Protein ID | Hirsu2|2948 |
Gene name | |
Location | Contig_174:10667..12725 |
Strand | + |
Gene length (bp) | 2058 |
Transcript length (bp) | 1998 |
Coding sequence length (bp) | 1998 |
Protein length (aa) | 666 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 24 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 106 | 128 | 22 |
2 | 143 | 165 | 22 |
3 | 211 | 233 | 22 |
4 | 564 | 586 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2948 MPSSDGAQNGLLMPLESRRGGASEESSSDARSESQVERQDVALDDAAANRTACRIPGASVSPSHSLPETEPQAQF QSHESPLSDPSPNHSRSPGPSLGAWEIGWRYPALLLGLFAGTLLVATGHHMFYKLLDGELVESTIPQMWAIRIGN GLAFLFKGGVVAILSIVNTQQIWTILRRKFIPLRGIDGMFRLMTDPTALFNRHLWVQAKTLLLLASLAWLVPLVA VVTPATLSVRSSTQSNAIPFSVPTVKFDSAADEVHTTRSKSLDEILRGSHSDVSRLLAAVAATVSYVPWTLPFPN SSYELSFWAPSYKCVNISEAMAQQNAQFMSGSRPDNHSSFQPDLDAYRGELSVPPPSIHGNVFQVTSNPMAIAIQ SSVFESEAKASLRYTSLVCQLYNTSFEIFVRFENGVQSIAPRSVQYLNPVQHLHPDYFSGVGMLSYKSGRNTRLT APSLIHRSFTDFLVGNITISSDILSVDGTSLMRSGLAGCVEMANAMRYDAYSDNDYYPELCRNKTLARAIEDLSR NLTYSFMAPTYNLSHHYATVPVTISSLRNFYAYDRSTLITTYLASLSVVLLWMGVGALALWRNGITSSASFSTIL CTTRNPDLDTLARGHSLGADPLPDDIAGVKLKFGYLQAGDGKPVGHAGFGLQGTVTTVKKVDELL* |
Coding | >Hirsu2|2948 ATGCCCTCCTCCGACGGAGCCCAGAACGGGTTGCTTATGCCGCTCGAATCTAGACGTGGCGGGGCCTCTGAAGAG AGTAGCTCTGACGCCAGATCGGAGAGCCAAGTTGAGCGGCAAGACGTGGCTCTTGATGATGCTGCTGCAAATCGA ACGGCCTGCCGTATCCCTGGTGCCTCGGTATCACCGTCTCACTCGTTACCCGAAACAGAGCCTCAGGCACAGTTC CAGTCACATGAAAGCCCTCTATCCGACCCATCTCCGAACCATTCCCGGTCTCCCGGCCCTTCGCTCGGCGCCTGG GAAATAGGCTGGCGCTATCCTGCGCTGCTGCTCGGCCTCTTTGCGGGCACCCTACTCGTGGCCACGGGCCACCAT ATGTTCTACAAGCTCTTGGATGGGGAGCTTGTGGAGTCTACTATCCCACAGATGTGGGCTATTCGAATTGGAAAC GGCCTCGCCTTTTTATTCAAAGGGGGCGTGGTCGCGATACTCAGCATCGTGAACACCCAGCAGATATGGACTATA CTGAGGCGAAAATTCATCCCGCTTCGGGGCATCGACGGCATGTTTAGACTTATGACCGATCCGACCGCTCTCTTC AACCGTCATCTATGGGTCCAAGCCAAGACGCTGCTGCTGCTGGCGAGCCTCGCGTGGCTCGTACCACTCGTCGCT