Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2938
Gene name
LocationContig_1734:400..986
Strand+
Gene length (bp)586
Transcript length (bp)540
Coding sequence length (bp)540
Protein length (aa) 180

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2938
MGEGALAVLTPPLSWPGPVLALSWPGLLTLFLSPLLTFFWLLNRVRAPPAAGPPPPSPVACLLASTRPTPTHNIH
SNDPPALPHWRFPFPAPFCPIPVLLFPAAIRPSHLRASASWQGPSVDARPSAAVATKAAALRRPTPWPSCFDSRD
TRPSALDPLDPRDPDRRETLARLAIALFP*
Coding >Hirsu2|2938
ATGGGGGAGGGGGCACTCGCTGTCCTCACCCCTCCCCTGTCTTGGCCCGGCCCTGTCCTGGCCCTGTCCTGGCCT
GGCCTCCTCACGCTTTTCCTCTCACCTCTCCTCACCTTCTTCTGGCTCCTCAACAGGGTCCGCGCGCCACCCGCC
GCTGGCCCGCCTCCGCCGTCTCCTGTTGCTTGCTTGCTCGCCTCCACACGCCCGACGCCCACGCACAACATACAT
AGTAACGATCCTCCCGCCCTCCCGCACTGGCGCTTCCCCTTCCCGGCTCCCTTTTGTCCCATTCCAGTCCTTCTT
TTCCCTGCGGCCATCCGTCCGTCCCATCTGCGCGCCTCCGCCAGTTGGCAGGGCCCGTCAGTCGACGCTCGACCG
TCAGCAGCTGTTGCGACAAAGGCGGCCGCCCTGCGACGGCCCACCCCTTGGCCCAGCTGTTTTGACTCTCGCGAC
ACACGACCCTCGGCCCTCGACCCTCTCGACCCGCGCGACCCCGACCGTCGCGAGACCCTCGCCCGACTTGCCATC
GCCCTCTTCCCTTGA
Transcript >Hirsu2|2938
ATGGGGGAGGGGGCACTCGCTGTCCTCACCCCTCCCCTGTCTTGGCCCGGCCCTGTCCTGGCCCTGTCCTGGCCT
GGCCTCCTCACGCTTTTCCTCTCACCTCTCCTCACCTTCTTCTGGCTCCTCAACAGGGTCCGCGCGCCACCCGCC
GCTGGCCCGCCTCCGCCGTCTCCTGTTGCTTGCTTGCTCGCCTCCACACGCCCGACGCCCACGCACAACATACAT
AGTAACGATCCTCCCGCCCTCCCGCACTGGCGCTTCCCCTTCCCGGCTCCCTTTTGTCCCATTCCAGTCCTTCTT
TTCCCTGCGGCCATCCGTCCGTCCCATCTGCGCGCCTCCGCCAGTTGGCAGGGCCCGTCAGTCGACGCTCGACCG
TCAGCAGCTGTTGCGACAAAGGCGGCCGCCCTGCGACGGCCCACCCCTTGGCCCAGCTGTTTTGACTCTCGCGAC
ACACGACCCTCGGCCCTCGACCCTCTCGACCCGCGCGACCCCGACCGTCGCGAGACCCTCGCCCGACTTGCCATC
GCCCTCTTCCCTTGA
Gene >Hirsu2|2938
ATGGGGGAGGGGGCGTGGCTCGACTGTCACCCTGTCCTCTCTGCGCACACTCTCCCGCAGACTCGCTGTCCTCAC
CCCTCCCCTGTCTTGGCCCGGCCCTGTCCTGGCCCTGTCCTGGCCTGGCCTCCTCACGCTTTTCCTCTCACCTCT
CCTCACCTTCTTCTGGCTCCTCAACAGGGTCCGCGCGCCACCCGCCGCTGGCCCGCCTCCGCCGTCTCCTGTTGC
TTGCTTGCTCGCCTCCACACGCCCGACGCCCACGCACAACATACATAGTAACGATCCTCCCGCCCTCCCGCACTG
GCGCTTCCCCTTCCCGGCTCCCTTTTGTCCCATTCCAGTCCTTCTTTTCCCTGCGGCCATCCGTCCGTCCCATCT
GCGCGCCTCCGCCAGTTGGCAGGGCCCGTCAGTCGACGCTCGACCGTCAGCAGCTGTTGCGACAAAGGCGGCCGC
CCTGCGACGGCCCACCCCTTGGCCCAGCTGTTTTGACTCTCGCGACACACGACCCTCGGCCCTCGACCCTCTCGA
CCCGCGCGACCCCGACCGTCGCGAGACCCTCGCCCGACTTGCCATCGCCCTCTTCCCTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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