Protein ID | Hirsu2|297 |
Gene name | |
Location | Contig_1056:2432..3996 |
Strand | - |
Gene length (bp) | 1564 |
Transcript length (bp) | 1197 |
Coding sequence length (bp) | 1197 |
Protein length (aa) | 399 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | 0.362 | 0.6291 | 0.5652 | 0.0575 | 0.2256 | 0.0335 | 0.1606 | 0.0386 | 0.0931 | 0.0132 |
Orthofinder run ID | 4 |
Orthogroup | 5983 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|297 MGWQNCLHRLPLDGGIVASIACQVADIPDSEIPQGPVEEGVKEDPCDADASAITNLQITDAELDALQSRFLHGTP ESEHVADLEHMPPSAQAQHRIPLPSIRKTPVDEFNRSQPLSTLAFPTLYPDGKADFVEPRLRSITHQDYLAHAMR VESSPEAARMVLSQQLLRDNAHIAAYHLHKRYTLFRTIVLKRKFNLTDFWARYECQGRGSSHHHGPYWLSGHPDL DPGDDRSRERFARIWGYHVSAVNSDKAQGLIPREKSVVNSSRAYSIYVNAQVVATKQNDLRRNRQMGGRFHQISV ESTLLLAVFAKAADMFAYVLAVSKLSAFGKLTRYRDPKKVDEPTFAVLASRARGDIPKELRDVCHFLTTKVEEAI CSGAPYSQYLGQDMTNQIREHLT* |
Coding | >Hirsu2|297 ATGGGTTGGCAGAATTGCCTGCATCGGCTTCCTCTTGACGGCGGCATAGTTGCTTCCATTGCTTGCCAAGTGGCT GACATACCTGACAGCGAGATCCCCCAAGGCCCCGTTGAGGAGGGAGTAAAAGAAGATCCTTGCGATGCTGACGCA TCTGCAATCACCAACTTGCAAATTACCGACGCCGAATTAGACGCGCTCCAGTCCCGATTCCTTCATGGTACTCCT GAATCTGAACATGTGGCTGATCTTGAGCATATGCCGCCTAGTGCGCAGGCTCAACATCGGATACCACTTCCTTCC ATTCGCAAGACCCCTGTCGACGAATTCAACCGTTCCCAGCCGCTATCAACCCTCGCGTTCCCTACTCTCTACCCC GACGGTAAGGCAGACTTCGTGGAGCCTCGTCTACGGAGCATCACCCACCAAGACTATCTTGCACATGCGATGAGA GTGGAAAGCAGCCCTGAGGCGGCGCGGATGGTCCTGTCCCAACAACTACTTCGAGACAATGCCCACATTGCCGCT TACCACCTTCATAAGCGTTACACGCTGTTTAGGACTATTGTCCTTAAGCGAAAGTTCAACCTAACGGATTTTTGG GCTCGCTACGAGTGCCAGGGCAGAGGGTCCAGTCACCACCATGGCCCGTATTGGTTAAGCGGCCACCCAGACTTG GATCCTGGCGATGATCGGTCCCGGGAGCGGTTCGCACGAATCTGGGGTTATCACGTATCTGCTGTCAACTCAGAT AAGGCCCAAGGATTGATTCCCCGTGAAAAGAGTGTCGTCAATAGTTCTCGTGCCTATAGCATATATGTTAATGCC CAGGTTGTGGCTACCAAACAGAACGATCTCCGGCGCAACAGGCAAATGGGCGGGCGCTTTCATCAAATTTCAGTT GAATCCACTCTTCTTCTGGCCGTCTTCGCCAAAGCAGCGGACATGTTCGCGTACGTACTTGCTGTTTCGAAACTT TCAGCTTTTGGAAAGCTCACCCGCTACAGGGATCCAAAGAAAGTGGACGAGCCTACTTTCGCAGTTTTGGCCTCC CGAGCTCGTGGGGACATTCCGAAGGAGCTGCGAGACGTCTGTCACTTTTTAACCACCAAGGTAGAGGAAGCGATA TGTTCAGGGGCCCCTTACAGTCAATATCTGGGGCAAGATATGACGAATCAAATTAGAGAGCACTTGACCTAG |
Transcript | >Hirsu2|297 ATGGGTTGGCAGAATTGCCTGCATCGGCTTCCTCTTGACGGCGGCATAGTTGCTTCCATTGCTTGCCAAGTGGCT GACATACCTGACAGCGAGATCCCCCAAGGCCCCGTTGAGGAGGGAGTAAAAGAAGATCCTTGCGATGCTGACGCA TCTGCAATCACCAACTTGCAAATTACCGACGCCGAATTAGACGCGCTCCAGTCCCGATTCCTTCATGGTACTCCT GAATCTGAACATGTGGCTGATCTTGAGCATATGCCGCCTAGTGCGCAGGCTCAACATCGGATACCACTTCCTTCC ATTCGCAAGACCCCTGTCGACGAATTCAACCGTTCCCAGCCGCTATCAACCCTCGCGTTCCCTACTCTCTACCCC