GTCGTCACGCCAGCAACACTCTCCGTGAGGTCGTCAACACAGTCAAACGCAATCCCGTTTTCGGTACCTACAGTC AAGTTCGACTCGGCTGCCGACGAGGTCCATACAACGCGGAGTAAATCTCTTGATGAAATCTTGCGAGGTTCACAT TCGGATGTCTCTCGGCTTCTAGCCGCCGTGGCCGCGACCGTTTCTTACGTACCGTGGACGTTACCCTTTCCTAAC TCGTCATACGAGTTAAGCTTTTGGGCTCCGTCATATAAATGCGTCAACATTAGCGAAGCCATGGCTCAGCAGAAT GCGCAGTTCATGTCCGGAAGCAGACCTGATAATCACTCGTCGTTTCAACCAGACCTGGATGCGTACCGGGGGGAG CTGAGCGTCCCTCCCCCCTCGATACACGGCAATGTATTCCAAGTCACCTCGAATCCTATGGCCATTGCTATACAG TCAAGTGTTTTTGAAAGCGAAGCTAAAGCCTCTCTGCGATACACATCTCTGGTTTGCCAGCTTTACAATACCTCG TTCGAGATATTCGTGCGCTTTGAAAATGGCGTCCAGTCAATAGCGCCTCGATCGGTTCAATATCTGAATCCGGTT CAACATCTGCATCCAGACTACTTCTCCGGCGTGGGGATGCTTTCTTATAAGTCTGGCAGAAACACTAGGCTGACA GCCCCTTCGTTGATACATCGCTCCTTCACAGATTTTCTGGTGGGAAACATAACGATATCCTCTGACATTTTGTCC GTTGACGGGACGTCCTTGATGCGATCGGGGTTGGCGGGCTGCGTCGAGATGGCGAATGCCATGAGATACGACGCC TATTCTGACAACGACTACTACCCCGAATTATGCCGCAACAAGACCTTGGCTAGAGCTATCGAGGATCTATCGAGA AACTTGACGTATAGCTTCATGGCACCTACGTATAACCTTAGCCACCATTACGCCACGGTCCCCGTTACTATATCA TCTCTCCGAAATTTCTACGCTTACGACCGATCAACATTGATAACTACGTACCTCGCAAGCTTATCAGTCGTGTTG CTCTGGATGGGCGTCGGGGCTTTAGCGCTATGGAGAAACGGCATCACCAGCAGCGCGTCTTTCTCTACCATCCTG TGCACCACGAGGAACCCCGACCTCGACACCCTCGCCCGGGGTCATTCCTTGGGGGCGGATCCGCTGCCGGACGAC ATCGCGGGTGTTAAGCTGAAATTCGGCTATTTGCAGGCGGGAGATGGCAAACCGGTAGGCCATGCTGGGTTTGGC TTGCAAGGAACGGTGACGACGGTGAAGAAGGTAGATGAGTTGCTGTGA |
Transcript | >Hirsu2|2948 ATGCCCTCCTCCGACGGAGCCCAGAACGGGTTGCTTATGCCGCTCGAATCTAGACGTGGCGGGGCCTCTGAAGAG AGTAGCTCTGACGCCAGATCGGAGAGCCAAGTTGAGCGGCAAGACGTGGCTCTTGATGATGCTGCTGCAAATCGA ACGGCCTGCCGTATCCCTGGTGCCTCGGTATCACCGTCTCACTCGTTACCCGAAACAGAGCCTCAGGCACAGTTC CAGTCACATGAAAGCCCTCTATCCGACCCATCTCCGAACCATTCCCGGTCTCCCGGCCCTTCGCTCGGCGCCTGG GAAATAGGCTGGCGCTATCCTGCGCTGCTGCTCGGCCTCTTTGCGGGCACCCTACTCGTGGCCACGGGCCACCAT ATGTTCTACAAGCTCTTGGATGGGGAGCTTGTGGAGTCTACTATCCCACAGATGTGGGCTATTCGAATTGGAAAC GGCCTCGCCTTTTTATTCAAAGGGGGCGTGGTCGCGATACTCAGCATCGTGAACACCCAGCAGATATGGACTATA CTGAGGCGAAAATTCATCCCGCTTCGGGGCATCGACGGCATGTTTAGACTTATGACCGATCCGACCGCTCTCTTC AACCGTCATCTATGGGTCCAAGCCAAGACGCTGCTGCTGCTGGCGAGCCTCGCGTGGCTCGTACCACTCGTCGCT GTCGTCACGCCAGCAACACTCTCCGTGAGGTCGTCAACACAGTCAAACGCAATCCCGTTTTCGGTACCTACAGTC AAGTTCGACTCGGCTGCCGACGAGGTCCATACAACGCGGAGTAAATCTCTTGATGAAATCTTGCGAGGTTCACAT TCGGATGTCTCTCGGCTTCTAGCCGCCGTGGCCGCGACCGTTTCTTACGTACCGTGGACGTTACCCTTTCCTAAC TCGTCATACGAGTTAAGCTTTTGGGCTCCGTCATATAAATGCGTCAACATTAGCGAAGCCATGGCTCAGCAGAAT GCGCAGTTCATGTCCGGAAGCAGACCTGATAATCACTCGTCGTTTCAACCAGACCTGGATGCGTACCGGGGGGAG CTGAGCGTCCCTCCCCCCTCGATACACGGCAATGTATTCCAAGTCACCTCGAATCCTATGGCCATTGCTATACAG TCAAGTGTTTTTGAAAGCGAAGCTAAAGCCTCTCTGCGATACACATCTCTGGTTTGCCAGCTTTACAATACCTCG TTCGAGATATTCGTGCGCTTTGAAAATGGCGTCCAGTCAATAGCGCCTCGATCGGTTCAATATCTGAATCCGGTT CAACATCTGCATCCAGACTACTTCTCCGGCGTGGGGATGCTTTCTTATAAGTCTGGCAGAAACACTAGGCTGACA GCCCCTTCGTTGATACATCGCTCCTTCACAGATTTTCTGGTGGGAAACATAACGATATCCTCTGACATTTTGTCC GTTGACGGGACGTCCTTGATGCGATCGGGGTTGGCGGGCTGCGTCGAGATGGCGAATGCCATGAGATACGACGCC TATTCTGACAACGACTACTACCCCGAATTATGCCGCAACAAGACCTTGGCTAGAGCTATCGAGGATCTATCGAGA AACTTGACGTATAGCTTCATGGCACCTACGTATAACCTTAGCCACCATTACGCCACGGTCCCCGTTACTATATCA TCTCTCCGAAATTTCTACGCTTACGACCGATCAACATTGATAACTACGTACCTCGCAAGCTTATCAGTCGTGTTG CTCTGGATGGGCGTCGGGGCTTTAGCGCTATGGAGAAACGGCATCACCAGCAGCGCGTCTTTCTCTACCATCCTG TGCACCACGAGGAACCCCGACCTCGACACCCTCGCCCGGGGTCATTCCTTGGGGGCGGATCCGCTGCCGGACGAC ATCGCGGGTGTTAAGCTGAAATTCGGCTATTTGCAGGCGGGAGATGGCAAACCGGTAGGCCATGCTGGGTTTGGC TTGCAAGGAACGGTGACGACGGTGAAGAAGGTAGATGAGTTGCTGTGA |
