© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|3001 |
| Gene name | |
| Location | Contig_176:10436..11830 |
| Strand | - |
| Gene length (bp) | 1394 |
| Transcript length (bp) | 1272 |
| Coding sequence length (bp) | 1272 |
| Protein length (aa) | 424 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00067 | p450 | Cytochrome P450 | 1.4E-06 | 294 | 360 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9LUC6|C7A14_ARATH | Cytochrome P450 72A14 OS=Arabidopsis thaliana GN=CYP72A14 PE=2 SV=1 | 128 | 341 | 2.0E-08 |
| sp|H2DH17|C7A22_PANGI | Cytochrome P450 CYP749A22 OS=Panax ginseng PE=2 SV=1 | 268 | 341 | 3.0E-08 |
| sp|Q9LUC5|C7A15_ARATH | Cytochrome P450 72A15 OS=Arabidopsis thaliana GN=CYP72A15 PE=2 SV=1 | 161 | 341 | 4.0E-08 |
| sp|Q6NKZ8|C14A2_ARATH | Cytochrome P450 714A2 OS=Arabidopsis thaliana GN=CYP714A2 PE=2 SV=1 | 164 | 363 | 2.0E-07 |
| sp|Q9LUC8|C7A13_ARATH | Cytochrome P450 72A13 OS=Arabidopsis thaliana GN=CYP72A13 PE=2 SV=1 | 129 | 341 | 2.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9LUC6|C7A14_ARATH | Cytochrome P450 72A14 OS=Arabidopsis thaliana GN=CYP72A14 PE=2 SV=1 | 128 | 341 | 2.0E-08 |
| sp|H2DH17|C7A22_PANGI | Cytochrome P450 CYP749A22 OS=Panax ginseng PE=2 SV=1 | 268 | 341 | 3.0E-08 |
| sp|Q9LUC5|C7A15_ARATH | Cytochrome P450 72A15 OS=Arabidopsis thaliana GN=CYP72A15 PE=2 SV=1 | 161 | 341 | 4.0E-08 |
| sp|Q6NKZ8|C14A2_ARATH | Cytochrome P450 714A2 OS=Arabidopsis thaliana GN=CYP714A2 PE=2 SV=1 | 164 | 363 | 2.0E-07 |
| sp|Q9LUC8|C7A13_ARATH | Cytochrome P450 72A13 OS=Arabidopsis thaliana GN=CYP72A13 PE=2 SV=1 | 129 | 341 | 2.0E-07 |
| sp|H1A988|C7254_GLYUR | 11-oxo-beta-amyrin 30-oxidase OS=Glycyrrhiza uralensis GN=CYP72A154 PE=1 SV=1 | 191 | 341 | 4.0E-07 |
| sp|Q6Z6D6|C7342_ORYSJ | Cytochrome P450 734A2 OS=Oryza sativa subsp. japonica GN=CYP734A2 PE=2 SV=1 | 273 | 370 | 1.0E-06 |
| sp|B9X287|C7346_ORYSJ | Cytochrome P450 734A6 OS=Oryza sativa subsp. japonica GN=CYP734A6 PE=2 SV=1 | 225 | 360 | 2.0E-06 |
| sp|L7X3S1|MSH_PAPSO | Methyltetrahydroprotoberberine 14-monooxygenase OS=Papaver somniferum GN=CYP82N4 PE=1 SV=1 | 140 | 372 | 3.0E-06 |
| sp|B9G934|C14C3_ORYSJ | Cytochrome P450 714C3 OS=Oryza sativa subsp. japonica GN=CYP714C3 PE=3 SV=2 | 220 | 341 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004497 | monooxygenase activity | Yes |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Yes |
| GO:0005506 | iron ion binding | Yes |
