Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2910
Gene name
LocationContig_1723:3688..4753
Strand+
Gene length (bp)1065
Transcript length (bp)1065
Coding sequence length (bp)1065
Protein length (aa) 355

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04488 Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif 2.5E-05 145 178

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2910
MMMAARLSFRLLVCAVFVTCGLFMLRLWSQKTIQLSGPNSLVRTLSLDKAARSSIPNQVHYVFLLAEPNADFPFL
FYHYLSVYSALFFMRPDKIILTTNANDEQITRARNGSAGKWAKLIFDTPGLTLNHVEMITRTPRGVEIGAIEHRS
DFARVGAVQKFGGLYIDFDAFVLRDIKALRESGFNTIGGREPGGRVNSGIFMASKNSKALRTWAEMMPERFDQGW
MTHSNDLLTTIAEQLVPEGEALIMEQQAFAPGAWEDNDIKRLFEPHDDVPSNLERLAKGEPLPAPEDDRPEWAWN
WNKTYILHAYRIEDTDRNWITPRSLLDRRSDFARAVYPAVKSLYDNAAIAAEEA*
Coding >Hirsu2|2910
ATGATGATGGCCGCTCGGCTTTCGTTCCGGTTGTTGGTCTGCGCCGTCTTCGTTACCTGCGGCCTCTTCATGCTT
CGACTCTGGTCTCAAAAGACGATCCAGCTCAGCGGCCCCAACTCGCTCGTCCGGACCTTGAGCCTCGACAAGGCT
GCCAGGTCGAGCATCCCCAACCAGGTGCACTATGTCTTCCTCCTGGCAGAACCCAATGCAGACTTCCCCTTTCTC
TTCTACCATTACCTCTCCGTCTACTCCGCCCTCTTCTTCATGCGGCCCGACAAGATCATCCTCACCACCAACGCC
AACGACGAGCAGATAACGCGCGCGAGGAACGGCTCGGCCGGTAAATGGGCCAAGCTCATTTTCGACACGCCCGGG
CTGACGTTGAACCACGTCGAGATGATCACGAGGACGCCGCGCGGCGTCGAGATCGGCGCCATCGAGCATCGGTCG
GACTTTGCTCGGGTCGGGGCCGTCCAAAAGTTCGGCGGCCTTTACATCGACTTCGACGCCTTCGTCCTGCGCGAC
ATCAAGGCCCTTCGCGAGTCCGGCTTCAACACCATCGGCGGGCGAGAACCCGGCGGCCGAGTGAATAGCGGCATC
TTCATGGCCAGCAAGAACAGCAAGGCGCTCCGGACCTGGGCCGAGATGATGCCCGAGCGGTTCGACCAAGGATGG
ATGACGCATTCCAACGACCTGCTCACCACCATCGCCGAGCAGCTGGTGCCGGAGGGCGAGGCGCTCATCATGGAG
CAGCAGGCCTTCGCGCCCGGCGCCTGGGAAGACAACGACATCAAACGCCTCTTCGAGCCGCACGACGATGTCCCG
TCCAACCTCGAGCGCCTGGCCAAGGGCGAGCCGCTGCCCGCTCCCGAGGACGACCGGCCGGAGTGGGCCTGGAAC
TGGAACAAGACCTACATCCTTCACGCGTACCGGATCGAGGACACCGATCGGAATTGGATCACGCCACGCAGCCTG
CTCGACAGACGGAGCGATTTCGCGCGCGCCGTCTACCCAGCCGTCAAGTCGCTGTACGATAACGCCGCGATCGCG
GCAGAAGAAGCGTGA
Transcript >Hirsu2|2910
ATGATGATGGCCGCTCGGCTTTCGTTCCGGTTGTTGGTCTGCGCCGTCTTCGTTACCTGCGGCCTCTTCATGCTT
CGACTCTGGTCTCAAAAGACGATCCAGCTCAGCGGCCCCAACTCGCTCGTCCGGACCTTGAGCCTCGACAAGGCT
GCCAGGTCGAGCATCCCCAACCAGGTGCACTATGTCTTCCTCCTGGCAGAACCCAATGCAGACTTCCCCTTTCTC