GACGGTAAGGCAGACTTCGTGGAGCCTCGTCTACGGAGCATCACCCACCAAGACTATCTTGCACATGCGATGAGA GTGGAAAGCAGCCCTGAGGCGGCGCGGATGGTCCTGTCCCAACAACTACTTCGAGACAATGCCCACATTGCCGCT TACCACCTTCATAAGCGTTACACGCTGTTTAGGACTATTGTCCTTAAGCGAAAGTTCAACCTAACGGATTTTTGG GCTCGCTACGAGTGCCAGGGCAGAGGGTCCAGTCACCACCATGGCCCGTATTGGTTAAGCGGCCACCCAGACTTG GATCCTGGCGATGATCGGTCCCGGGAGCGGTTCGCACGAATCTGGGGTTATCACGTATCTGCTGTCAACTCAGAT AAGGCCCAAGGATTGATTCCCCGTGAAAAGAGTGTCGTCAATAGTTCTCGTGCCTATAGCATATATGTTAATGCC CAGGTTGTGGCTACCAAACAGAACGATCTCCGGCGCAACAGGCAAATGGGCGGGCGCTTTCATCAAATTTCAGTT GAATCCACTCTTCTTCTGGCCGTCTTCGCCAAAGCAGCGGACATGTTCGCGTACGTACTTGCTGTTTCGAAACTT TCAGCTTTTGGAAAGCTCACCCGCTACAGGGATCCAAAGAAAGTGGACGAGCCTACTTTCGCAGTTTTGGCCTCC CGAGCTCGTGGGGACATTCCGAAGGAGCTGCGAGACGTCTGTCACTTTTTAACCACCAAGGTAGAGGAAGCGATA TGTTCAGGGGCCCCTTACAGTCAATATCTGGGGCAAGATATGACGAATCAAATTAGAGAGCACTTGACCTAG |
Gene | >Hirsu2|297 ATGGGTTGGCAGAATTGCCTGCATCGGCTTCCTCTTGACGGCGGCATAGTTGCTTCCATTGCTTGCCAAGTGGCT GACATACCTGACAGCGAGATCCCCCAAGGCCCCGTTGAGGAGGGAGTAAAAGAAGATCCTTGCGATGCTGACGCA TCTGCAATCACCAACTTGCAAATTACCGACGCCGAATTAGACGCGCTCCAGTCCCGATTCCTTCATGGTACTCCT GAATCTGAACATGTGGCTGATCTTGAGCATATGCCGCCTAGTGCGCAGGCTCAACATCGGATACCACTTCCTTCC ATTCGCAAGACCCCTGTCGACGAATTCAACCGTTCCCAGCCGCTATCAACCCTCGCGTTCCCTACTCTCTACCCC GACGGTAAGGCAGACTTCGTGGAGCCTCGTCTACGGAGCATCACCCACCAAGACTATCTTGCACATGCGATGAGG TGGCAAGACGGACGTTTTTCTCGCCATAAGACGTGGCTTTTGTCGCCCTCAACACGTTGTTACGTGCGCAGGTGC GAAAGCGAAGCGACTACTTCGTCAAGCAACGAAACGGCCGCCATGAGGCCCTCACACGCGTCGATCTGGAGGAAG TAATGGCTAAGCCTGACGAGCCAGAGGCCCAGGCTCTGATCCAGTCGATCACGCGCCTAGCCGTTATAATCAGGG GCACTCGGCCATATTGGTATAAGCAAAGGAAGGAATTGGAGGCATATGCCTACAACCTAGGCAGACCTGGACTTT TCGTTACTGCAAGTGCGGCCTATTACCACTGGGAATCCCTATACCGTCATATGCCTCGATTCCAAGAGTGGAAAG CAGCCCTGAGGCGGCGCGGATGGTCCTGTCCCAACAACTACTTCGAGACAATGCCCACATTGCCGCTTACCACCT TCATAAGCGTTACACGCTGTTTAGGACTATTGTCCTTAAGCGAAAGTTCAACCTAACGGATTTTTGGGCTCGCTA CGAGTGCCAGGGCAGAGGGTCCAGTCACCACCATGGCCCGTATTGGTTAAGCGGCCACCCAGACTTGGATCCTGG CGATGATCGGTCCCGGGAGCGGTTCGCACGAATCTGGGGTTATCACGTATCTGCTGTCAACTCAGATAAGGCCCA AGGATTGATTCCCCGTGAAAAGAGTGTCGTCAATAGTTCTCGTGCCTATAGCATATATGTTAATGCCCAGGTTGT GGCTACCAAACAGAACGATCTCCGGCGCAACAGGCAAATGGGCGGGCGCTTTCATCAAATTTCAGTTGAATCCAC TCTTCTTCTGGCCGTCTTCGCCAAAGCAGCGGACATGTTCGCGTACGTACTTGCTGTTTCGAAACTTTCAGCTTT TGGAAAGCTCACCCGCTACAGGGATCCAAAGAAAGTGGACGAGCCTACTTTCGCAGTTTTGGCCTCCCGAGCTCG TGGGGACATTCCGAAGGAGCTGCGAGACGTCTGTCACTTTTTAACCACCAAGGTAGAGGAAGCGATATGTTCAGG GGCCCCTTACAGTCAATATCTGGGGCAAGATATGACGAATCAAATTAGAGAGCACTTGACCTAG |