Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2919
Gene name
LocationContig_1729:2076..4740
Strand-
Gene length (bp)2664
Transcript length (bp)2115
Coding sequence length (bp)2115
Protein length (aa) 705

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 7.1E-16 145 331

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O14130|YF54_SCHPO Uncharacterized transcriptional regulatory protein C3C7.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3C7.04 PE=3 SV=1 127 478 3.0E-11

GO

GO Term Description Terminal node
GO:0006351 transcription, DNA-templated Yes
GO:0003677 DNA binding Yes
GO:0008270 zinc ion binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901360 organic cyclic compound metabolic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0009987 cellular process No
GO:1901363 heterocyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0003676 nucleic acid binding No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0005488 binding No
GO:0044249 cellular biosynthetic process No
GO:0009058 biosynthetic process No
GO:0008150 biological_process No
GO:0046483 heterocycle metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0043170 macromolecule metabolic process No
GO:0044237 cellular metabolic process No
GO:0046914 transition metal ion binding No
GO:1901576 organic substance biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0003674 molecular_function No
GO:0019438 aromatic compound biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0008152 metabolic process No
GO:0046872 metal ion binding No
GO:0043167 ion binding No
GO:0044238 primary metabolic process No
GO:0043169 cation binding No
GO:0016070 RNA metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0090304 nucleic acid metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2919
MGESPQDNGYSRSACTECQRRKQKCNRVWPCNHCQKRKVADKCRFGHGQPGPEKMGSHDGSRKRQLSHEDLTDSS
DTNPWDIDSGFEAIGYTASHLFSGLNTSDPRVKATPKQYKQYYMNVTSCPQLERALQVLPPRPYTDSLVQNFLNN
VNYHYYIIYPPSFLDEYRAWWASRSDNRPLGMQWTCLLLMVCACSAQYTDIELQRKLEQDLGETTQKLTEHYHNA
ARELHSVIPVGNNHLLNVQTLLHSCYWYKSEARFVECWHVLSSAIREAQEMGINHEAVAGPISEFEREMRRRVWC
VLDTWDWQISALLSRPMIIDRTDCKVGLPSLQLEGYSPSPLLHMKLQSELIAQLARRFGLPRNVVSPNDVREYQN
TVETWMSTFPPTYDFDSPDESADVQRPWIVLHRHYLRTMAYSMLLDPIRAYLAKPMTAESSPVELRIRDDGIDYC
LRLMGFLYGFFDHVYPRDAKFHFVLFCIFDTAAVLCSALMHDGDGTIPRRDDILGAVDGALAMLKRLNNATKTAK
TSYEILLRVSQRVMRPASVAPTPSETGRRRKSAKTGGDLAMTPPCVSQAELGVAGDPGSVDSYMTYGSMPPKNGT
