Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|297
Gene name
LocationContig_1056:2432..3996
Strand-
Gene length (bp)1564
Transcript length (bp)1197
Coding sequence length (bp)1197
Protein length (aa) 399

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14214 Helitron_like_N Helitron helicase-like domain at N-terminus 8.2E-08 162 215

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|297
MGWQNCLHRLPLDGGIVASIACQVADIPDSEIPQGPVEEGVKEDPCDADASAITNLQITDAELDALQSRFLHGTP
ESEHVADLEHMPPSAQAQHRIPLPSIRKTPVDEFNRSQPLSTLAFPTLYPDGKADFVEPRLRSITHQDYLAHAMR
VESSPEAARMVLSQQLLRDNAHIAAYHLHKRYTLFRTIVLKRKFNLTDFWARYECQGRGSSHHHGPYWLSGHPDL
DPGDDRSRERFARIWGYHVSAVNSDKAQGLIPREKSVVNSSRAYSIYVNAQVVATKQNDLRRNRQMGGRFHQISV
ESTLLLAVFAKAADMFAYVLAVSKLSAFGKLTRYRDPKKVDEPTFAVLASRARGDIPKELRDVCHFLTTKVEEAI
CSGAPYSQYLGQDMTNQIREHLT*
Coding >Hirsu2|297
ATGGGTTGGCAGAATTGCCTGCATCGGCTTCCTCTTGACGGCGGCATAGTTGCTTCCATTGCTTGCCAAGTGGCT
GACATACCTGACAGCGAGATCCCCCAAGGCCCCGTTGAGGAGGGAGTAAAAGAAGATCCTTGCGATGCTGACGCA
TCTGCAATCACCAACTTGCAAATTACCGACGCCGAATTAGACGCGCTCCAGTCCCGATTCCTTCATGGTACTCCT
GAATCTGAACATGTGGCTGATCTTGAGCATATGCCGCCTAGTGCGCAGGCTCAACATCGGATACCACTTCCTTCC
ATTCGCAAGACCCCTGTCGACGAATTCAACCGTTCCCAGCCGCTATCAACCCTCGCGTTCCCTACTCTCTACCCC
GACGGTAAGGCAGACTTCGTGGAGCCTCGTCTACGGAGCATCACCCACCAAGACTATCTTGCACATGCGATGAGA
GTGGAAAGCAGCCCTGAGGCGGCGCGGATGGTCCTGTCCCAACAACTACTTCGAGACAATGCCCACATTGCCGCT
TACCACCTTCATAAGCGTTACACGCTGTTTAGGACTATTGTCCTTAAGCGAAAGTTCAACCTAACGGATTTTTGG
GCTCGCTACGAGTGCCAGGGCAGAGGGTCCAGTCACCACCATGGCCCGTATTGGTTAAGCGGCCACCCAGACTTG
GATCCTGGCGATGATCGGTCCCGGGAGCGGTTCGCACGAATCTGGGGTTATCACGTATCTGCTGTCAACTCAGAT
AAGGCCCAAGGATTGATTCCCCGTGAAAAGAGTGTCGTCAATAGTTCTCGTGCCTATAGCATATATGTTAATGCC
CAGGTTGTGGCTACCAAACAGAACGATCTCCGGCGCAACAGGCAAATGGGCGGGCGCTTTCATCAAATTTCAGTT
GAATCCACTCTTCTTCTGGCCGTCTTCGCCAAAGCAGCGGACATGTTCGCGTACGTACTTGCTGTTTCGAAACTT
TCAGCTTTTGGAAAGCTCACCCGCTACAGGGATCCAAAGAAAGTGGACGAGCCTACTTTCGCAGTTTTGGCCTCC
CGAGCTCGTGGGGACATTCCGAAGGAGCTGCGAGACGTCTGTCACTTTTTAACCACCAAGGTAGAGGAAGCGATA
TGTTCAGGGGCCCCTTACAGTCAATATCTGGGGCAAGATATGACGAATCAAATTAGAGAGCACTTGACCTAG
Transcript >Hirsu2|297
ATGGGTTGGCAGAATTGCCTGCATCGGCTTCCTCTTGACGGCGGCATAGTTGCTTCCATTGCTTGCCAAGTGGCT
GACATACCTGACAGCGAGATCCCCCAAGGCCCCGTTGAGGAGGGAGTAAAAGAAGATCCTTGCGATGCTGACGCA
TCTGCAATCACCAACTTGCAAATTACCGACGCCGAATTAGACGCGCTCCAGTCCCGATTCCTTCATGGTACTCCT
GAATCTGAACATGTGGCTGATCTTGAGCATATGCCGCCTAGTGCGCAGGCTCAACATCGGATACCACTTCCTTCC
ATTCGCAAGACCCCTGTCGACGAATTCAACCGTTCCCAGCCGCTATCAACCCTCGCGTTCCCTACTCTCTACCCC
