Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2971
Gene name
LocationContig_1748:3661..4982
Strand-
Gene length (bp)1321
Transcript length (bp)1086
Coding sequence length (bp)1086
Protein length (aa) 362

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00498 FHA FHA domain 9.1E-15 24 93
PF17123 zf-RING_11 RING-like zinc finger 2.4E-13 149 177
PF13639 zf-RING_2 Ring finger domain 7.3E-07 149 195

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|A6ZRW7|DMA2_YEAS7 E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DMA2 PE=3 SV=1 4 202 4.0E-67
sp|P53924|DMA2_YEAST E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA2 PE=1 SV=1 4 202 5.0E-67
sp|P38823|DMA1_YEAST E3 ubiquitin-protein ligase DMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA1 PE=1 SV=1 4 204 3.0E-66
sp|Q10322|DMA1_SCHPO Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1 8 214 5.0E-61
sp|O74388|YNVD_SCHPO Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1 5 157 4.0E-15
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Swissprot ID Swissprot Description Start End E-value
sp|A6ZRW7|DMA2_YEAS7 E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DMA2 PE=3 SV=1 4 202 4.0E-67
sp|P53924|DMA2_YEAST E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA2 PE=1 SV=1 4 202 5.0E-67
sp|P38823|DMA1_YEAST E3 ubiquitin-protein ligase DMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA1 PE=1 SV=1 4 204 3.0E-66
sp|Q10322|DMA1_SCHPO Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1 8 214 5.0E-61
sp|O74388|YNVD_SCHPO Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1 5 157 4.0E-15
sp|Q28623|SLMAP_RABIT Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus GN=SLMAP PE=1 SV=2 8 95 2.0E-09
sp|Q14BN4|SLMAP_HUMAN Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1 8 95 2.0E-09
sp|P0C219|SLMAP_RAT Sarcolemmal membrane-associated protein OS=Rattus norvegicus GN=Slmap PE=1 SV=1 8 95 1.0E-08
sp|Q3URD3|SLMAP_MOUSE Sarcolemmal membrane-associated protein OS=Mus musculus GN=Slmap PE=1 SV=2 8 95 1.0E-08
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear export signal 0.5855 0.7524 0.017 0.076 0.0459 0.0008 0.092 0.1544 0.1895 0.0058

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5082