LISQTPMSHMSTSPEILGSNGSLIYSEPSSSGPLSVDRPAVGATPSVDHMGMTDYAQQTPYLNMTPPTDDMFQPL
EFGNITQQELGDLATLWNYESLNLDFINP*
Coding >Hirsu2|2919
ATGGGCGAGAGCCCCCAGGACAACGGCTATAGCCGTTCTGCCTGCACCGAGTGCCAGCGCCGCAAGCAAAAGTGT
AATCGCGTGTGGCCATGCAATCACTGCCAGAAGCGCAAGGTCGCCGACAAGTGCCGCTTCGGCCATGGCCAGCCC
GGCCCGGAGAAGATGGGCAGCCATGACGGGAGTCGCAAACGGCAGCTGAGCCACGAGGACCTGACCGACTCGAGC
GACACCAACCCCTGGGATATCGACAGCGGCTTCGAGGCCATCGGCTATACCGCATCGCACCTCTTCTCCGGCCTC
AACACGTCCGACCCCAGGGTCAAGGCAACGCCCAAGCAGTACAAACAGTACTACATGAACGTCACCTCCTGTCCC
CAGCTGGAGCGTGCTCTCCAGGTTCTGCCCCCTCGGCCCTACACCGACTCTCTGGTCCAGAACTTCCTGAACAAC
GTAAACTACCACTACTACATCATCTATCCCCCGTCTTTCCTCGACGAGTACCGCGCTTGGTGGGCCTCGAGGTCG
GACAATCGACCCCTGGGCATGCAATGGACCTGCCTGCTGCTCATGGTTTGCGCCTGCTCCGCCCAGTACACCGAC
ATCGAGCTGCAGCGCAAGCTGGAGCAAGACTTGGGCGAGACGACGCAGAAGCTCACCGAGCACTATCACAATGCA
GCGCGCGAGCTCCACAGCGTCATTCCCGTCGGCAACAACCACCTCTTGAATGTCCAGACTCTGCTACACTCGTGC
TACTGGTACAAGTCCGAGGCCCGCTTCGTCGAGTGCTGGCACGTCCTCAGCTCCGCCATCCGCGAAGCACAGGAG
ATGGGCATCAATCATGAGGCCGTCGCCGGACCCATATCCGAGTTTGAGCGCGAGATGCGCAGGAGGGTGTGGTGC
GTCCTGGACACCTGGGACTGGCAAATCTCCGCCCTGCTCTCCCGCCCCATGATCATCGATCGCACCGACTGCAAG
GTCGGCCTGCCGAGTCTCCAGTTGGAGGGCTACTCGCCCTCGCCGCTCCTGCACATGAAGTTGCAGTCGGAGCTC
ATCGCCCAGCTCGCCAGACGCTTTGGCCTCCCGAGAAACGTCGTGAGCCCCAACGACGTGCGAGAGTATCAGAAT
ACCGTCGAGACGTGGATGAGCACCTTTCCGCCCACGTACGACTTCGACAGCCCCGACGAGAGCGCCGACGTGCAG
CGGCCGTGGATCGTTCTGCACAGGCACTACCTACGCACCATGGCATACTCGATGCTCCTCGACCCGATCCGAGCC
TACCTGGCCAAGCCCATGACGGCAGAGTCGTCCCCGGTCGAGCTGCGGATCCGTGACGACGGCATCGACTACTGC
CTGAGGCTGATGGGCTTTCTCTACGGCTTCTTCGACCACGTCTATCCGCGAGACGCCAAGTTCCACTTCGTCCTG
TTCTGCATCTTCGACACCGCCGCCGTCCTGTGCTCAGCCCTGATGCATGACGGAGACGGCACCATACCTCGGCGC
GACGACATCCTCGGCGCCGTCGACGGCGCTCTGGCCATGCTGAAGCGGCTCAACAACGCGACCAAGACGGCCAAG
ACGTCGTACGAGATTCTCCTCCGCGTCTCCCAGCGGGTGATGAGGCCTGCCTCGGTCGCGCCCACCCCCTCCGAG
ACGGGCCGTCGCAGGAAGTCGGCCAAGACGGGTGGCGACTTGGCCATGACGCCGCCATGCGTCTCCCAAGCCGAG
CTGGGCGTCGCGGGCGACCCGGGAAGCGTCGATTCCTATATGACGTACGGCTCCATGCCACCCAAGAACGGCACT
CTGATCTCCCAGACGCCCATGTCACACATGTCGACCTCGCCCGAAATCCTGGGCTCCAACGGATCGCTCATCTAT
TCCGAACCGTCGTCAAGCGGCCCGCTGAGCGTGGACAGGCCCGCGGTAGGGGCGACGCCCTCGGTGGACCACATG
GGCATGACCGACTACGCGCAACAAACGCCCTACCTCAACATGACGCCGCCCACAGACGACATGTTCCAGCCACTC
GAGTTCGGCAACATCACCCAGCAGGAACTCGGCGACCTGGCGACGCTGTGGAACTATGAGAGCCTAAACTTGGAT
TTTATCAACCCGTAG
Transcript >Hirsu2|2919
ATGGGCGAGAGCCCCCAGGACAACGGCTATAGCCGTTCTGCCTGCACCGAGTGCCAGCGCCGCAAGCAAAAGTGT