GACGGTAAGGCAGACTTCGTGGAGCCTCGTCTACGGAGCATCACCCACCAAGACTATCTTGCACATGCGATGAGA
GTGGAAAGCAGCCCTGAGGCGGCGCGGATGGTCCTGTCCCAACAACTACTTCGAGACAATGCCCACATTGCCGCT
TACCACCTTCATAAGCGTTACACGCTGTTTAGGACTATTGTCCTTAAGCGAAAGTTCAACCTAACGGATTTTTGG
GCTCGCTACGAGTGCCAGGGCAGAGGGTCCAGTCACCACCATGGCCCGTATTGGTTAAGCGGCCACCCAGACTTG
GATCCTGGCGATGATCGGTCCCGGGAGCGGTTCGCACGAATCTGGGGTTATCACGTATCTGCTGTCAACTCAGAT
AAGGCCCAAGGATTGATTCCCCGTGAAAAGAGTGTCGTCAATAGTTCTCGTGCCTATAGCATATATGTTAATGCC
CAGGTTGTGGCTACCAAACAGAACGATCTCCGGCGCAACAGGCAAATGGGCGGGCGCTTTCATCAAATTTCAGTT
GAATCCACTCTTCTTCTGGCCGTCTTCGCCAAAGCAGCGGACATGTTCGCGTACGTACTTGCTGTTTCGAAACTT
TCAGCTTTTGGAAAGCTCACCCGCTACAGGGATCCAAAGAAAGTGGACGAGCCTACTTTCGCAGTTTTGGCCTCC
CGAGCTCGTGGGGACATTCCGAAGGAGCTGCGAGACGTCTGTCACTTTTTAACCACCAAGGTAGAGGAAGCGATA
TGTTCAGGGGCCCCTTACAGTCAATATCTGGGGCAAGATATGACGAATCAAATTAGAGAGCACTTGACCTAG
Gene >Hirsu2|297
ATGGGTTGGCAGAATTGCCTGCATCGGCTTCCTCTTGACGGCGGCATAGTTGCTTCCATTGCTTGCCAAGTGGCT
GACATACCTGACAGCGAGATCCCCCAAGGCCCCGTTGAGGAGGGAGTAAAAGAAGATCCTTGCGATGCTGACGCA
TCTGCAATCACCAACTTGCAAATTACCGACGCCGAATTAGACGCGCTCCAGTCCCGATTCCTTCATGGTACTCCT
GAATCTGAACATGTGGCTGATCTTGAGCATATGCCGCCTAGTGCGCAGGCTCAACATCGGATACCACTTCCTTCC
ATTCGCAAGACCCCTGTCGACGAATTCAACCGTTCCCAGCCGCTATCAACCCTCGCGTTCCCTACTCTCTACCCC
GACGGTAAGGCAGACTTCGTGGAGCCTCGTCTACGGAGCATCACCCACCAAGACTATCTTGCACATGCGATGAGG
TGGCAAGACGGACGTTTTTCTCGCCATAAGACGTGGCTTTTGTCGCCCTCAACACGTTGTTACGTGCGCAGGTGC
GAAAGCGAAGCGACTACTTCGTCAAGCAACGAAACGGCCGCCATGAGGCCCTCACACGCGTCGATCTGGAGGAAG
TAATGGCTAAGCCTGACGAGCCAGAGGCCCAGGCTCTGATCCAGTCGATCACGCGCCTAGCCGTTATAATCAGGG
GCACTCGGCCATATTGGTATAAGCAAAGGAAGGAATTGGAGGCATATGCCTACAACCTAGGCAGACCTGGACTTT
TCGTTACTGCAAGTGCGGCCTATTACCACTGGGAATCCCTATACCGTCATATGCCTCGATTCCAAGAGTGGAAAG
CAGCCCTGAGGCGGCGCGGATGGTCCTGTCCCAACAACTACTTCGAGACAATGCCCACATTGCCGCTTACCACCT
TCATAAGCGTTACACGCTGTTTAGGACTATTGTCCTTAAGCGAAAGTTCAACCTAACGGATTTTTGGGCTCGCTA
CGAGTGCCAGGGCAGAGGGTCCAGTCACCACCATGGCCCGTATTGGTTAAGCGGCCACCCAGACTTGGATCCTGG
CGATGATCGGTCCCGGGAGCGGTTCGCACGAATCTGGGGTTATCACGTATCTGCTGTCAACTCAGATAAGGCCCA
AGGATTGATTCCCCGTGAAAAGAGTGTCGTCAATAGTTCTCGTGCCTATAGCATATATGTTAATGCCCAGGTTGT
GGCTACCAAACAGAACGATCTCCGGCGCAACAGGCAAATGGGCGGGCGCTTTCATCAAATTTCAGTTGAATCCAC
TCTTCTTCTGGCCGTCTTCGCCAAAGCAGCGGACATGTTCGCGTACGTACTTGCTGTTTCGAAACTTTCAGCTTT
TGGAAAGCTCACCCGCTACAGGGATCCAAAGAAAGTGGACGAGCCTACTTTCGCAGTTTTGGCCTCCCGAGCTCG
TGGGGACATTCCGAAGGAGCTGCGAGACGTCTGTCACTTTTTAACCACCAAGGTAGAGGAAGCGATATGTTCAGG
GGCCCCTTACAGTCAATATCTGGGGCAAGATATGACGAATCAAATTAGAGAGCACTTGACCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail