Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2943
Gene name
LocationContig_1738:178..734
Strand-
Gene length (bp)556
Transcript length (bp)417
Coding sequence length (bp)417
Protein length (aa) 139

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00085 Thioredoxin Thioredoxin 2.0E-13 45 136

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P40557|EPS1_YEAST ER-retained PMA1-suppressing protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EPS1 PE=1 SV=1 41 132 3.0E-09
sp|P21195|PDIA1_RABIT Protein disulfide-isomerase OS=Oryctolagus cuniculus GN=P4HB PE=2 SV=1 1 136 3.0E-08
sp|P38658|ERP60_SCHMA Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1 44 136 6.0E-07
sp|Q54EN4|PDI2_DICDI Protein disulfide-isomerase 2 OS=Dictyostelium discoideum GN=pdi2 PE=3 SV=1 46 136 1.0E-06
sp|P05307|PDIA1_BOVIN Protein disulfide-isomerase OS=Bos taurus GN=P4HB PE=1 SV=1 46 136 2.0E-06
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P40557|EPS1_YEAST ER-retained PMA1-suppressing protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EPS1 PE=1 SV=1 41 132 3.0E-09
sp|P21195|PDIA1_RABIT Protein disulfide-isomerase OS=Oryctolagus cuniculus GN=P4HB PE=2 SV=1 1 136 3.0E-08
sp|P38658|ERP60_SCHMA Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1 44 136 6.0E-07
sp|Q54EN4|PDI2_DICDI Protein disulfide-isomerase 2 OS=Dictyostelium discoideum GN=pdi2 PE=3 SV=1 46 136 1.0E-06
sp|P05307|PDIA1_BOVIN Protein disulfide-isomerase OS=Bos taurus GN=P4HB PE=1 SV=1 46 136 2.0E-06
sp|Q91W90|TXND5_MOUSE Thioredoxin domain-containing protein 5 OS=Mus musculus GN=Txndc5 PE=1 SV=2 23 137 3.0E-06
sp|Q8NBS9|TXND5_HUMAN Thioredoxin domain-containing protein 5 OS=Homo sapiens GN=TXNDC5 PE=1 SV=2 23 137 3.0E-06
sp|P07237|PDIA1_HUMAN Protein disulfide-isomerase OS=Homo sapiens GN=P4HB PE=1 SV=3 46 136 3.0E-06
sp|Q2HWU2|PDIA1_MACFU Protein disulfide-isomerase OS=Macaca fuscata fuscata GN=P4HB PE=2 SV=1 46 136 3.0E-06
sp|Q6NRT6|DJC10_XENLA DnaJ homolog subfamily C member 10 OS=Xenopus laevis GN=dnajc10 PE=2 SV=1 46 132 9.0E-06
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0945 0.0466 0.912 0.0679 0.1557 0.0051 0.4883 0.3798 0.1915 0.0019

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.999731

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9214
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|2943 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2943
MRLNLLALVVALAARAWAESDEEEEREPEPQPTIFNSVTVPPPFELTPTNWEHEVKKTKWLIVKHYSPYCPHCID
FLPVYQTAYEFYHTSKSPDGKPFADEYDFRFAVINCVAHSEFCEDHNVKSWPTTVIYKDGERR*
Coding >Hirsu2|2943
ATGAGGCTGAACTTGTTGGCCCTCGTCGTCGCCCTCGCCGCCCGCGCCTGGGCCGAGTCGGACGAGGAAGAAGAG
CGCGAACCCGAGCCGCAGCCGACCATCTTCAACTCCGTCACCGTCCCTCCCCCCTTTGAGCTCACGCCCACCAAC
TGGGAGCACGAGGTCAAGAAGACGAAGTGGCTGATCGTCAAGCACTACAGCCCCTATTGCCCTCACTGCATCGAC
TTCCTCCCCGTCTACCAGACCGCATACGAGTTCTATCACACCTCCAAGTCGCCCGACGGCAAGCCCTTCGCCGAC
GAGTACGACTTCCGTTTCGCCGTCATCAACTGCGTCGCCCACTCCGAATTCTGCGAAGACCATAATGTCAAGTCG
TGGCCGACCACCGTCATCTACAAAGACGGAGAGAGGCGCTAG
Transcript >Hirsu2|2943
ATGAGGCTGAACTTGTTGGCCCTCGTCGTCGCCCTCGCCGCCCGCGCCTGGGCCGAGTCGGACGAGGAAGAAGAG
CGCGAACCCGAGCCGCAGCCGACCATCTTCAACTCCGTCACCGTCCCTCCCCCCTTTGAGCTCACGCCCACCAAC
TGGGAGCACGAGGTCAAGAAGACGAAGTGGCTGATCGTCAAGCACTACAGCCCCTATTGCCCTCACTGCATCGAC
TTCCTCCCCGTCTACCAGACCGCATACGAGTTCTATCACACCTCCAAGTCGCCCGACGGCAAGCCCTTCGCCGAC
GAGTACGACTTCCGTTTCGCCGTCATCAACTGCGTCGCCCACTCCGAATTCTGCGAAGACCATAATGTCAAGTCG
TGGCCGACCACCGTCATCTACAAAGACGGAGAGAGGCGCTAG
Gene >Hirsu2|2943
ATGAGGCTGAACTTGTTGGCCCTCGTCGTCGCCCTCGCCGCCCGCGCCTGGGCCGAGTCGGACGAGGAAGAAGAG
CGCGAACCCGAGCCGCAGCCGACCATCTTCAACTCCGTCACCGTCCCTCCCCCCTTTGAGCTCACGCCCACCAAC
TGGGAGCACGAGGTCAAGAAGACGAAGTGGCTGATCGTCAAGCACTACAGGTACGCGCCCCTGACTCCCTCCCTA
CCTCTCCTCATGCGCCGCGCCGCCCGCACATACTGACGTCCGACGACGCTCCGCAGCCCCTATTGCCCTCACTGC
ATCGACTTCCTCCCCGTCTACCAGACCGCATACGAGTTCTATCACACCTCCAAGTCGCCCGACGGCAAGCCCTTC
GCCGACGAGTACGACTTCCGTTTCGCCGTCATCAACTGCGTCGCCCACTCCGAATTCTGCGAAGACCATAATGTC
AAGTCGTGGCCGACCACCGTCATCTACAAAGACGGAGAGGTCTTCAAGTCGCTCAAGGGCAACCGGGACATGTCC
AAGCTCAGCGCCTTCATCGAAGAGGCGCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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