Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|2971
Gene name
Location	Contig_1748:3661..4982
Strand	-
Gene length (bp)	1321
Transcript length (bp)	1086
Coding sequence length (bp)	1086
Protein length (aa)	362

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00498	FHA	FHA domain	9.1E-15	24	93
PF17123	zf-RING_11	RING-like zinc finger	2.4E-13	149	177
PF13639	zf-RING_2	Ring finger domain	7.3E-07	149	195

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|A6ZRW7\|DMA2_YEAS7	E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DMA2 PE=3 SV=1	4	202	4.0E-67
sp\|P53924\|DMA2_YEAST	E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA2 PE=1 SV=1	4	202	5.0E-67
sp\|P38823\|DMA1_YEAST	E3 ubiquitin-protein ligase DMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA1 PE=1 SV=1	4	204	3.0E-66
sp\|Q10322\|DMA1_SCHPO	Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1	8	214	5.0E-61
sp\|O74388\|YNVD_SCHPO	Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1	5	157	4.0E-15

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|A6ZRW7\|DMA2_YEAS7	E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DMA2 PE=3 SV=1	4	202	4.0E-67
sp\|P53924\|DMA2_YEAST	E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA2 PE=1 SV=1	4	202	5.0E-67
sp\|P38823\|DMA1_YEAST	E3 ubiquitin-protein ligase DMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA1 PE=1 SV=1	4	204	3.0E-66
sp\|Q10322\|DMA1_SCHPO	Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1	8	214	5.0E-61
sp\|O74388\|YNVD_SCHPO	Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1	5	157	4.0E-15
sp\|Q28623\|SLMAP_RABIT	Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus GN=SLMAP PE=1 SV=2	8	95	2.0E-09
sp\|Q14BN4\|SLMAP_HUMAN	Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1	8	95	2.0E-09
sp\|P0C219\|SLMAP_RAT	Sarcolemmal membrane-associated protein OS=Rattus norvegicus GN=Slmap PE=1 SV=1	8	95	1.0E-08
sp\|Q3URD3\|SLMAP_MOUSE	Sarcolemmal membrane-associated protein OS=Mus musculus GN=Slmap PE=1 SV=2	8	95	1.0E-08

