Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2918
Gene name
LocationContig_1729:113..1424
Strand+
Gene length (bp)1311
Transcript length (bp)1311
Coding sequence length (bp)1311
Protein length (aa) 437

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 3.3E-28 2 368

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 1 434 1.0E-138
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 2 436 2.0E-134
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 2 436 2.0E-122
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 2 434 1.0E-69
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 9 427 3.0E-43
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Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 1 434 1.0E-138
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 2 436 2.0E-134
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 2 436 2.0E-122
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 2 434 1.0E-69
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 9 427 3.0E-43
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 1 291 1.0E-29
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 1 267 7.0E-29
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 8 270 7.0E-25
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 2 422 5.0E-23
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 2 436 2.0E-22
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 2 269 3.0E-22
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 4 259 1.0E-21
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 4 341 1.0E-21
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 2 289 1.0E-20
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 3 256 6.0E-19
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 8 296 6.0E-18
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 2 434 7.0E-18
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 3 418 2.0E-15
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 8 173 2.0E-14
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 1 240 6.0E-14
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 9 212 9.0E-14
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 2 207 2.0E-13
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 5 416 3.0E-12
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 2 318 7.0E-10
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 71 193 1.0E-09
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 1 380 8.0E-09
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 1 380 8.0E-09
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 3 429 1.0E-07
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 27 294 1.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051179 localization No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 31 53 22
2 65 84 19
3 89 111 22
4 124 146 22
5 156 178 22
6 240 262 22
7 266 285 19
8 292 314 22
9 319 341 22
10 354 373 19
11 383 402 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2918
MLVYLTCFLDRTNIGNARVAGMPEDVGASPAQFSLAVSVFYATYVALELPWTVLAAGRRPAPRRLLAGLCVVWSL
TTALSGLVRSVPALYAARLALGACEAGLFPALNLYLTAVYKRGEQAARVSYLFVCTAVAGAFGGLLAWAILRGMD
GLAGLAGWRWLFLVEGLVSLLVAPVLWFGLPDDPAAAYFLSPPERALMRARARQRARYMGSDVFSWAEVRAALRD
PKLYLSAAIQFCQDILLYGFSTFLPSIIVAMGYSAIQAQYLSIPVYLFGGLCFLALAFLSDRLCLRGPFVFLANI
PGILGYVLILCPTANAVKFFATFLCAVAVYNGPGLNLTWLNVNVAPHYRRATAIGLQLSIGNSAGIVAGQIYTTA
PYLLGNSLSLAALALSQLLILLNWLYLRRCNQQKSDIASGRQKDTRKVRTGDRELDFKYHL*
Coding >Hirsu2|2918
ATGCTCGTCTACCTGACCTGCTTCCTGGACCGGACCAACATCGGCAACGCGCGGGTGGCGGGCATGCCCGAGGAC
GTGGGCGCCAGCCCGGCGCAGTTCTCGCTGGCCGTGTCCGTCTTCTACGCCACCTACGTGGCGCTGGAGCTGCCG
TGGACGGTGCTGGCGGCCGGGCGGCGGCCGGCGCCGCGCCGGCTGCTGGCCGGCCTGTGCGTCGTCTGGTCGCTG
ACGACGGCGCTGTCGGGCCTGGTGCGGTCGGTGCCGGCGCTGTACGCGGCCCGGCTGGCGCTCGGCGCCTGCGAG
GCCGGCCTCTTCCCGGCCCTGAACCTGTACCTGACGGCCGTCTACAAGCGCGGCGAGCAGGCCGCCCGCGTCTCG
TACCTGTTCGTCTGCACCGCCGTCGCCGGCGCCTTCGGCGGCCTGCTGGCCTGGGCCATCCTGCGCGGCATGGAC
GGCCTGGCCGGCCTGGCCGGCTGGCGCTGGCTCTTCCTCGTCGAGGGCCTCGTCAGCCTGCTCGTCGCCCCCGTC
CTGTGGTTCGGCCTGCCCGACGACCCGGCCGCCGCCTACTTCCTGTCGCCGCCCGAGCGCGCCCTGATGCGCGCC
CGCGCCCGCCAGCGCGCCCGCTACATGGGCAGCGACGTCTTCAGCTGGGCCGAGGTCCGCGCCGCCCTGCGCGAC
CCCAAGCTCTACCTGAGCGCCGCCATCCAGTTCTGCCAGGACATCCTGCTCTACGGCTTCAGCACCTTTCTGCCC
TCCATCATCGTCGCCATGGGCTACTCCGCCATCCAGGCCCAGTACCTCAGCATCCCCGTCTACCTCTTCGGCGGC
CTCTGCTTCCTCGCCCTCGCCTTCCTGTCCGACCGCCTCTGCCTGCGCGGGCCCTTCGTCTTCCTCGCCAACATC
CCCGGCATCCTCGGCTACGTCCTCATCCTGTGCCCGACCGCCAACGCCGTCAAGTTCTTCGCCACCTTCCTGTGC
GCCGTCGCCGTCTACAACGGCCCGGGCCTCAACCTGACCTGGCTCAACGTCAACGTCGCGCCTCACTATCGCCGC
GCCACCGCCATCGGCCTCCAGCTGAGCATCGGCAACTCGGCCGGCATCGTCGCCGGCCAGATCTACACCACCGCC
CCCTACCTGCTCGGCAACAGCCTCTCCCTCGCCGCCCTCGCCCTGTCGCAGCTCCTCATCCTCCTCAACTGGCTC
TACCTGCGCCGCTGCAACCAGCAAAAGTCCGACATTGCCAGCGGCCGCCAAAAGGACACGCGCAAGGTCCGCACC
GGGGACCGGGAACTCGATTTCAAGTACCATCTGTAG
Transcript >Hirsu2|2918
ATGCTCGTCTACCTGACCTGCTTCCTGGACCGGACCAACATCGGCAACGCGCGGGTGGCGGGCATGCCCGAGGAC
GTGGGCGCCAGCCCGGCGCAGTTCTCGCTGGCCGTGTCCGTCTTCTACGCCACCTACGTGGCGCTGGAGCTGCCG
TGGACGGTGCTGGCGGCCGGGCGGCGGCCGGCGCCGCGCCGGCTGCTGGCCGGCCTGTGCGTCGTCTGGTCGCTG
