Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|298
Gene name
LocationContig_1057:145..1017
Strand+
Gene length (bp)872
Transcript length (bp)804
Coding sequence length (bp)804
Protein length (aa) 268

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01699 Na_Ca_ex Sodium/calcium exchanger protein 1.3E-04 10 102
PF01699 Na_Ca_ex Sodium/calcium exchanger protein 1.3E-13 127 259

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 3 261 2.0E-47
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 1 258 8.0E-41
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 1 262 2.0E-33
sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 3 257 1.0E-32
sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 3 257 4.0E-31
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Swissprot ID Swissprot Description Start End E-value
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 3 261 2.0E-47
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 1 258 8.0E-41
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 1 262 2.0E-33
sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 3 257 1.0E-32
sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 3 257 4.0E-31
sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 3 257 4.0E-31
sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 3 257 6.0E-31
sp|P74072|CAX_SYNY3 Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 3 259 1.0E-29
sp|Q6YXZ1|CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 3 256 9.0E-29
sp|Q9LFZ8|CAX6_ARATH Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 3 257 1.0E-28
sp|Q945S5|CAX4_ARATH Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 1 257 6.0E-26
sp|Q5TKG3|CAX1B_ORYSJ Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 3 257 3.0E-24
sp|Q93Z81|CAX3_ARATH Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 1 257 1.0E-23
sp|Q39253|CAX1_ARATH Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 1 257 1.0E-23
sp|O34840|CHAA_BACSU Ca(2+)/H(+) antiporter ChaA OS=Bacillus subtilis (strain 168) GN=chaA PE=1 SV=1 3 261 8.0E-22
sp|Q769E5|CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 80 257 2.0E-21
sp|Q5KTQ9|CAX1C_ORYSJ Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1 76 257 3.0E-14
sp|P42839|VNX1_YEAST Low affinity vacuolar monovalent cation/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VNX1 PE=1 SV=1 3 257 2.0E-09
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0031224 intrinsic component of membrane No
GO:0009987 cellular process No
GO:0110165 cellular anatomical entity No
GO:0051179 localization No
GO:0005575 cellular_component No
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0006810 transport No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Lysosome/Vacuole Transmembrane domain 0.1955 0.1337 0.1844 0.4517 0.28 0.0111 0.2723 0.6509 0.1866 0.0369

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 15 34 19
2 41 63 22
3 78 100 22
4 120 139 19
5 154 176 22
6 189 211 22
7 226 243 17

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1107
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|10137
Ophiocordyceps subramaniannii Hirsu2|10138
Ophiocordyceps subramaniannii Hirsu2|10288
Ophiocordyceps subramaniannii Hirsu2|11247
Ophiocordyceps subramaniannii Hirsu2|1602
Ophiocordyceps subramaniannii Hirsu2|298 (this protein)
Ophiocordyceps subramaniannii Hirsu2|3563