Gene | >Hirsu2|2948 ATGCCCTCCTCCGACGGAGCCCAGAACGGGTTGCTTATGCCGCTCGAATCTAGACGTGGCGGGGCCTCTGAAGAG AGTAGCTCTGACGCCAGATCGGAGAGCCAAGTTGAGCGGCAAGACGTGGCTCTTGATGATGCTGCTGCAAATCGA ACGGCCTGCCGTATCCCTGGTGCCTCGGTATCACCGTCTCACTCGTTACCCGAAACAGAGCCTCAGGCACAGTTC CAGTCACATGAAAGCCCTCTATCCGACCCATCTCCGAACCATTCCCGGTCTCCCGGCCCTTCGCTCGGCGCCTGG GAAATAGGCTGGCGCTATCCTGCGCTGCTGCTCGGCCTCTTTGCGGGCACCCTACTCGTGGCCACGGGCCACCAT ATGTTCTACAAGCTCTTGGATGGGGAGCTTGTGGAGTCTACTATCCCACAGATGTGGGCTATTCGAATTGGAAAC GGCCTCGCCTTTTTATTCAAAGGGGGCGTGGTCGCGATACTCAGCATCGTGAACACCCAGCAGATATGGACTATA CTGAGGCGAAAATTCATCCCGCTTCGGGGCATCGACGGCATGTTTAGACTTATGACCGATCCGACCGCTCTCTTC AACCGTCATCTATGGGTCCAAGCCAAGACGCTGCTGCTGCTGGCGAGCCTCGCGTGGTGAGCTGAGCCATAGTGT GCATAACGCTGAGCATGGACCTAACGTTGAACCGTTCACAGGCTCGTACCACTCGTCGCTGTCGTCACGCCAGCA ACACTCTCCGTGAGGTCGTCAACACAGTCAAACGCAATCCCGTTTTCGGTACCTACAGTCAAGTTCGACTCGGCT GCCGACGAGGTCCATACAACGCGGAGTAAATCTCTTGATGAAATCTTGCGAGGTTCACATTCGGATGTCTCTCGG CTTCTAGCCGCCGTGGCCGCGACCGTTTCTTACGTACCGTGGACGTTACCCTTTCCTAACTCGTCATACGAGTTA AGCTTTTGGGCTCCGTCATATAAATGCGTCAACATTAGCGAAGCCATGGCTCAGCAGAATGCGCAGTTCATGTCC GGAAGCAGACCTGATAATCACTCGTCGTTTCAACCAGACCTGGATGCGTACCGGGGGGAGCTGAGCGTCCCTCCC CCCTCGATACACGGCAATGTATTCCAAGTCACCTCGAATCCTATGGCCATTGCTATACAGTCAAGTGTTTTTGAA AGCGAAGCTAAAGCCTCTCTGCGATACACATCTCTGGTTTGCCAGCTTTACAATACCTCGTTCGAGATATTCGTG CGCTTTGAAAATGGCGTCCAGTCAATAGCGCCTCGATCGGTTCAATATCTGAATCCGGTTCAACATCTGCATCCA GACTACTTCTCCGGCGTGGGGATGCTTTCTTATAAGTCTGGCAGAAACACTAGGCTGACAGCCCCTTCGTTGATA CATCGCTCCTTCACAGATTTTCTGGTGGGAAACATAACGATATCCTCTGACATTTTGTCCGTTGACGGGACGTCC TTGATGCGATCGGGGTTGGCGGGCTGCGTCGAGATGGCGAATGCCATGAGATACGACGCCTATTCTGACAACGAC TACTACCCCGAATTATGCCGCAACAAGACCTTGGCTAGAGCTATCGAGGATCTATCGAGAAACTTGACGTATAGC TTCATGGCACCTACGTATAACCTTAGCCACCATTACGCCACGGTCCCCGTTACTATATCATCTCTCCGAAATTTC TACGCTTACGACCGATCAACATTGATAACTACGTACCTCGCAAGCTTATCAGTCGTGTTGCTCTGGATGGGCGTC GGGGCTTTAGCGCTATGGAGAAACGGCATCACCAGCAGCGCGTCTTTCTCTACCATCCTGTGCACCACGAGGAAC CCCGACCTCGACACCCTCGCCCGGGGTCATTCCTTGGGGGCGGATCCGCTGCCGGACGACATCGCGGGTGTTAAG CTGAAATTCGGCTATTTGCAGGCGGGAGATGGCAAACCGGTAGGCCATGCTGGGTTTGGCTTGCAAGGAACGGTG ACGACGGTGAAGAAGGTAGATGAGTTGCTGTGA |