Protein ID | Hirsu2|2996 |
Gene name | |
Location | Contig_1758:2664..4649 |
Strand | - |
Gene length (bp) | 1985 |
Transcript length (bp) | 1917 |
Coding sequence length (bp) | 1917 |
Protein length (aa) | 639 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11951 | Fungal_trans_2 | Fungal specific transcription factor domain | 6.0E-08 | 191 | 304 |
PF00172 | Zn_clus | Fungal Zn(2)-Cys(6) binuclear cluster domain | 3.3E-07 | 10 | 42 |
GO Term | Description | Terminal node |
---|---|---|
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Yes |
GO:0008270 | zinc ion binding | Yes |
GO:0006355 | regulation of transcription, DNA-templated | Yes |
GO:0005634 | nucleus | Yes |
GO:0043169 | cation binding | No |
GO:0065007 | biological regulation | No |
GO:0010468 | regulation of gene expression | No |
GO:0019222 | regulation of metabolic process | No |
GO:0050794 | regulation of cellular process | No |
GO:0005488 | binding | No |
GO:0046872 | metal ion binding | No |
GO:0043229 | intracellular organelle | No |
GO:0008150 | biological_process | No |
GO:0051252 | regulation of RNA metabolic process | No |
GO:0009889 | regulation of biosynthetic process | No |
GO:0010556 | regulation of macromolecule biosynthetic process | No |
GO:0043226 | organelle | No |
GO:0003674 | molecular_function | No |
GO:0005575 | cellular_component | No |
GO:0060255 | regulation of macromolecule metabolic process | No |
GO:0043231 | intracellular membrane-bounded organelle | No |
GO:0043227 | membrane-bounded organelle | No |
GO:2001141 | regulation of RNA biosynthetic process | No |
GO:0043167 | ion binding | No |
GO:0044424 | intracellular part | No |
GO:0051171 | regulation of nitrogen compound metabolic process | No |
GO:0050789 | regulation of biological process | No |
GO:1903506 | regulation of nucleic acid-templated transcription | No |
GO:0044464 | cell part | No |
GO:0031323 | regulation of cellular metabolic process | No |
GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
GO:0080090 | regulation of primary metabolic process | No |
GO:2000112 | regulation of cellular macromolecule biosynthetic process | No |
GO:0140110 | transcription regulator activity | No |
GO:0003700 | DNA-binding transcription factor activity | No |
GO:0046914 | transition metal ion binding | No |
