Protein ID | Hirsu2|2971 |
Gene name | |
Location | Contig_1748:3661..4982 |
Strand | - |
Gene length (bp) | 1321 |
Transcript length (bp) | 1086 |
Coding sequence length (bp) | 1086 |
Protein length (aa) | 362 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00498 | FHA | FHA domain | 9.1E-15 | 24 | 93 |
PF17123 | zf-RING_11 | RING-like zinc finger | 2.4E-13 | 149 | 177 |
PF13639 | zf-RING_2 | Ring finger domain | 7.3E-07 | 149 | 195 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|A6ZRW7|DMA2_YEAS7 | E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DMA2 PE=3 SV=1 | 4 | 202 | 4.0E-67 |
sp|P53924|DMA2_YEAST | E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA2 PE=1 SV=1 | 4 | 202 | 5.0E-67 |
sp|P38823|DMA1_YEAST | E3 ubiquitin-protein ligase DMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA1 PE=1 SV=1 | 4 | 204 | 3.0E-66 |
sp|Q10322|DMA1_SCHPO | Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1 | 8 | 214 | 5.0E-61 |
sp|O74388|YNVD_SCHPO | Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1 | 5 | 157 | 4.0E-15 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|A6ZRW7|DMA2_YEAS7 | E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DMA2 PE=3 SV=1 | 4 | 202 | 4.0E-67 |
sp|P53924|DMA2_YEAST | E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA2 PE=1 SV=1 | 4 | 202 | 5.0E-67 |
sp|P38823|DMA1_YEAST | E3 ubiquitin-protein ligase DMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA1 PE=1 SV=1 | 4 | 204 | 3.0E-66 |
sp|Q10322|DMA1_SCHPO | Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1 | 8 | 214 | 5.0E-61 |
sp|O74388|YNVD_SCHPO | Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1 | 5 | 157 | 4.0E-15 |
sp|Q28623|SLMAP_RABIT | Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus GN=SLMAP PE=1 SV=2 | 8 | 95 | 2.0E-09 |
sp|Q14BN4|SLMAP_HUMAN | Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1 | 8 | 95 | 2.0E-09 |
sp|P0C219|SLMAP_RAT | Sarcolemmal membrane-associated protein OS=Rattus norvegicus GN=Slmap PE=1 SV=1 | 8 | 95 | 1.0E-08 |