ACGACGGCGCTGTCGGGCCTGGTGCGGTCGGTGCCGGCGCTGTACGCGGCCCGGCTGGCGCTCGGCGCCTGCGAG
GCCGGCCTCTTCCCGGCCCTGAACCTGTACCTGACGGCCGTCTACAAGCGCGGCGAGCAGGCCGCCCGCGTCTCG
TACCTGTTCGTCTGCACCGCCGTCGCCGGCGCCTTCGGCGGCCTGCTGGCCTGGGCCATCCTGCGCGGCATGGAC
GGCCTGGCCGGCCTGGCCGGCTGGCGCTGGCTCTTCCTCGTCGAGGGCCTCGTCAGCCTGCTCGTCGCCCCCGTC
CTGTGGTTCGGCCTGCCCGACGACCCGGCCGCCGCCTACTTCCTGTCGCCGCCCGAGCGCGCCCTGATGCGCGCC
CGCGCCCGCCAGCGCGCCCGCTACATGGGCAGCGACGTCTTCAGCTGGGCCGAGGTCCGCGCCGCCCTGCGCGAC
CCCAAGCTCTACCTGAGCGCCGCCATCCAGTTCTGCCAGGACATCCTGCTCTACGGCTTCAGCACCTTTCTGCCC
TCCATCATCGTCGCCATGGGCTACTCCGCCATCCAGGCCCAGTACCTCAGCATCCCCGTCTACCTCTTCGGCGGC
CTCTGCTTCCTCGCCCTCGCCTTCCTGTCCGACCGCCTCTGCCTGCGCGGGCCCTTCGTCTTCCTCGCCAACATC
CCCGGCATCCTCGGCTACGTCCTCATCCTGTGCCCGACCGCCAACGCCGTCAAGTTCTTCGCCACCTTCCTGTGC
GCCGTCGCCGTCTACAACGGCCCGGGCCTCAACCTGACCTGGCTCAACGTCAACGTCGCGCCTCACTATCGCCGC
GCCACCGCCATCGGCCTCCAGCTGAGCATCGGCAACTCGGCCGGCATCGTCGCCGGCCAGATCTACACCACCGCC
CCCTACCTGCTCGGCAACAGCCTCTCCCTCGCCGCCCTCGCCCTGTCGCAGCTCCTCATCCTCCTCAACTGGCTC
TACCTGCGCCGCTGCAACCAGCAAAAGTCCGACATTGCCAGCGGCCGCCAAAAGGACACGCGCAAGGTCCGCACC
GGGGACCGGGAACTCGATTTCAAGTACCATCTGTAG
Gene >Hirsu2|2918
ATGCTCGTCTACCTGACCTGCTTCCTGGACCGGACCAACATCGGCAACGCGCGGGTGGCGGGCATGCCCGAGGAC
GTGGGCGCCAGCCCGGCGCAGTTCTCGCTGGCCGTGTCCGTCTTCTACGCCACCTACGTGGCGCTGGAGCTGCCG
TGGACGGTGCTGGCGGCCGGGCGGCGGCCGGCGCCGCGCCGGCTGCTGGCCGGCCTGTGCGTCGTCTGGTCGCTG
ACGACGGCGCTGTCGGGCCTGGTGCGGTCGGTGCCGGCGCTGTACGCGGCCCGGCTGGCGCTCGGCGCCTGCGAG
GCCGGCCTCTTCCCGGCCCTGAACCTGTACCTGACGGCCGTCTACAAGCGCGGCGAGCAGGCCGCCCGCGTCTCG
TACCTGTTCGTCTGCACCGCCGTCGCCGGCGCCTTCGGCGGCCTGCTGGCCTGGGCCATCCTGCGCGGCATGGAC
GGCCTGGCCGGCCTGGCCGGCTGGCGCTGGCTCTTCCTCGTCGAGGGCCTCGTCAGCCTGCTCGTCGCCCCCGTC
CTGTGGTTCGGCCTGCCCGACGACCCGGCCGCCGCCTACTTCCTGTCGCCGCCCGAGCGCGCCCTGATGCGCGCC
CGCGCCCGCCAGCGCGCCCGCTACATGGGCAGCGACGTCTTCAGCTGGGCCGAGGTCCGCGCCGCCCTGCGCGAC
CCCAAGCTCTACCTGAGCGCCGCCATCCAGTTCTGCCAGGACATCCTGCTCTACGGCTTCAGCACCTTTCTGCCC
TCCATCATCGTCGCCATGGGCTACTCCGCCATCCAGGCCCAGTACCTCAGCATCCCCGTCTACCTCTTCGGCGGC
CTCTGCTTCCTCGCCCTCGCCTTCCTGTCCGACCGCCTCTGCCTGCGCGGGCCCTTCGTCTTCCTCGCCAACATC
CCCGGCATCCTCGGCTACGTCCTCATCCTGTGCCCGACCGCCAACGCCGTCAAGTTCTTCGCCACCTTCCTGTGC
GCCGTCGCCGTCTACAACGGCCCGGGCCTCAACCTGACCTGGCTCAACGTCAACGTCGCGCCTCACTATCGCCGC
GCCACCGCCATCGGCCTCCAGCTGAGCATCGGCAACTCGGCCGGCATCGTCGCCGGCCAGATCTACACCACCGCC
CCCTACCTGCTCGGCAACAGCCTCTCCCTCGCCGCCCTCGCCCTGTCGCAGCTCCTCATCCTCCTCAACTGGCTC
TACCTGCGCCGCTGCAACCAGCAAAAGTCCGACATTGCCAGCGGCCGCCAAAAGGACACGCGCAAGGTCCGCACC
GGGGACCGGGAACTCGATTTCAAGTACCATCTGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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