GO:0031326 | regulation of cellular biosynthetic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 46 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
Fungal Specific TF |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2996 MVYCGKPSKGCSICRERKIRCDQRMPNCGQCEKRRHDCPGYRNIIDLMFRDESNHVIKRATSTRKRLKKTRNGSD PLPLGPVTPPTPVRQSPSVPPPSIVMIRHPKPFLGALRSGPSHDDFSTGRTDDAVLFRRDARDRLGRRAVDIPYA LTTSLRERGVAFFFARHVATDHGCYQNYDFIYDVWKPPFSLDMAESGDPILASMAAVGLIGLSKLTRCPETMLRA RQSYGVALHLANRALRDPLEAVTDGTMLAVLILGTFEFVSGRTPQTIRDWQVHVNGAAELASMRGAAQFRTKAGA RMFIMLCHTVLISCIRSGLPMPQSMVDLRNELWHLTDTRGPIWRVVDALYNALQVRHDIASGKVLGLDAVVEKLC QVEHQFAALVDSLPSSWKYREARVARPHPAVLGDSCHIYLGLTQATTWNGMRTMRMLVQESVLDVLYHSVDDPIT LPLHRQLQMAKAMKLIQMLGEAFVASVPQHFGIVSSSDFKRDDAERGTVAPAAAGKLTYTIMPRPTASGSHPHAL PAADMPVTTRSPTLLDPTQSGGYDRCHERFLTLATASHTIIWPLYTLGMSSSCTPDIMAYVLDRLDAMYRETGFE QARVVSDLVRNKVPSLSWDDIPTANLPKLPEEALPVMV* |
Coding | >Hirsu2|2996 ATGGTATACTGTGGCAAACCCTCAAAGGGCTGCTCCATCTGCCGGGAGCGCAAGATCCGCTGCGATCAGAGGATG CCCAATTGCGGTCAATGCGAGAAGCGTCGGCATGATTGCCCCGGCTATCGCAACATTATCGATCTCATGTTTCGC GACGAGAGCAACCATGTAATTAAGCGGGCCACCTCGACTCGCAAACGCCTCAAGAAGACGAGGAATGGGTCCGAT CCGCTCCCCCTGGGCCCGGTAACTCCCCCGACACCTGTTCGGCAGTCGCCGTCTGTCCCTCCGCCCTCGATAGTC ATGATTCGCCATCCGAAGCCATTTCTCGGTGCTCTCCGATCAGGCCCTTCGCATGACGACTTCAGCACGGGTCGG ACAGACGACGCGGTCCTCTTCCGCCGCGACGCCCGTGACCGTCTAGGCAGACGGGCTGTCGACATACCCTACGCC CTCACAACCTCTCTCCGTGAGCGCGGCGTCGCCTTCTTCTTCGCCCGTCACGTTGCCACAGACCATGGCTGCTAC CAGAATTATGACTTCATCTACGACGTCTGGAAGCCACCATTTAGCCTCGACATGGCCGAGTCTGGTGACCCAATC CTGGCCAGTATGGCCGCCGTCGGTCTCATCGGCCTGTCCAAACTCACTCGTTGCCCCGAGACCATGCTCCGCGCC CGACAGAGCTACGGCGTCGCTCTCCATCTGGCCAACCGCGCCCTGCGAGACCCGCTCGAGGCCGTCACCGACGGC ACCATGCTTGCTGTCCTCATCCTCGGCACCTTTGAGTTCGTCTCTGGTCGCACTCCGCAGACAATCCGCGACTGG CAGGTACACGTGAACGGCGCCGCCGAACTGGCCAGCATGAGGGGTGCCGCACAGTTCCGCACCAAAGCCGGCGCC CGCATGTTCATCATGCTCTGCCACACCGTCCTCATCAGCTGCATCCGGAGCGGGCTACCCATGCCCCAGTCAATG GTCGACCTCCGCAACGAGCTCTGGCATCTCACAGACACCAGAGGCCCGATATGGCGTGTCGTTGATGCGCTGTAT AATGCCCTGCAGGTCCGGCACGACATTGCCTCGGGCAAGGTTCTGGGTCTCGATGCCGTAGTCGAAAAGCTGTGC CAGGTGGAGCATCAATTCGCTGCACTGGTCGACAGCCTCCCTAGTTCCTGGAAGTACCGCGAGGCCAGGGTCGCC CGGCCTCACCCAGCCGTCCTCGGCGACTCCTGTCACATCTATCTGGGACTTACCCAGGCAACCACCTGGAACGGC ATGCGCACCATGAGGATGCTCGTGCAGGAGTCTGTGCTCGACGTCTTGTACCACAGCGTCGACGATCCGATCACG