| GO:0020037 | heme binding | Yes |
| GO:0016491 | oxidoreductase activity | No |
| GO:0046906 | tetrapyrrole binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0046872 | metal ion binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043169 | cation binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3001 MDCRIKVSCGLALAVAICTLLYLISAFLRRPSASDKAVKEMIARHRSIADFKFFNAPLLPDRLRLRALPNARLIT AFDIRNSLTTTDEAEHKAFLRRAVNAMRAADTPTWHRVQKRAGKTLDMLTSRLYEADKGGLGLERVARIVCFDAV LEILFPHTRARLLDIDAADAATSNINRLWLESKKRQLDETSLQHVLKRLCVLLHHLLPGEDDTLALIIPAYETLW RVVLLTYVHVAFRYVDDQTRAQVRDVVKSVSEIGLGAPLSIDVNQFAQEALRLYPPTKRIYRASDCGQVAADVEL LHHDERIWGSDALDFRPCRFQILTRRQTEAYIPFGAGGNSCPAASGFGRKMIVLLVVAMIKRLGTAELRTRIWFC DEELDGDDKAPLPTGRDKMGAWVISVDPVPKTWRRVDIGRGNQLGIVR* |
| Coding | >Hirsu2|3001 ATGGACTGCCGTATAAAAGTTAGCTGCGGCCTCGCCTTGGCTGTCGCTATATGCACTCTCCTATATCTCATTTCA GCTTTTCTCCGTCGACCCTCCGCCTCGGATAAGGCGGTCAAGGAAATGATTGCAAGACACAGGAGCATTGCGGAT TTCAAATTCTTCAATGCGCCGCTGCTCCCTGACCGCCTGCGTCTTCGGGCTCTTCCGAATGCCCGTCTGATTACA GCCTTTGATATCCGTAACTCGTTGACCACTACGGATGAAGCTGAGCATAAAGCGTTTCTCAGACGTGCCGTGAAT GCCATGAGAGCAGCCGACACACCGACGTGGCATCGGGTCCAGAAACGAGCCGGTAAAACGCTCGATATGCTGACC TCGCGGCTTTACGAAGCAGACAAAGGCGGACTGGGTTTGGAGCGCGTTGCCCGAATCGTGTGTTTTGACGCGGTG CTGGAGATTCTCTTTCCCCACACGCGAGCGCGGCTCCTGGACATCGATGCAGCTGATGCTGCAACAAGCAACATC AATCGCCTATGGCTTGAGTCGAAGAAGAGGCAGTTGGACGAGACGAGTCTGCAACACGTGCTGAAACGACTGTGT GTGCTATTGCACCACCTGCTGCCTGGTGAAGACGATACTCTTGCGCTCATCATTCCCGCATACGAAACGCTCTGG CGGGTCGTACTTTTGACCTACGTCCATGTTGCATTCCGCTACGTGGATGACCAGACTAGGGCTCAAGTGAGGGAC GTCGTCAAGAGTGTGTCAGAAATAGGGCTGGGAGCACCGCTCTCCATCGACGTTAATCAGTTTGCTCAGGAGGCG CTGCGTTTATACCCTCCAACGAAACGCATCTACCGCGCTTCGGACTGCGGCCAAGTGGCAGCAGACGTCGAGTTG CTCCACCACGACGAGCGGATCTGGGGCTCCGATGCCCTCGACTTCCGGCCTTGCCGTTTCCAGATACTCACGCGG AGACAGACGGAGGCGTACATACCCTTCGGAGCAGGCGGAAACTCTTGTCCGGCCGCCAGTGGCTTCGGCCGCAAG ATGATTGTGCTCCTCGTTGTCGCGATGATTAAGCGACTTGGCACCGCAGAACTTCGGACTCGGATTTGGTTTTGT GACGAGGAGCTAGATGGGGATGATAAAGCGCCGTTGCCAACTGGTCGAGACAAGATGGGGGCTTGGGTCATATCT GTCGATCCAGTCCCGAAGACATGGAGAAGAGTTGATATCGGCCGTGGAAACCAGCTGGGGATTGTTCGATGA |