AATCGCGTGTGGCCATGCAATCACTGCCAGAAGCGCAAGGTCGCCGACAAGTGCCGCTTCGGCCATGGCCAGCCC
GGCCCGGAGAAGATGGGCAGCCATGACGGGAGTCGCAAACGGCAGCTGAGCCACGAGGACCTGACCGACTCGAGC
GACACCAACCCCTGGGATATCGACAGCGGCTTCGAGGCCATCGGCTATACCGCATCGCACCTCTTCTCCGGCCTC
AACACGTCCGACCCCAGGGTCAAGGCAACGCCCAAGCAGTACAAACAGTACTACATGAACGTCACCTCCTGTCCC
CAGCTGGAGCGTGCTCTCCAGGTTCTGCCCCCTCGGCCCTACACCGACTCTCTGGTCCAGAACTTCCTGAACAAC
GTAAACTACCACTACTACATCATCTATCCCCCGTCTTTCCTCGACGAGTACCGCGCTTGGTGGGCCTCGAGGTCG
GACAATCGACCCCTGGGCATGCAATGGACCTGCCTGCTGCTCATGGTTTGCGCCTGCTCCGCCCAGTACACCGAC
ATCGAGCTGCAGCGCAAGCTGGAGCAAGACTTGGGCGAGACGACGCAGAAGCTCACCGAGCACTATCACAATGCA
GCGCGCGAGCTCCACAGCGTCATTCCCGTCGGCAACAACCACCTCTTGAATGTCCAGACTCTGCTACACTCGTGC
TACTGGTACAAGTCCGAGGCCCGCTTCGTCGAGTGCTGGCACGTCCTCAGCTCCGCCATCCGCGAAGCACAGGAG
ATGGGCATCAATCATGAGGCCGTCGCCGGACCCATATCCGAGTTTGAGCGCGAGATGCGCAGGAGGGTGTGGTGC
GTCCTGGACACCTGGGACTGGCAAATCTCCGCCCTGCTCTCCCGCCCCATGATCATCGATCGCACCGACTGCAAG
GTCGGCCTGCCGAGTCTCCAGTTGGAGGGCTACTCGCCCTCGCCGCTCCTGCACATGAAGTTGCAGTCGGAGCTC
ATCGCCCAGCTCGCCAGACGCTTTGGCCTCCCGAGAAACGTCGTGAGCCCCAACGACGTGCGAGAGTATCAGAAT
ACCGTCGAGACGTGGATGAGCACCTTTCCGCCCACGTACGACTTCGACAGCCCCGACGAGAGCGCCGACGTGCAG
CGGCCGTGGATCGTTCTGCACAGGCACTACCTACGCACCATGGCATACTCGATGCTCCTCGACCCGATCCGAGCC
TACCTGGCCAAGCCCATGACGGCAGAGTCGTCCCCGGTCGAGCTGCGGATCCGTGACGACGGCATCGACTACTGC
CTGAGGCTGATGGGCTTTCTCTACGGCTTCTTCGACCACGTCTATCCGCGAGACGCCAAGTTCCACTTCGTCCTG
TTCTGCATCTTCGACACCGCCGCCGTCCTGTGCTCAGCCCTGATGCATGACGGAGACGGCACCATACCTCGGCGC
GACGACATCCTCGGCGCCGTCGACGGCGCTCTGGCCATGCTGAAGCGGCTCAACAACGCGACCAAGACGGCCAAG
ACGTCGTACGAGATTCTCCTCCGCGTCTCCCAGCGGGTGATGAGGCCTGCCTCGGTCGCGCCCACCCCCTCCGAG
ACGGGCCGTCGCAGGAAGTCGGCCAAGACGGGTGGCGACTTGGCCATGACGCCGCCATGCGTCTCCCAAGCCGAG
CTGGGCGTCGCGGGCGACCCGGGAAGCGTCGATTCCTATATGACGTACGGCTCCATGCCACCCAAGAACGGCACT
CTGATCTCCCAGACGCCCATGTCACACATGTCGACCTCGCCCGAAATCCTGGGCTCCAACGGATCGCTCATCTAT
TCCGAACCGTCGTCAAGCGGCCCGCTGAGCGTGGACAGGCCCGCGGTAGGGGCGACGCCCTCGGTGGACCACATG
GGCATGACCGACTACGCGCAACAAACGCCCTACCTCAACATGACGCCGCCCACAGACGACATGTTCCAGCCACTC
GAGTTCGGCAACATCACCCAGCAGGAACTCGGCGACCTGGCGACGCTGTGGAACTATGAGAGCCTAAACTTGGAT
TTTATCAACCCGTAG
Gene >Hirsu2|2919
ATGGGCGAGAGCCCCCAGGACAACGGCTATAGCCGTTCTGCCTGCACCGAGTGCCAGCGCCGCAAGCAAAAGGTA
ATGGACCTGTCATCCCGCCATTCTTCCTCACCCCGCGACACGCCGGCCTGGAGCTCCAACCTCGCTGCTGTTCTT
CCCGCCTCTTGTCCTCGACTCGCCCTTGAATCGGCCGTCCGTGTCCTGTGCGCCCGTCCGTCTTCTTCTCCGCTC
CCGTCCATATCACTTCTCGCGCAGCCTTCCCACCCCACTCCTGCTCCCCTTGTCCCGGTCGCCTTCACACGCGCC
GGATATCCAGACTCACGCCGGGCCGCCTCGTCTCCTGCGGAATCTGACGTCTCTTGTAGTGTAATCGCGTGTGGC