CTGCCGCTTCACCGCCAGCTGCAGATGGCCAAGGCCATGAAGCTGATACAGATGCTGGGCGAGGCCTTTGTGGCA AGTGTTCCCCAACACTTCGGCATCGTAAGCTCCAGTGACTTCAAGCGCGACGACGCGGAACGCGGCACCGTAGCC CCGGCGGCGGCGGGAAAGCTGACCTACACAATTATGCCGAGGCCCACAGCCTCTGGGTCCCACCCGCACGCTCTC CCGGCCGCCGACATGCCCGTCACGACAAGGAGTCCCACGCTTCTTGACCCGACCCAGTCCGGTGGCTATGACAGG TGCCACGAACGCTTTCTGACGCTCGCCACTGCCAGCCACACCATCATTTGGCCACTCTACACCCTGGGCATGTCG TCGTCCTGCACGCCCGACATCATGGCGTACGTGCTTGATAGGCTTGACGCCATGTACAGGGAGACGGGTTTCGAG CAAGCTCGCGTAGTGTCCGATCTCGTCCGTAACAAGGTTCCTTCCCTATCGTGGGACGACATTCCCACGGCGAAC CTCCCGAAGCTGCCAGAGGAGGCCCTGCCGGTAATGGTGTGA |
Transcript | >Hirsu2|2996 ATGGTATACTGTGGCAAACCCTCAAAGGGCTGCTCCATCTGCCGGGAGCGCAAGATCCGCTGCGATCAGAGGATG CCCAATTGCGGTCAATGCGAGAAGCGTCGGCATGATTGCCCCGGCTATCGCAACATTATCGATCTCATGTTTCGC GACGAGAGCAACCATGTAATTAAGCGGGCCACCTCGACTCGCAAACGCCTCAAGAAGACGAGGAATGGGTCCGAT CCGCTCCCCCTGGGCCCGGTAACTCCCCCGACACCTGTTCGGCAGTCGCCGTCTGTCCCTCCGCCCTCGATAGTC ATGATTCGCCATCCGAAGCCATTTCTCGGTGCTCTCCGATCAGGCCCTTCGCATGACGACTTCAGCACGGGTCGG ACAGACGACGCGGTCCTCTTCCGCCGCGACGCCCGTGACCGTCTAGGCAGACGGGCTGTCGACATACCCTACGCC CTCACAACCTCTCTCCGTGAGCGCGGCGTCGCCTTCTTCTTCGCCCGTCACGTTGCCACAGACCATGGCTGCTAC CAGAATTATGACTTCATCTACGACGTCTGGAAGCCACCATTTAGCCTCGACATGGCCGAGTCTGGTGACCCAATC CTGGCCAGTATGGCCGCCGTCGGTCTCATCGGCCTGTCCAAACTCACTCGTTGCCCCGAGACCATGCTCCGCGCC CGACAGAGCTACGGCGTCGCTCTCCATCTGGCCAACCGCGCCCTGCGAGACCCGCTCGAGGCCGTCACCGACGGC ACCATGCTTGCTGTCCTCATCCTCGGCACCTTTGAGTTCGTCTCTGGTCGCACTCCGCAGACAATCCGCGACTGG CAGGTACACGTGAACGGCGCCGCCGAACTGGCCAGCATGAGGGGTGCCGCACAGTTCCGCACCAAAGCCGGCGCC CGCATGTTCATCATGCTCTGCCACACCGTCCTCATCAGCTGCATCCGGAGCGGGCTACCCATGCCCCAGTCAATG GTCGACCTCCGCAACGAGCTCTGGCATCTCACAGACACCAGAGGCCCGATATGGCGTGTCGTTGATGCGCTGTAT AATGCCCTGCAGGTCCGGCACGACATTGCCTCGGGCAAGGTTCTGGGTCTCGATGCCGTAGTCGAAAAGCTGTGC CAGGTGGAGCATCAATTCGCTGCACTGGTCGACAGCCTCCCTAGTTCCTGGAAGTACCGCGAGGCCAGGGTCGCC CGGCCTCACCCAGCCGTCCTCGGCGACTCCTGTCACATCTATCTGGGACTTACCCAGGCAACCACCTGGAACGGC ATGCGCACCATGAGGATGCTCGTGCAGGAGTCTGTGCTCGACGTCTTGTACCACAGCGTCGACGATCCGATCACG CTGCCGCTTCACCGCCAGCTGCAGATGGCCAAGGCCATGAAGCTGATACAGATGCTGGGCGAGGCCTTTGTGGCA AGTGTTCCCCAACACTTCGGCATCGTAAGCTCCAGTGACTTCAAGCGCGACGACGCGGAACGCGGCACCGTAGCC CCGGCGGCGGCGGGAAAGCTGACCTACACAATTATGCCGAGGCCCACAGCCTCTGGGTCCCACCCGCACGCTCTC CCGGCCGCCGACATGCCCGTCACGACAAGGAGTCCCACGCTTCTTGACCCGACCCAGTCCGGTGGCTATGACAGG TGCCACGAACGCTTTCTGACGCTCGCCACTGCCAGCCACACCATCATTTGGCCACTCTACACCCTGGGCATGTCG TCGTCCTGCACGCCCGACATCATGGCGTACGTGCTTGATAGGCTTGACGCCATGTACAGGGAGACGGGTTTCGAG CAAGCTCGCGTAGTGTCCGATCTCGTCCGTAACAAGGTTCCTTCCCTATCGTGGGACGACATTCCCACGGCGAAC CTCCCGAAGCTGCCAGAGGAGGCCCTGCCGGTAATGGTGTGA |