sp|Q3URD3|SLMAP_MOUSE | Sarcolemmal membrane-associated protein OS=Mus musculus GN=Slmap PE=1 SV=2 | 8 | 95 | 1.0E-08 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | Nuclear export signal | 0.5855 | 0.7524 | 0.017 | 0.076 | 0.0459 | 0.0008 | 0.092 | 0.1544 | 0.1895 | 0.0058 |
Orthofinder run ID | 4 |
Orthogroup | 5082 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2971 LPTGSEVIRVGRYSERDGQAATMSGSQPSAAPVGFKSKVVSRRHCEFWCEDGKWYIKDVKSSSGTFLNHIRLSPP SQESKAYPVNDGDIVQLGIDFKGGEEMIFRCVKMRLELNRGWQNKLNTFNVAAHKRLRTMASNGAAASPASSQDC SICLNSIAPCQSLFVAPCSHTWHFKCVRSLLMSPQYPIFVCPNCRAGADLEADVEEPSEEWQQLEDCDEEACEQA CEAAQDKAPARSPSPASVPEPADVTVQDADAMDVTVNVGAPAAPASRSTPPHASTEPLPINSPASGAGRVGHLRE NGSPSPGPNGEGPITPRNNAGPWVFDGSAGRRAADATLEMRSLDAAADMDARAGGQSDDSS* |
Coding | >Hirsu2|2971 CTGCCCACCGGCTCCGAGGTGATCCGCGTCGGCCGCTACTCGGAGCGCGACGGCCAGGCCGCCACCATGTCGGGC AGCCAGCCGTCGGCCGCCCCCGTCGGCTTCAAGAGCAAGGTCGTCAGCCGGAGACACTGCGAGTTCTGGTGCGAG GACGGCAAGTGGTACATCAAGGACGTTAAGAGCTCTTCCGGCACCTTTCTCAACCACATCCGCCTCAGCCCCCCC TCCCAGGAGAGCAAGGCCTACCCCGTCAACGACGGCGACATCGTCCAGCTCGGCATCGACTTCAAGGGGGGCGAG GAGATGATCTTTCGATGCGTCAAGATGCGCCTCGAGCTCAACCGGGGATGGCAAAACAAGCTCAACACCTTCAAC GTCGCCGCCCACAAGCGCCTGCGCACCATGGCCTCGAACGGCGCCGCCGCGTCCCCCGCTAGCTCCCAGGACTGC TCCATCTGCCTCAACTCCATTGCGCCGTGCCAGTCTCTCTTCGTGGCCCCGTGCTCGCACACGTGGCATTTCAAG TGCGTCCGCTCGCTGCTGATGTCGCCGCAATATCCCATCTTCGTCTGCCCCAACTGCCGCGCCGGCGCCGACCTC GAGGCCGACGTGGAGGAGCCGTCGGAGGAGTGGCAGCAGCTGGAGGACTGCGACGAGGAGGCGTGCGAGCAGGCG TGCGAGGCGGCGCAGGACAAGGCGCCCGCGCGGAGCCCGTCGCCGGCGTCGGTGCCGGAGCCGGCAGACGTGACG GTGCAGGACGCCGACGCCATGGACGTGACGGTCAACGTCGGAGCGCCGGCCGCTCCGGCGTCGCGATCGACGCCG CCACACGCTTCGACGGAGCCCCTACCCATCAACAGCCCCGCCTCGGGTGCCGGCCGGGTCGGCCACCTGAGGGAG AACGGGTCCCCGTCGCCGGGCCCCAACGGCGAGGGCCCCATCACGCCGCGTAACAACGCGGGCCCCTGGGTCTTT GACGGGAGCGCGGGTCGCCGAGCCGCCGACGCGACGCTGGAGATGCGAAGTCTCGATGCGGCGGCTGACATGGAC GCGCGCGCGGGGGGGCAGAGTGACGACTCGAGCTGA |
Transcript | >Hirsu2|2971 CTGCCCACCGGCTCCGAGGTGATCCGCGTCGGCCGCTACTCGGAGCGCGACGGCCAGGCCGCCACCATGTCGGGC AGCCAGCCGTCGGCCGCCCCCGTCGGCTTCAAGAGCAAGGTCGTCAGCCGGAGACACTGCGAGTTCTGGTGCGAG GACGGCAAGTGGTACATCAAGGACGTTAAGAGCTCTTCCGGCACCTTTCTCAACCACATCCGCCTCAGCCCCCCC TCCCAGGAGAGCAAGGCCTACCCCGTCAACGACGGCGACATCGTCCAGCTCGGCATCGACTTCAAGGGGGGCGAG