TTCTACCATTACCTCTCCGTCTACTCCGCCCTCTTCTTCATGCGGCCCGACAAGATCATCCTCACCACCAACGCC
AACGACGAGCAGATAACGCGCGCGAGGAACGGCTCGGCCGGTAAATGGGCCAAGCTCATTTTCGACACGCCCGGG
CTGACGTTGAACCACGTCGAGATGATCACGAGGACGCCGCGCGGCGTCGAGATCGGCGCCATCGAGCATCGGTCG
GACTTTGCTCGGGTCGGGGCCGTCCAAAAGTTCGGCGGCCTTTACATCGACTTCGACGCCTTCGTCCTGCGCGAC
ATCAAGGCCCTTCGCGAGTCCGGCTTCAACACCATCGGCGGGCGAGAACCCGGCGGCCGAGTGAATAGCGGCATC
TTCATGGCCAGCAAGAACAGCAAGGCGCTCCGGACCTGGGCCGAGATGATGCCCGAGCGGTTCGACCAAGGATGG
ATGACGCATTCCAACGACCTGCTCACCACCATCGCCGAGCAGCTGGTGCCGGAGGGCGAGGCGCTCATCATGGAG
CAGCAGGCCTTCGCGCCCGGCGCCTGGGAAGACAACGACATCAAACGCCTCTTCGAGCCGCACGACGATGTCCCG
TCCAACCTCGAGCGCCTGGCCAAGGGCGAGCCGCTGCCCGCTCCCGAGGACGACCGGCCGGAGTGGGCCTGGAAC
TGGAACAAGACCTACATCCTTCACGCGTACCGGATCGAGGACACCGATCGGAATTGGATCACGCCACGCAGCCTG
CTCGACAGACGGAGCGATTTCGCGCGCGCCGTCTACCCAGCCGTCAAGTCGCTGTACGATAACGCCGCGATCGCG
GCAGAAGAAGCGTGA
Gene >Hirsu2|2910
ATGATGATGGCCGCTCGGCTTTCGTTCCGGTTGTTGGTCTGCGCCGTCTTCGTTACCTGCGGCCTCTTCATGCTT
CGACTCTGGTCTCAAAAGACGATCCAGCTCAGCGGCCCCAACTCGCTCGTCCGGACCTTGAGCCTCGACAAGGCT
GCCAGGTCGAGCATCCCCAACCAGGTGCACTATGTCTTCCTCCTGGCAGAACCCAATGCAGACTTCCCCTTTCTC
TTCTACCATTACCTCTCCGTCTACTCCGCCCTCTTCTTCATGCGGCCCGACAAGATCATCCTCACCACCAACGCC
AACGACGAGCAGATAACGCGCGCGAGGAACGGCTCGGCCGGTAAATGGGCCAAGCTCATTTTCGACACGCCCGGG
CTGACGTTGAACCACGTCGAGATGATCACGAGGACGCCGCGCGGCGTCGAGATCGGCGCCATCGAGCATCGGTCG
GACTTTGCTCGGGTCGGGGCCGTCCAAAAGTTCGGCGGCCTTTACATCGACTTCGACGCCTTCGTCCTGCGCGAC
ATCAAGGCCCTTCGCGAGTCCGGCTTCAACACCATCGGCGGGCGAGAACCCGGCGGCCGAGTGAATAGCGGCATC
TTCATGGCCAGCAAGAACAGCAAGGCGCTCCGGACCTGGGCCGAGATGATGCCCGAGCGGTTCGACCAAGGATGG
ATGACGCATTCCAACGACCTGCTCACCACCATCGCCGAGCAGCTGGTGCCGGAGGGCGAGGCGCTCATCATGGAG
CAGCAGGCCTTCGCGCCCGGCGCCTGGGAAGACAACGACATCAAACGCCTCTTCGAGCCGCACGACGATGTCCCG
TCCAACCTCGAGCGCCTGGCCAAGGGCGAGCCGCTGCCCGCTCCCGAGGACGACCGGCCGGAGTGGGCCTGGAAC
TGGAACAAGACCTACATCCTTCACGCGTACCGGATCGAGGACACCGATCGGAATTGGATCACGCCACGCAGCCTG
CTCGACAGACGGAGCGATTTCGCGCGCGCCGTCTACCCAGCCGTCAAGTCGCTGTACGATAACGCCGCGATCGCG
GCAGAAGAAGCGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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