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GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 40	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|2971 LPTGSEVIRVGRYSERDGQAATMSGSQPSAAPVGFKSKVVSRRHCEFWCEDGKWYIKDVKSSSGTFLNHIRLSPP SQESKAYPVNDGDIVQLGIDFKGGEEMIFRCVKMRLELNRGWQNKLNTFNVAAHKRLRTMASNGAAASPASSQDC SICLNSIAPCQSLFVAPCSHTWHFKCVRSLLMSPQYPIFVCPNCRAGADLEADVEEPSEEWQQLEDCDEEACEQA CEAAQDKAPARSPSPASVPEPADVTVQDADAMDVTVNVGAPAAPASRSTPPHASTEPLPINSPASGAGRVGHLRE NGSPSPGPNGEGPITPRNNAGPWVFDGSAGRRAADATLEMRSLDAAADMDARAGGQSDDSS*
Coding	>Hirsu2\|2971 CTGCCCACCGGCTCCGAGGTGATCCGCGTCGGCCGCTACTCGGAGCGCGACGGCCAGGCCGCCACCATGTCGGGC AGCCAGCCGTCGGCCGCCCCCGTCGGCTTCAAGAGCAAGGTCGTCAGCCGGAGACACTGCGAGTTCTGGTGCGAG GACGGCAAGTGGTACATCAAGGACGTTAAGAGCTCTTCCGGCACCTTTCTCAACCACATCCGCCTCAGCCCCCCC TCCCAGGAGAGCAAGGCCTACCCCGTCAACGACGGCGACATCGTCCAGCTCGGCATCGACTTCAAGGGGGGCGAG GAGATGATCTTTCGATGCGTCAAGATGCGCCTCGAGCTCAACCGGGGATGGCAAAACAAGCTCAACACCTTCAAC GTCGCCGCCCACAAGCGCCTGCGCACCATGGCCTCGAACGGCGCCGCCGCGTCCCCCGCTAGCTCCCAGGACTGC TCCATCTGCCTCAACTCCATTGCGCCGTGCCAGTCTCTCTTCGTGGCCCCGTGCTCGCACACGTGGCATTTCAAG TGCGTCCGCTCGCTGCTGATGTCGCCGCAATATCCCATCTTCGTCTGCCCCAACTGCCGCGCCGGCGCCGACCTC GAGGCCGACGTGGAGGAGCCGTCGGAGGAGTGGCAGCAGCTGGAGGACTGCGACGAGGAGGCGTGCGAGCAGGCG TGCGAGGCGGCGCAGGACAAGGCGCCCGCGCGGAGCCCGTCGCCGGCGTCGGTGCCGGAGCCGGCAGACGTGACG GTGCAGGACGCCGACGCCATGGACGTGACGGTCAACGTCGGAGCGCCGGCCGCTCCGGCGTCGCGATCGACGCCG CCACACGCTTCGACGGAGCCCCTACCCATCAACAGCCCCGCCTCGGGTGCCGGCCGGGTCGGCCACCTGAGGGAG AACGGGTCCCCGTCGCCGGGCCCCAACGGCGAGGGCCCCATCACGCCGCGTAACAACGCGGGCCCCTGGGTCTTT GACGGGAGCGCGGGTCGCCGAGCCGCCGACGCGACGCTGGAGATGCGAAGTCTCGATGCGGCGGCTGACATGGAC GCGCGCGCGGGGGGGCAGAGTGACGACTCGAGCTGA
Transcript	>Hirsu2\|2971 CTGCCCACCGGCTCCGAGGTGATCCGCGTCGGCCGCTACTCGGAGCGCGACGGCCAGGCCGCCACCATGTCGGGC AGCCAGCCGTCGGCCGCCCCCGTCGGCTTCAAGAGCAAGGTCGTCAGCCGGAGACACTGCGAGTTCTGGTGCGAG GACGGCAAGTGGTACATCAAGGACGTTAAGAGCTCTTCCGGCACCTTTCTCAACCACATCCGCCTCAGCCCCCCC TCCCAGGAGAGCAAGGCCTACCCCGTCAACGACGGCGACATCGTCCAGCTCGGCATCGACTTCAAGGGGGGCGAG GAGATGATCTTTCGATGCGTCAAGATGCGCCTCGAGCTCAACCGGGGATGGCAAAACAAGCTCAACACCTTCAAC GTCGCCGCCCACAAGCGCCTGCGCACCATGGCCTCGAACGGCGCCGCCGCGTCCCCCGCTAGCTCCCAGGACTGC TCCATCTGCCTCAACTCCATTGCGCCGTGCCAGTCTCTCTTCGTGGCCCCGTGCTCGCACACGTGGCATTTCAAG TGCGTCCGCTCGCTGCTGATGTCGCCGCAATATCCCATCTTCGTCTGCCCCAACTGCCGCGCCGGCGCCGACCTC GAGGCCGACGTGGAGGAGCCGTCGGAGGAGTGGCAGCAGCTGGAGGACTGCGACGAGGAGGCGTGCGAGCAGGCG TGCGAGGCGGCGCAGGACAAGGCGCCCGCGCGGAGCCCGTCGCCGGCGTCGGTGCCGGAGCCGGCAGACGTGACG GTGCAGGACGCCGACGCCATGGACGTGACGGTCAACGTCGGAGCGCCGGCCGCTCCGGCGTCGCGATCGACGCCG CCACACGCTTCGACGGAGCCCCTACCCATCAACAGCCCCGCCTCGGGTGCCGGCCGGGTCGGCCACCTGAGGGAG AACGGGTCCCCGTCGCCGGGCCCCAACGGCGAGGGCCCCATCACGCCGCGTAACAACGCGGGCCCCTGGGTCTTT GACGGGAGCGCGGGTCGCCGAGCCGCCGACGCGACGCTGGAGATGCGAAGTCTCGATGCGGCGGCTGACATGGAC GCGCGCGCGGGGGGGCAGAGTGACGACTCGAGCTGA
Gene	>Hirsu2\|2971 CTGCCCACCGGCTCCGAGGTGATCCGCGTCGGCCGCTACTCGGAGCGCGACGGCCAGGCCGCCACCATGTCGGGC AGCCAGCCGTCGGCCGCCCCCGTCGGCTTCAAGAGCAAGGTCGTCAGCCGGAGACACTGCGAGTTCTGGTGCGAG GACGGCAAGTGGTACATCAAGGACGTTAAGAGCTCTTCCGGCACCTTTCTCAACCACATCCGCCTCAGCCCCCCC TCCCAGGAGAGCAAGGCCTACCCCGTCAACGACGGCGACATCGTCCAGCTCGGCATCGACTTCAAGGGGGGCGAG GAGATGATCTTTCGATGCGTCAAGATGCGCCTCGAGCTCAACCGGGGATGGCAAAACAAGCTCAACACCTTCAAG TGAGTCGCCTCGCCTCGCCTCGCCTCGCCTTCCCCCCGCCGCTCCCGGCCACCACGCCCGCCACTCCTCCCCCCC CTGCCGCCCTCGCGCGTCCTTCCGGGCTAACCTCGTGTGCCTCCCCACCTCTAGCGTCGCCGCCCACAAGCGCCT GCGCACCATGGCCTCGAACGGCGCCGCCGCGTCCCCCGCTAGCTCCCAGGACTGCTCCATCTGCCTCAACTCCAT TGCGGTACGTTCTCCTCCCCCTGCCCGCCGAAGCTTGACTTCACCCGGGGGCGGTCGACCCGAGGCCGCCGAGGC GGACCGTTGAAGCTGACCTCGCTCGCCGCTTCAGCCGTGCCAGTCTCTCTTCGTGGCCCCGTGCTCGCACACGTG GCATTTCAAGTGCGTCCGCTCGCTGCTGATGTCGCCGCAATATCCCATCTTCGTCTGCCCCAACTGCCGCGCCGG CGCCGACCTCGAGGCCGACGTGGAGGAGCCGTCGGAGGAGTGGCAGCAGCTGGAGGACTGCGACGAGGAGGCGTG CGAGCAGGCGTGCGAGGCGGCGCAGGACAAGGCGCCCGCGCGGAGCCCGTCGCCGGCGTCGGTGCCGGAGCCGGC AGACGTGACGGTGCAGGACGCCGACGCCATGGACGTGACGGTCAACGTCGGAGCGCCGGCCGCTCCGGCGTCGCG ATCGACGCCGCCACACGCTTCGACGGAGCCCCTACCCATCAACAGCCCCGCCTCGGGTGCCGGCCGGGTCGGCCA CCTGAGGGAGAACGGGTCCCCGTCGCCGGGCCCCAACGGCGAGGGCCCCATCACGCCGCGTAACAACGCGGGCCC CTGGGTCTTTGACGGGAGCGCGGGTCGCCGAGCCGCCGACGCGACGCTGGAGATGCGAAGTCTCGATGCGGCGGC TGACATGGACGCGCGCGCGGGGGGGCAGAGTGACGACTCGAGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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