GAGATGATCTTTCGATGCGTCAAGATGCGCCTCGAGCTCAACCGGGGATGGCAAAACAAGCTCAACACCTTCAAC GTCGCCGCCCACAAGCGCCTGCGCACCATGGCCTCGAACGGCGCCGCCGCGTCCCCCGCTAGCTCCCAGGACTGC TCCATCTGCCTCAACTCCATTGCGCCGTGCCAGTCTCTCTTCGTGGCCCCGTGCTCGCACACGTGGCATTTCAAG TGCGTCCGCTCGCTGCTGATGTCGCCGCAATATCCCATCTTCGTCTGCCCCAACTGCCGCGCCGGCGCCGACCTC GAGGCCGACGTGGAGGAGCCGTCGGAGGAGTGGCAGCAGCTGGAGGACTGCGACGAGGAGGCGTGCGAGCAGGCG TGCGAGGCGGCGCAGGACAAGGCGCCCGCGCGGAGCCCGTCGCCGGCGTCGGTGCCGGAGCCGGCAGACGTGACG GTGCAGGACGCCGACGCCATGGACGTGACGGTCAACGTCGGAGCGCCGGCCGCTCCGGCGTCGCGATCGACGCCG CCACACGCTTCGACGGAGCCCCTACCCATCAACAGCCCCGCCTCGGGTGCCGGCCGGGTCGGCCACCTGAGGGAG AACGGGTCCCCGTCGCCGGGCCCCAACGGCGAGGGCCCCATCACGCCGCGTAACAACGCGGGCCCCTGGGTCTTT GACGGGAGCGCGGGTCGCCGAGCCGCCGACGCGACGCTGGAGATGCGAAGTCTCGATGCGGCGGCTGACATGGAC GCGCGCGCGGGGGGGCAGAGTGACGACTCGAGCTGA |
Gene | >Hirsu2|2971 CTGCCCACCGGCTCCGAGGTGATCCGCGTCGGCCGCTACTCGGAGCGCGACGGCCAGGCCGCCACCATGTCGGGC AGCCAGCCGTCGGCCGCCCCCGTCGGCTTCAAGAGCAAGGTCGTCAGCCGGAGACACTGCGAGTTCTGGTGCGAG GACGGCAAGTGGTACATCAAGGACGTTAAGAGCTCTTCCGGCACCTTTCTCAACCACATCCGCCTCAGCCCCCCC TCCCAGGAGAGCAAGGCCTACCCCGTCAACGACGGCGACATCGTCCAGCTCGGCATCGACTTCAAGGGGGGCGAG GAGATGATCTTTCGATGCGTCAAGATGCGCCTCGAGCTCAACCGGGGATGGCAAAACAAGCTCAACACCTTCAAG TGAGTCGCCTCGCCTCGCCTCGCCTCGCCTTCCCCCCGCCGCTCCCGGCCACCACGCCCGCCACTCCTCCCCCCC CTGCCGCCCTCGCGCGTCCTTCCGGGCTAACCTCGTGTGCCTCCCCACCTCTAGCGTCGCCGCCCACAAGCGCCT GCGCACCATGGCCTCGAACGGCGCCGCCGCGTCCCCCGCTAGCTCCCAGGACTGCTCCATCTGCCTCAACTCCAT TGCGGTACGTTCTCCTCCCCCTGCCCGCCGAAGCTTGACTTCACCCGGGGGCGGTCGACCCGAGGCCGCCGAGGC GGACCGTTGAAGCTGACCTCGCTCGCCGCTTCAGCCGTGCCAGTCTCTCTTCGTGGCCCCGTGCTCGCACACGTG GCATTTCAAGTGCGTCCGCTCGCTGCTGATGTCGCCGCAATATCCCATCTTCGTCTGCCCCAACTGCCGCGCCGG CGCCGACCTCGAGGCCGACGTGGAGGAGCCGTCGGAGGAGTGGCAGCAGCTGGAGGACTGCGACGAGGAGGCGTG CGAGCAGGCGTGCGAGGCGGCGCAGGACAAGGCGCCCGCGCGGAGCCCGTCGCCGGCGTCGGTGCCGGAGCCGGC AGACGTGACGGTGCAGGACGCCGACGCCATGGACGTGACGGTCAACGTCGGAGCGCCGGCCGCTCCGGCGTCGCG ATCGACGCCGCCACACGCTTCGACGGAGCCCCTACCCATCAACAGCCCCGCCTCGGGTGCCGGCCGGGTCGGCCA CCTGAGGGAGAACGGGTCCCCGTCGCCGGGCCCCAACGGCGAGGGCCCCATCACGCCGCGTAACAACGCGGGCCC CTGGGTCTTTGACGGGAGCGCGGGTCGCCGAGCCGCCGACGCGACGCTGGAGATGCGAAGTCTCGATGCGGCGGC TGACATGGACGCGCGCGCGGGGGGGCAGAGTGACGACTCGAGCTGA |