCCCCTCGAGTCCCGCAGG GCCGACTGCTCCAATTTTATGAAGACGACAGTCATTCCCGACGCGACGACGACGACCATCACCGTCACGGCCCAG CAGGACGAGCCATCCCGTGCCCGCCGTGACGCAGTGCTCGAGTACCGTGCCGCTACCGAGGCCCCGACGGCCGTC CCCGCGTACGCCTCGGGCTGTAGAGGGGCCAGCAAATATTCCTCCGCCTGCTCGTGCTGGGGCATCACCGCCGCG ACTAGCACCGCCCCGCAGCCGACCAAGACCGAGACCGTCACCGTCACTTCCAATGTGTGCGAGGACTTATAG |
| Gene | >Hirsu2|3002 ATGAAGCTCGTCATATCAGTCGTCCTGTCGTCCCTTGCCACCGCCTGGGCCGGCGCCATCCAGGCCCGCAATGGC CACTGCGGCGGCGATAACTGCGCCCGCCAGGTCACTGGCACCCATCCCGGCCTCAGCCCCCTCGAGTCCCGCAGG GCCGACTGCTCCAATTTTATGAAGACGACAGTCATTCCCGACGCGACGTAAGTGCCGACTCCTTCTCCCTAGCCC TTCTTCCCATCTATATCCTGCCGGCGGGGTGCACCAGACGTCGGGGCTAACGGCCCGTGTCTCCCTGGCCAGGAC GACGACCATCACCGTCACGGCCCAGCAGGACGAGCCATCCCGTGCCCGCCGTGACGCAGTGCTCGAGTACCGTGC CGCTACCGAGGCCCCGACGGCCGTCCCCGCGTACGCCTCGGGCTGTAGAGGGGCCAGCAAATATTCCTCCGCCTG CTCGTGCTGGGGCATCACCGCCGCGACTAGCACCGCCCCGCAGCCGACCAAGACCGAGACCGTCACCGTCACTTC CAATGTGTGCGAGGACTTATAG |