© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2931 |
| Gene name | |
| Location | Contig_1730:1391..2147 |
| Strand | + |
| Gene length (bp) | 756 |
| Transcript length (bp) | 648 |
| Coding sequence length (bp) | 648 |
| Protein length (aa) | 216 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09419 | PGP_phosphatase | Mitochondrial PGP phosphatase | 5.6E-66 | 5 | 179 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P38812|GEP4_YEAST | Phosphatidylglycerophosphatase GEP4, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GEP4 PE=1 SV=1 | 3 | 200 | 6.0E-59 |
| sp|Q9Y7U3|GEP4_SCHPO | Probable phosphatidylglycerophosphatase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gep4 PE=3 SV=2 | 1 | 179 | 1.0E-28 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2931 MNFNISASLNASRLLFRPSLCLPHYTVPTFNDLPIPLDRDIQKDGRKADIKAVVLDKDDCFAYPDTNEVHEPYRQ HFEALKRAYPGRRLLVVSNTAGATGWDKQLKQAAQLEKSTGVFVLAHSAKKPGCGSEVMAYFKQHPETGVTHPSH VAVVGDRLMTDVMLANMMGSWGFWIRDGVVPLRQKSIFSRLERNLASFLAASGAQAPWPQTRTRQ* |
| Coding | >Hirsu2|2931 ATGAACTTCAACATCTCGGCGTCTCTCAACGCCTCGAGGCTGCTCTTCAGGCCTAGCCTATGCCTCCCTCACTAC ACCGTACCCACGTTCAACGACCTGCCCATCCCGCTCGACAGGGACATCCAGAAGGACGGCCGAAAGGCCGACATC AAGGCAGTCGTCCTCGACAAGGACGACTGCTTCGCCTATCCGGACACGAATGAGGTCCATGAGCCGTACAGACAA CACTTCGAGGCGCTCAAGAGAGCGTACCCTGGCCGGCGTCTGCTCGTGGTGTCCAACACCGCCGGCGCCACGGGC TGGGACAAGCAGCTGAAGCAGGCTGCGCAGCTGGAGAAGAGCACCGGCGTCTTCGTCTTGGCTCACTCTGCCAAG AAGCCCGGGTGCGGCTCCGAGGTCATGGCCTACTTCAAGCAGCACCCGGAGACGGGAGTCACTCACCCCTCTCAC GTCGCCGTCGTCGGCGACCGGCTGATGACAGACGTCATGCTGGCCAACATGATGGGCTCTTGGGGGTTCTGGATC AGAGACGGGGTCGTCCCCCTGCGGCAAAAGAGCATCTTCTCCCGATTGGAGCGCAACCTGGCCTCGTTCCTGGCA GCAAGCGGAGCACAAGCCCCGTGGCCTCAGACTCGGACCAGACAGTGA |
| Transcript | >Hirsu2|2931 ATGAACTTCAACATCTCGGCGTCTCTCAACGCCTCGAGGCTGCTCTTCAGGCCTAGCCTATGCCTCCCTCACTAC ACCGTACCCACGTTCAACGACCTGCCCATCCCGCTCGACAGGGACATCCAGAAGGACGGCCGAAAGGCCGACATC AAGGCAGTCGTCCTCGACAAGGACGACTGCTTCGCCTATCCGGACACGAATGAGGTCCATGAGCCGTACAGACAA CACTTCGAGGCGCTCAAGAGAGCGTACCCTGGCCGGCGTCTGCTCGTGGTGTCCAACACCGCCGGCGCCACGGGC TGGGACAAGCAGCTGAAGCAGGCTGCGCAGCTGGAGAAGAGCACCGGCGTCTTCGTCTTGGCTCACTCTGCCAAG AAGCCCGGGTGCGGCTCCGAGGTCATGGCCTACTTCAAGCAGCACCCGGAGACGGGAGTCACTCACCCCTCTCAC GTCGCCGTCGTCGGCGACCGGCTGATGACAGACGTCATGCTGGCCAACATGATGGGCTCTTGGGGGTTCTGGATC AGAGACGGGGTCGTCCCCCTGCGGCAAAAGAGCATCTTCTCCCGATTGGAGCGCAACCTGGCCTCGTTCCTGGCA GCAAGCGGAGCACAAGCCCCGTGGCCTCAGACTCGGACCAGACAGTGA |
| Gene | >Hirsu2|2931 ATGAACTTCAACATCTCGGCGTCTCTCAACGCCTCGAGGCTGCTCTTCAGGCCTAGCCTATGCCTCCCTCACTAC ACCGTACCCACGTTCAACGACCTGCCCATCCCGCTCGACAGGGACATCCAGAAGGACGGCCGAAAGGCCGACATC AAGGCAGTCGTCCTCGACAAGGACGACTGCTTCGCCTATCCGGACACGAATGAGGTCCATGAGCCGTACAGAGTA AGAGGTGCTCCTCTGCTCAGCCCAATCGGGACTCGCTGACCGTGCGACAGCAACACTTCGAGGCGCTCAAGAGAG CGTACCCTGGCCGGCGTCTGCTCGTGGTGTCCAACACCGCCGGCGCCACGGGCTGGGACAAGCAGCTGAAGCAGG CTGCGCAGCTGGAGAAGAGCACCGGCGTCTTCGTCTTGGCTCACTCTGCCAAGAAGCCCGGGTGCGGCTCCGAGG TCATGGCCTACTTCAAGCAGCACCCGGAGACGGGAGTCACTCACCCCTCTCACGTCGCCGTCGTCGGCGACCGGC TGATGACAGACGTCATGCTGGCCAACATGATGGGCTCTTGGGGGTTCTGGATCAGAGACGGGGTCGTCCCCCTGC GGCAAAAGAGCATCGTGCGTTCTCGGCCCCCGCGTCAGTGACGATCGACTTCGCCTAACGTGATTGTAGTTCTCC CGATTGGAGCGCAACCTGGCCTCGTTCCTGGCAGCAAGCGGAGCACAAGCCCCGTGGCCTCAGACTCGGACCAGA CAGTGA |