© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|291 |
| Gene name | |
| Location | Contig_1055:42..1580 |
| Strand | - |
| Gene length (bp) | 1538 |
| Transcript length (bp) | 444 |
| Coding sequence length (bp) | 444 |
| Protein length (aa) | 148 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.5485 | 0.5388 | 0.3482 | 0.1142 | 0.1972 | 0.1735 | 0.1854 | 0.1843 | 0.1466 | 0.0498 |
| Orthofinder run ID | 4 |
| Orthogroup | 9205 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|291 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|291 MPVLPRQPPSGRRHGAVVPASQPDESYLAAAAAGGRLEPRQAERQMGDACWLGWRELVPETVRAERGRNLYPRLC YASVLVASFDAAARDREDDAAAASRRRRGPRRVVAVTLGDANAVPPPIESGGDAMVTYGSSPGAPDSGRKAG* |
| Coding | >Hirsu2|291 ATGCCTGTCCTCCCTCGGCAGCCCCCCTCCGGCCGACGCCATGGTGCCGTCGTTCCGGCCAGCCAGCCAGACGAG AGCTATTTGGCGGCGGCAGCAGCGGGAGGTCGACTCGAGCCCAGACAGGCGGAGCGGCAGATGGGCGATGCTTGC TGGCTTGGCTGGCGAGAGCTCGTCCCGGAGACAGTGCGCGCCGAGCGCGGCCGCAACCTATATCCCCGTCTCTGC TATGCGTCGGTCCTCGTCGCGAGCTTCGACGCTGCGGCGCGAGACCGGGAGGATGATGCAGCAGCAGCATCGCGA CGACGCAGAGGACCGCGGCGTGTCGTCGCCGTCACGCTCGGCGACGCCAACGCCGTGCCACCACCCATCGAGTCC GGAGGTGACGCCATGGTAACCTATGGCAGCAGCCCCGGGGCGCCAGACAGCGGCCGGAAGGCCGGCTAG |
| Transcript | >Hirsu2|291 ATGCCTGTCCTCCCTCGGCAGCCCCCCTCCGGCCGACGCCATGGTGCCGTCGTTCCGGCCAGCCAGCCAGACGAG AGCTATTTGGCGGCGGCAGCAGCGGGAGGTCGACTCGAGCCCAGACAGGCGGAGCGGCAGATGGGCGATGCTTGC TGGCTTGGCTGGCGAGAGCTCGTCCCGGAGACAGTGCGCGCCGAGCGCGGCCGCAACCTATATCCCCGTCTCTGC TATGCGTCGGTCCTCGTCGCGAGCTTCGACGCTGCGGCGCGAGACCGGGAGGATGATGCAGCAGCAGCATCGCGA CGACGCAGAGGACCGCGGCGTGTCGTCGCCGTCACGCTCGGCGACGCCAACGCCGTGCCACCACCCATCGAGTCC GGAGGTGACGCCATGGTAACCTATGGCAGCAGCCCCGGGGCGCCAGACAGCGGCCGGAAGGCCGGCTAG |
| Gene | >Hirsu2|291 ATGCCTGTCCTCCCTCGGCAGCCCCCCTCCGGCCGACGCCATGGTGCCGTCGTTCCGGCCAGCCAGCCAGACGAG AGCTATTTGGCGGCGGCAGCAGCGGGAGGTCGACTCGAGCCCAGACAGGCGGAGCGGCAGATGGGCGATGCTTGC TGGCTTGGCTGGCGAGAGCTCGTCCCGGAGACAGTGCGCGCCGAGCGCGGCCGGTGCTGGAGTCGAGCGTCCCCC CCCCCCCTCTTTGCGTCTCGTAACCGACCCCCTTTCTCCTCTCTCCTCTTCTCTCCTCACCTCGCCTCTCCTGTG CCGGACCCCCGCCTGACTCCGCGTCCTCATCATTGATTTATTTTTCTGGCCCCCTCCCCCCCGAGAGGGAGAAGC GGAGACGGGGAGGCGAGAGGGCGATTCGTTCGTCTTGTTTGTTTGTTTTCTCCCCCCTTTGCTTGCGGCGCCAAG GTCTTGCACGTGCACCGCGATGCTGCTCCGCCGTACAGTGCCTGCTGTCGGGCGGCGGCTGGCGAAGAACGAGGT CCGGCCTACTGCGCTGGATGCGCATGGGCAGGCAATAGCGTCGCCGCGGGCCACAAGGACGGTCGAAGCTGTCGT GGCCCGTCGCGGCAGAAGCCGTCACTTGCATCGGCGCAGTGTCTCAGTCCGAGGTGCCATCTGGCTGGCGGCCGT CTGCGTGCACTGTGGCCGGCGCGCGATGCCTGTTTGGCCCTACCGCCCGCCTCGCTCGCCTGCCTGTCCACATGA GCCATATTTTCGTCTTTGCCCGCTGGCTTTTCTGAGCCGGCCATGAAAGTAGCTAAGGATACCGCAGGTATGCAC ACGGGCACGAGTCGACGAAGCCCCCGAGAACCTCAACCGGCGCCCGTTCGCCCTTGGATCCGTGTCAACTTGCGG CCATGTCGTCTCGGCTGCTGTCCTTTTTTTTTTTTTTTTTTTCCCCCTCTGTCGCGATGCCGGTAACGGCGTGCG GCGGGCCGGAACAGGTAGGCAGGCATGTCGGTCTCTTCTCGATATAGCCAGCGTCGCACATGGGCGAAATCATGC TTGATTTCTCCGTGCATGCATGCGCGCGCATGCATTCTTGCATACGCACTTCATGCGTGCAGACGATGGATGGAC CTGGGCGGTACGGACACACGTAGTAGCATGTACAGTACCTAGGCAGGTTACATACAGTCGTGTCTAGTACTGTGT ATGCCTCGGTCGTAGTCTGCACTAGTATAGTAGCCCATACTAAGCTGCTCCTGTATCGTGGATGGGTATGTGCTT GGAGGCAGCCCACACTGTACAGCAACCTATATCCCCGTCTCTGCTATGCGTCGGTCCTCGTCGCGAGCTTCGACG CTGCGGCGCGAGACCGGGAGGATGATGCAGCAGCAGCATCGCGACGACGCAGAGGACCGCGGCGTGTCGTCGCCG TCACGCTCGGCGACGCCAACGCCGTGCCACCACCCATCGAGTCCGGAGGTGACGCCATGGTAACCTATGGCAGCA GCCCCGGGGCGCCAGACAGCGGCCGGAAGGCCGGCTAG |