Gene | >Hirsu2|2996 ATGGTATACTGTGGCAAACCCTCAAAGGGCTGCTCCATCTGCCGGGAGCGCAAGATCCGCGTACGAGTATCCCCT CCCTAAAGGGCCCTTTGTTCCCGCGCTGTTCCCGTCCCCCTGACGCTTCCCAGTGCGATCAGAGGATGCCCAATT GCGGTCAATGCGAGAAGCGTCGGCATGATTGCCCCGGCTATCGCAACATTATCGATCTCATGTTTCGCGACGAGA GCAACCATGTAATTAAGCGGGCCACCTCGACTCGCAAACGCCTCAAGAAGACGAGGAATGGGTCCGATCCGCTCC CCCTGGGCCCGGTAACTCCCCCGACACCTGTTCGGCAGTCGCCGTCTGTCCCTCCGCCCTCGATAGTCATGATTC GCCATCCGAAGCCATTTCTCGGTGCTCTCCGATCAGGCCCTTCGCATGACGACTTCAGCACGGGTCGGACAGACG ACGCGGTCCTCTTCCGCCGCGACGCCCGTGACCGTCTAGGCAGACGGGCTGTCGACATACCCTACGCCCTCACAA CCTCTCTCCGTGAGCGCGGCGTCGCCTTCTTCTTCGCCCGTCACGTTGCCACAGACCATGGCTGCTACCAGAATT ATGACTTCATCTACGACGTCTGGAAGCCACCATTTAGCCTCGACATGGCCGAGTCTGGTGACCCAATCCTGGCCA GTATGGCCGCCGTCGGTCTCATCGGCCTGTCCAAACTCACTCGTTGCCCCGAGACCATGCTCCGCGCCCGACAGA GCTACGGCGTCGCTCTCCATCTGGCCAACCGCGCCCTGCGAGACCCGCTCGAGGCCGTCACCGACGGCACCATGC TTGCTGTCCTCATCCTCGGCACCTTTGAGTTCGTCTCTGGTCGCACTCCGCAGACAATCCGCGACTGGCAGGTAC ACGTGAACGGCGCCGCCGAACTGGCCAGCATGAGGGGTGCCGCACAGTTCCGCACCAAAGCCGGCGCCCGCATGT TCATCATGCTCTGCCACACCGTCCTCATCAGCTGCATCCGGAGCGGGCTACCCATGCCCCAGTCAATGGTCGACC TCCGCAACGAGCTCTGGCATCTCACAGACACCAGAGGCCCGATATGGCGTGTCGTTGATGCGCTGTATAATGCCC TGCAGGTCCGGCACGACATTGCCTCGGGCAAGGTTCTGGGTCTCGATGCCGTAGTCGAAAAGCTGTGCCAGGTGG AGCATCAATTCGCTGCACTGGTCGACAGCCTCCCTAGTTCCTGGAAGTACCGCGAGGCCAGGGTCGCCCGGCCTC ACCCAGCCGTCCTCGGCGACTCCTGTCACATCTATCTGGGACTTACCCAGGCAACCACCTGGAACGGCATGCGCA CCATGAGGATGCTCGTGCAGGAGTCTGTGCTCGACGTCTTGTACCACAGCGTCGACGATCCGATCACGCTGCCGC TTCACCGCCAGCTGCAGATGGCCAAGGCCATGAAGCTGATACAGATGCTGGGCGAGGCCTTTGTGGCAAGTGTTC CCCAACACTTCGGCATCGTAAGCTCCAGTGACTTCAAGCGCGACGACGCGGAACGCGGCACCGTAGCCCCGGCGG CGGCGGGAAAGCTGACCTACACAATTATGCCGAGGCCCACAGCCTCTGGGTCCCACCCGCACGCTCTCCCGGCCG CCGACATGCCCGTCACGACAAGGAGTCCCACGCTTCTTGACCCGACCCAGTCCGGTGGCTATGACAGGTGCCACG AACGCTTTCTGACGCTCGCCACTGCCAGCCACACCATCATTTGGCCACTCTACACCCTGGGCATGTCGTCGTCCT GCACGCCCGACATCATGGCGTACGTGCTTGATAGGCTTGACGCCATGTACAGGGAGACGGGTTTCGAGCAAGCTC GCGTAGTGTCCGATCTCGTCCGTAACAAGGTTCCTTCCCTATCGTGGGACGACATTCCCACGGCGAACCTCCCGA AGCTGCCAGAGGAGGCCCTGCCGGTAATGGTGTGA |