| Transcript | >Hirsu2|3001 ATGGACTGCCGTATAAAAGTTAGCTGCGGCCTCGCCTTGGCTGTCGCTATATGCACTCTCCTATATCTCATTTCA GCTTTTCTCCGTCGACCCTCCGCCTCGGATAAGGCGGTCAAGGAAATGATTGCAAGACACAGGAGCATTGCGGAT TTCAAATTCTTCAATGCGCCGCTGCTCCCTGACCGCCTGCGTCTTCGGGCTCTTCCGAATGCCCGTCTGATTACA GCCTTTGATATCCGTAACTCGTTGACCACTACGGATGAAGCTGAGCATAAAGCGTTTCTCAGACGTGCCGTGAAT GCCATGAGAGCAGCCGACACACCGACGTGGCATCGGGTCCAGAAACGAGCCGGTAAAACGCTCGATATGCTGACC TCGCGGCTTTACGAAGCAGACAAAGGCGGACTGGGTTTGGAGCGCGTTGCCCGAATCGTGTGTTTTGACGCGGTG CTGGAGATTCTCTTTCCCCACACGCGAGCGCGGCTCCTGGACATCGATGCAGCTGATGCTGCAACAAGCAACATC AATCGCCTATGGCTTGAGTCGAAGAAGAGGCAGTTGGACGAGACGAGTCTGCAACACGTGCTGAAACGACTGTGT GTGCTATTGCACCACCTGCTGCCTGGTGAAGACGATACTCTTGCGCTCATCATTCCCGCATACGAAACGCTCTGG CGGGTCGTACTTTTGACCTACGTCCATGTTGCATTCCGCTACGTGGATGACCAGACTAGGGCTCAAGTGAGGGAC GTCGTCAAGAGTGTGTCAGAAATAGGGCTGGGAGCACCGCTCTCCATCGACGTTAATCAGTTTGCTCAGGAGGCG CTGCGTTTATACCCTCCAACGAAACGCATCTACCGCGCTTCGGACTGCGGCCAAGTGGCAGCAGACGTCGAGTTG CTCCACCACGACGAGCGGATCTGGGGCTCCGATGCCCTCGACTTCCGGCCTTGCCGTTTCCAGATACTCACGCGG AGACAGACGGAGGCGTACATACCCTTCGGAGCAGGCGGAAACTCTTGTCCGGCCGCCAGTGGCTTCGGCCGCAAG ATGATTGTGCTCCTCGTTGTCGCGATGATTAAGCGACTTGGCACCGCAGAACTTCGGACTCGGATTTGGTTTTGT GACGAGGAGCTAGATGGGGATGATAAAGCGCCGTTGCCAACTGGTCGAGACAAGATGGGGGCTTGGGTCATATCT GTCGATCCAGTCCCGAAGACATGGAGAAGAGTTGATATCGGCCGTGGAAACCAGCTGGGGATTGTTCGATGA |
| Gene | >Hirsu2|3001 ATGGACTGCCGTATAAAAGTTAGCTGCGGCCTCGCCTTGGCTGTCGCTATATGCACTCTCCTATATCTCATTTCA GCTTTTCTCCGTCGACCCTCCGCCTCGGATAAGGCGGTCAAGGAAATGATTGCAAGACACAGGAGCATTGCGGAT TTCAAATTCTTCAATGCGCCGCTGCTCCCTGACCGCCTGCGTCTTCGGGCTCTTCCGAATGCCCGTCTGATTACA GCCTTTGATATCCGTAACTCGTTGACCACTACGGATGAAGCTGAGCATAAAGCGTTTCTCAGACGTGCCGTGAAT GCCATGAGAGCAGCCGACACACCGACGTGGCATCGGGTCCAGAAACGAGCCGGTAAAACGCTCGATATGCTGACC TCGCGGCTTTACGAAGCAGACAAAGGCGGACTGGGTTTGGAGCGCGTTGCCCGAATCGTGTGTTTTGACGCGGTG CTGGAGATTCTCTTTCCCCACACGCGAGCGCGGCTCCTGGACATCGATGCAGCTGATGCTGCAACAAGCAACATC AATCGCCTATGGCTTGAGTCGAAGAAGAGGCAGTTGGACGAGACGAGTCTGCAACACGTGCTGAAACGACTGTGT GTGCTATTGCACCACCTGCTGCCTGGTGAAGACGATACTCTTGCGCTCATCATTCCCGCATACGAAACGCTCTGG CGGGTCGTACTTTTGACCTACGTCCATGTTGCATTCCGCTACGTGGATGACCAGACTAGGGCTCAAGTGAGGGAC GTCGTCAAGAGTGTGTCAGAAATAGGGCTGGGAGCACCGCTCTCCATCGACGTTAATCAGTTTGCTCAGGTCCGT ACAGAAATGAACCCCATGGCTTGCTCTCCACAATGCACAATGTCTACGTGGACCGAATATGGGAGTTTTGTAAAG ACTGGATGAGAAATAAGGCTAAATATTCCTTTTTGCTCTAGGAGGCGCTGCGTTTATACCCTCCAACGAAACGCA TCTACCGCGCTTCGGACTGCGGCCAAGTGGCAGCAGACGTCGAGTTGCTCCACCACGACGAGCGGATCTGGGGCT CCGATGCCCTCGACTTCCGGCCTTGCCGTTTCCAGATACTCACGCGGAGACAGACGGAGGCGTACATACCCTTCG GAGCAGGCGGAAACTCTTGTCCGGCCGCCAGTGGCTTCGGCCGCAAGATGATTGTGCTCCTCGTTGTCGCGATGA TTAAGCGACTTGGCACCGCAGAACTTCGGACTCGGATTTGGTTTTGTGACGAGGAGCTAGATGGGGATGATAAAG CGCCGTTGCCAACTGGTCGAGACAAGATGGGGGCTTGGGTCATATCTGTCGATCCAGTCCCGAAGACATGGAGAA GAGTTGATATCGGCCGTGGAAACCAGCTGGGGATTGTTCGATGA |