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1256
Ophiocordyceps australis map64 (Brazil) OphauB2|760
Ophiocordyceps camponoti-floridani Ophcf2|05993
Ophiocordyceps camponoti-rufipedis Ophun1|135
Ophiocordyceps kimflemingae Ophio5|5683
Ophiocordyceps subramaniannii Hirsu2|2971 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2971
LPTGSEVIRVGRYSERDGQAATMSGSQPSAAPVGFKSKVVSRRHCEFWCEDGKWYIKDVKSSSGTFLNHIRLSPP
SQESKAYPVNDGDIVQLGIDFKGGEEMIFRCVKMRLELNRGWQNKLNTFNVAAHKRLRTMASNGAAASPASSQDC
SICLNSIAPCQSLFVAPCSHTWHFKCVRSLLMSPQYPIFVCPNCRAGADLEADVEEPSEEWQQLEDCDEEACEQA
CEAAQDKAPARSPSPASVPEPADVTVQDADAMDVTVNVGAPAAPASRSTPPHASTEPLPINSPASGAGRVGHLRE
NGSPSPGPNGEGPITPRNNAGPWVFDGSAGRRAADATLEMRSLDAAADMDARAGGQSDDSS*
Coding >Hirsu2|2971
CTGCCCACCGGCTCCGAGGTGATCCGCGTCGGCCGCTACTCGGAGCGCGACGGCCAGGCCGCCACCATGTCGGGC
AGCCAGCCGTCGGCCGCCCCCGTCGGCTTCAAGAGCAAGGTCGTCAGCCGGAGACACTGCGAGTTCTGGTGCGAG
GACGGCAAGTGGTACATCAAGGACGTTAAGAGCTCTTCCGGCACCTTTCTCAACCACATCCGCCTCAGCCCCCCC
TCCCAGGAGAGCAAGGCCTACCCCGTCAACGACGGCGACATCGTCCAGCTCGGCATCGACTTCAAGGGGGGCGAG
GAGATGATCTTTCGATGCGTCAAGATGCGCCTCGAGCTCAACCGGGGATGGCAAAACAAGCTCAACACCTTCAAC
GTCGCCGCCCACAAGCGCCTGCGCACCATGGCCTCGAACGGCGCCGCCGCGTCCCCCGCTAGCTCCCAGGACTGC
TCCATCTGCCTCAACTCCATTGCGCCGTGCCAGTCTCTCTTCGTGGCCCCGTGCTCGCACACGTGGCATTTCAAG
TGCGTCCGCTCGCTGCTGATGTCGCCGCAATATCCCATCTTCGTCTGCCCCAACTGCCGCGCCGGCGCCGACCTC
GAGGCCGACGTGGAGGAGCCGTCGGAGGAGTGGCAGCAGCTGGAGGACTGCGACGAGGAGGCGTGCGAGCAGGCG
TGCGAGGCGGCGCAGGACAAGGCGCCCGCGCGGAGCCCGTCGCCGGCGTCGGTGCCGGAGCCGGCAGACGTGACG
GTGCAGGACGCCGACGCCATGGACGTGACGGTCAACGTCGGAGCGCCGGCCGCTCCGGCGTCGCGATCGACGCCG
CCACACGCTTCGACGGAGCCCCTACCCATCAACAGCCCCGCCTCGGGTGCCGGCCGGGTCGGCCACCTGAGGGAG
AACGGGTCCCCGTCGCCGGGCCCCAACGGCGAGGGCCCCATCACGCCGCGTAACAACGCGGGCCCCTGGGTCTTT
GACGGGAGCGCGGGTCGCCGAGCCGCCGACGCGACGCTGGAGATGCGAAGTCTCGATGCGGCGGCTGACATGGAC
GCGCGCGCGGGGGGGCAGAGTGACGACTCGAGCTGA
Transcript >Hirsu2|2971
CTGCCCACCGGCTCCGAGGTGATCCGCGTCGGCCGCTACTCGGAGCGCGACGGCCAGGCCGCCACCATGTCGGGC
AGCCAGCCGTCGGCCGCCCCCGTCGGCTTCAAGAGCAAGGTCGTCAGCCGGAGACACTGCGAGTTCTGGTGCGAG
GACGGCAAGTGGTACATCAAGGACGTTAAGAGCTCTTCCGGCACCTTTCTCAACCACATCCGCCTCAGCCCCCCC
TCCCAGGAGAGCAAGGCCTACCCCGTCAACGACGGCGACATCGTCCAGCTCGGCATCGACTTCAAGGGGGGCGAG
GAGATGATCTTTCGATGCGTCAAGATGCGCCTCGAGCTCAACCGGGGATGGCAAAACAAGCTCAACACCTTCAAC