CATGCAATCACTGCCAGAAGCGCAAGGTCGCCGACAAGTGCCGCTTCGGCCATGGCCAGCCCGGCCCGGAGAAGA
TGGGCAGCCATGACGGGAGTCGCAAACGGCAGCTGAGCCACGAGGACCTGACCGACTCGAGCGACACCAACCCCT
GGGATATCGACAGCGGCTTCGAGGCCATCGGCTATACCGCATCGCACCTCTTCTCCGGCCTCAACACGTCCGACG
TAAGGCTCTACCCTCTTCTCCCCACCTTCTGCCCTCGCCTCCCCTGACCATGAACCCTCTGCAGCCCAGGGTCAA
GGCAACGCCCAAGCAGTACAAACAGTACTACATGAACGTCACCTCCTGTCCCCAGCTGGAGCGTGCTCTCCAGGT
TCTGCCCCCTCGGCCCTACACCGGTGAGCCGGCCTTGTACCCGTCGCCCCCGCCCCCGCCGTGCTGACGAGCAGA
CAGACTCTCTGGTCCAGAACTTCCTGAACAACGTAAACTACCACTACTACATCATCTATCCCCCGTCTTTCCTCG
ACGAGTACCGCGCTTGGTGGGCCTCGAGGTCGGACAATCGACCCCTGGGCATGCAATGGACCTGCCTGCTGCTCA
TGGTTTGCGCCTGCTCCGCCCAGTACACCGACATCGAGCTGCAGCGCAAGCTGGAGCAAGACTTGGGCGAGACGA
CGCAGAAGCTCACCGAGCACTATCACAATGCAGCGCGCGAGCTCCACAGCGTCATTCCCGTCGGCAACAACCACC
TCTTGAATGTCCAGACTCTGCTACACTCGTGCTACTGGTACAAGTCCGAGGCCCGCTTCGTCGAGTGCTGGCACG
TCCTCAGCTCCGCCATCCGCGAAGCACAGGAGATGGGTACGCCGGTCCAACCGAGGCATCCGATGCCGCCTTTTG
TCGCGGCTGGCCCGGGGGCGTTCGCGAGGCTGACTTTTCTCGGTCAGGCATCAATCATGAGGCCGTCGCCGGACC
CATATCCGAGTTTGAGCGCGAGATGCGCAGGAGGGTGTGGTGCGTCCTGGACACCTGGGACTGGTACGTCGTTCC
CGAGCCGCGAGCCCGCCGCCACGGCAGCCTCTGACATTGCCAAGGCAAATCTCCGCCCTGCTCTCCCGCCCCATG
ATCATCGATCGCACCGACTGCAAGGTCGGCCTGCCGAGTCTCCAGTTGGAGGGCTACTCGCCCTCGCCGCTCCTG
CACATGAAGTTGCAGTCGGAGCTCATCGCCCAGCTCGCCAGACGCTTTGGCCTCCCGAGAAACGTCGTGAGCCCC
AACGACGTGCGAGAGTATCAGAATACCGTCGAGACGTGGATGAGCACCTTTCCGCCCACGTACGACTTCGACAGC
CCCGACGAGAGCGCCGACGTGCAGCGGCCGTGGATCGTTCTGCACAGGCACTACCTACGCACCATGGCATACTCG
ATGCTCCTCGACCCGATCCGAGCCTACCTGGCCAAGCCCATGACGGCAGAGTCGTCCCCGGTCGAGCTGCGGATC
CGTGACGACGGCATCGACTACTGCCTGAGGCTGATGGGCTTTCTCTACGGCTTCTTCGACCACGTCTATCCGCGA
GACGCCAAGTTCCACTTCGTCCTGTTCTGCATCTTCGACACCGCCGCCGTCCTGTGCTCAGCCCTGATGCATGAC
GGAGACGGCACCATACCTCGGCGCGACGACATCCTCGGCGCCGTCGACGGCGCTCTGGCCATGCTGAAGCGGCTC
AACAACGCGACCAAGACGGCCAAGACGTCGTACGAGATTCTCCTCCGCGTCTCCCAGCGGGTGATGAGGCCTGCC
TCGGTCGCGCCCACCCCCTCCGAGACGGGCCGTCGCAGGAAGTCGGCCAAGACGGGTGGCGACTTGGCCATGACG
CCGCCATGCGTCTCCCAAGCCGAGCTGGGCGTCGCGGGCGACCCGGGAAGCGTCGATTCCTATATGACGTACGGC
TCCATGCCACCCAAGAACGGCACTCTGATCTCCCAGACGCCCATGTCACACATGTCGACCTCGCCCGAAATCCTG
GGCTCCAACGGATCGCTCATCTATTCCGAACCGTCGTCAAGCGGCCCGCTGAGCGTGGACAGGCCCGCGGTAGGG
GCGACGCCCTCGGTGGACCACATGGGCATGACCGACTACGCGCAACAAACGCCCTACCTCAACATGACGCCGCCC
ACAGACGACATGTTCCAGCCACTCGAGTTCGGCAACATCACCCAGCAGGAACTCGGCGACCTGGCGACGCTGTGG
AACTATGAGAGCCTAAACTTGGATTTTATCAACCCGTAG

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