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|298
MAIVQSRMMDSILSSILLILGSSFVLAGLNAPVVGINADVAGILTSLMIISCAALIMPSALHISDPGCGNAGSDP
SDDVLALSRFASLVLLIFYLLYLYFQSVTHADLLIDDSQEADHELHAVSNCVVLVLSALGVATCSDRQVHSIDGF
VKALGLSRSFVGLIIVPIVGNLGCFVGTVEWSRTNRIQLAISVIVSSTLQISLFVTPLLVVVGWVIDQKMSLQFD
TFQTTVLTISTLVVNCLVRDGETNYFEGVLLVATCVCPCALA*
Coding >Hirsu2|298
ATGGCCATCGTCCAGTCTAGAATGATGGACAGCATCCTATCGTCTATACTGCTGATACTCGGCTCCTCCTTCGTC
CTGGCCGGCCTGAACGCGCCAGTCGTCGGCATCAATGCCGACGTGGCTGGCATCCTGACGTCGCTCATGATCATC
TCGTGTGCCGCCCTCATCATGCCGTCGGCGCTGCACATCTCGGACCCGGGCTGCGGCAACGCCGGCAGCGATCCC
AGCGACGATGTCCTCGCCCTTTCGCGCTTCGCCTCCCTGGTCCTGCTCATCTTCTATCTCCTGTATCTCTACTTC
CAGTCCGTGACGCACGCCGACCTCTTAATCGACGACAGCCAAGAGGCCGACCACGAGCTGCATGCGGTGTCCAAC
TGCGTCGTCCTCGTCCTTTCCGCGCTCGGCGTCGCCACCTGCTCAGATCGCCAGGTCCACAGCATCGACGGCTTC
GTCAAGGCGCTGGGCCTAAGCCGTAGCTTTGTCGGGCTCATCATCGTGCCCATCGTCGGCAACCTGGGCTGTTTT
GTCGGCACCGTCGAGTGGTCCAGGACCAACCGCATACAGCTGGCCATATCCGTCATCGTGAGCAGCACGCTGCAG
ATCTCGCTCTTCGTCACGCCCCTGCTCGTCGTCGTCGGCTGGGTCATCGACCAGAAGATGTCGCTGCAGTTCGAC
ACGTTCCAGACGACTGTCCTGACCATATCCACTCTCGTCGTCAACTGTCTGGTGCGAGATGGAGAAACGAACTAC
TTCGAGGGCGTTCTCCTGGTCGCCACGTGCGTGTGTCCCTGCGCTCTTGCATAG
Transcript >Hirsu2|298
ATGGCCATCGTCCAGTCTAGAATGATGGACAGCATCCTATCGTCTATACTGCTGATACTCGGCTCCTCCTTCGTC
CTGGCCGGCCTGAACGCGCCAGTCGTCGGCATCAATGCCGACGTGGCTGGCATCCTGACGTCGCTCATGATCATC
TCGTGTGCCGCCCTCATCATGCCGTCGGCGCTGCACATCTCGGACCCGGGCTGCGGCAACGCCGGCAGCGATCCC
AGCGACGATGTCCTCGCCCTTTCGCGCTTCGCCTCCCTGGTCCTGCTCATCTTCTATCTCCTGTATCTCTACTTC
CAGTCCGTGACGCACGCCGACCTCTTAATCGACGACAGCCAAGAGGCCGACCACGAGCTGCATGCGGTGTCCAAC
TGCGTCGTCCTCGTCCTTTCCGCGCTCGGCGTCGCCACCTGCTCAGATCGCCAGGTCCACAGCATCGACGGCTTC
GTCAAGGCGCTGGGCCTAAGCCGTAGCTTTGTCGGGCTCATCATCGTGCCCATCGTCGGCAACCTGGGCTGTTTT
GTCGGCACCGTCGAGTGGTCCAGGACCAACCGCATACAGCTGGCCATATCCGTCATCGTGAGCAGCACGCTGCAG
ATCTCGCTCTTCGTCACGCCCCTGCTCGTCGTCGTCGGCTGGGTCATCGACCAGAAGATGTCGCTGCAGTTCGAC
ACGTTCCAGACGACTGTCCTGACCATATCCACTCTCGTCGTCAACTGTCTGGTGCGAGATGGAGAAACGAACTAC
TTCGAGGGCGTTCTCCTGGTCGCCACGTGCGTGTGTCCCTGCGCTCTTGCATAG
Gene >Hirsu2|298
ATGGCCATCGTCCAGTCTAGAATGATGGACAGCATCCTATCGTCTATACTGCTGGTGCGACGGCGGCTCGGCCGG
GCGAGAGGCCCGCGGAATTTGTCTGCTGACCACCGTGCCCTCGTCAGATACTCGGCTCCTCCTTCGTCCTGGCCG
GCCTGAACGCGCCAGTCGTCGGCATCAATGCCGACGTGGCTGGCATCCTGACGTCGCTCATGATCATCTCGTGTG
CCGCCCTCATCATGCCGTCGGCGCTGCACATCTCGGACCCGGGCTGCGGCAACGCCGGCAGCGATCCCAGCGACG
ATGTCCTCGCCCTTTCGCGCTTCGCCTCCCTGGTCCTGCTCATCTTCTATCTCCTGTATCTCTACTTCCAGTCCG
TGACGCACGCCGACCTCTTAATCGACGACAGCCAAGAGGCCGACCACGAGCTGCATGCGGTGTCCAACTGCGTCG
TCCTCGTCCTTTCCGCGCTCGGCGTCGCCACCTGCTCAGATCGCCAGGTCCACAGCATCGACGGCTTCGTCAAGG
CGCTGGGCCTAAGCCGTAGCTTTGTCGGGCTCATCATCGTGCCCATCGTCGGCAACCTGGGCTGTTTTGTCGGCA
CCGTCGAGTGGTCCAGGACCAACCGCATACAGCTGGCCATATCCGTCATCGTGAGCAGCACGCTGCAGATCTCGC
TCTTCGTCACGCCCCTGCTCGTCGTCGTCGGCTGGGTCATCGACCAGAAGATGTCGCTGCAGTTCGACACGTTCC
AGACGACTGTCCTGACCATATCCACTCTCGTCGTCAACTGTCTGGTGCGAGATGGAGAAACGAACTACTTCGAGG
GCGTTCTCCTGGTCGCCACGTGCGTGTGTCCCTGCGCTCTTGCATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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