GTCGCCGCCCACAAGCGCCTGCGCACCATGGCCTCGAACGGCGCCGCCGCGTCCCCCGCTAGCTCCCAGGACTGC
TCCATCTGCCTCAACTCCATTGCGCCGTGCCAGTCTCTCTTCGTGGCCCCGTGCTCGCACACGTGGCATTTCAAG
TGCGTCCGCTCGCTGCTGATGTCGCCGCAATATCCCATCTTCGTCTGCCCCAACTGCCGCGCCGGCGCCGACCTC
GAGGCCGACGTGGAGGAGCCGTCGGAGGAGTGGCAGCAGCTGGAGGACTGCGACGAGGAGGCGTGCGAGCAGGCG
TGCGAGGCGGCGCAGGACAAGGCGCCCGCGCGGAGCCCGTCGCCGGCGTCGGTGCCGGAGCCGGCAGACGTGACG
GTGCAGGACGCCGACGCCATGGACGTGACGGTCAACGTCGGAGCGCCGGCCGCTCCGGCGTCGCGATCGACGCCG
CCACACGCTTCGACGGAGCCCCTACCCATCAACAGCCCCGCCTCGGGTGCCGGCCGGGTCGGCCACCTGAGGGAG
AACGGGTCCCCGTCGCCGGGCCCCAACGGCGAGGGCCCCATCACGCCGCGTAACAACGCGGGCCCCTGGGTCTTT
GACGGGAGCGCGGGTCGCCGAGCCGCCGACGCGACGCTGGAGATGCGAAGTCTCGATGCGGCGGCTGACATGGAC
GCGCGCGCGGGGGGGCAGAGTGACGACTCGAGCTGA
Gene >Hirsu2|2971
CTGCCCACCGGCTCCGAGGTGATCCGCGTCGGCCGCTACTCGGAGCGCGACGGCCAGGCCGCCACCATGTCGGGC
AGCCAGCCGTCGGCCGCCCCCGTCGGCTTCAAGAGCAAGGTCGTCAGCCGGAGACACTGCGAGTTCTGGTGCGAG
GACGGCAAGTGGTACATCAAGGACGTTAAGAGCTCTTCCGGCACCTTTCTCAACCACATCCGCCTCAGCCCCCCC
TCCCAGGAGAGCAAGGCCTACCCCGTCAACGACGGCGACATCGTCCAGCTCGGCATCGACTTCAAGGGGGGCGAG
GAGATGATCTTTCGATGCGTCAAGATGCGCCTCGAGCTCAACCGGGGATGGCAAAACAAGCTCAACACCTTCAAG
TGAGTCGCCTCGCCTCGCCTCGCCTCGCCTTCCCCCCGCCGCTCCCGGCCACCACGCCCGCCACTCCTCCCCCCC
CTGCCGCCCTCGCGCGTCCTTCCGGGCTAACCTCGTGTGCCTCCCCACCTCTAGCGTCGCCGCCCACAAGCGCCT
GCGCACCATGGCCTCGAACGGCGCCGCCGCGTCCCCCGCTAGCTCCCAGGACTGCTCCATCTGCCTCAACTCCAT
TGCGGTACGTTCTCCTCCCCCTGCCCGCCGAAGCTTGACTTCACCCGGGGGCGGTCGACCCGAGGCCGCCGAGGC
GGACCGTTGAAGCTGACCTCGCTCGCCGCTTCAGCCGTGCCAGTCTCTCTTCGTGGCCCCGTGCTCGCACACGTG
GCATTTCAAGTGCGTCCGCTCGCTGCTGATGTCGCCGCAATATCCCATCTTCGTCTGCCCCAACTGCCGCGCCGG
CGCCGACCTCGAGGCCGACGTGGAGGAGCCGTCGGAGGAGTGGCAGCAGCTGGAGGACTGCGACGAGGAGGCGTG
CGAGCAGGCGTGCGAGGCGGCGCAGGACAAGGCGCCCGCGCGGAGCCCGTCGCCGGCGTCGGTGCCGGAGCCGGC
AGACGTGACGGTGCAGGACGCCGACGCCATGGACGTGACGGTCAACGTCGGAGCGCCGGCCGCTCCGGCGTCGCG
ATCGACGCCGCCACACGCTTCGACGGAGCCCCTACCCATCAACAGCCCCGCCTCGGGTGCCGGCCGGGTCGGCCA
CCTGAGGGAGAACGGGTCCCCGTCGCCGGGCCCCAACGGCGAGGGCCCCATCACGCCGCGTAACAACGCGGGCCC
CTGGGTCTTTGACGGGAGCGCGGGTCGCCGAGCCGCCGACGCGACGCTGGAGATGCGAAGTCTCGATGCGGCGGC
TGACATGGACGCGCGCGCGGGGGGGCAGAGTGACGACTCGAGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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