Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2890
Gene name
LocationContig_1714:3568..5038
Strand-
Gene length (bp)1470
Transcript length (bp)1470
Coding sequence length (bp)1470
Protein length (aa) 490

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10998 DUF2838 Protein of unknown function (DUF2838) 1.8E-44 171 281

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O94673|YG75_SCHPO Uncharacterized membrane protein C776.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC776.05 PE=4 SV=2 79 461 7.0E-106
sp|P48236|YG3L_YEAST Uncharacterized membrane protein YGR149W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR149W PE=1 SV=1 127 472 4.0E-69

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

Domain # Start End Length
1 173 192 19
2 219 241 22
3 248 267 19
4 328 350 22
5 411 433 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2890
MDDDDQNDAKMALIGDQSEPEPALDSRATRAATTPSDSASVEPPCLPATSKLHRRLSRNPSLSDSSSHHEDWDPL
PPPDKLTVLDLLDNFALPQQLEKLQRGISAQTDKVRRSKDALKSKTQSARDRMVEEWRRRAPSADEQLDRYRQRM
RRRVDKLGKQWNDTKAISIREKISFICAVINIFISGYLIGGFPQHFHVWYTLQLVYFMPIRFLTYRSQGYHYFLA
DLCYFVNVLLSLSIWVFPESKRLFTAAYCLAFGNNAIAIVMWRNSLVFHSLDKVTSLFIHIMPCATLHCIVHLLT
PEEQRERFPAISIIKNSSPGSPAAYANVTSMLTWSTMPYALWQLGYYLLITVRRRDKIAAGRPTSFTWMRRSYSN
TWLGKLVLSLPDRLQEPAFMTIQYSYAVLTMLPCPIWFANQIASTAFLSVLFAWSIYNGSTYYIDVFGKRFQKEL
EVMKSEVLKWPNMQDPTFQPSSTTPPNEGIAFGASPSKH*
Coding >Hirsu2|2890
ATGGACGACGACGATCAAAATGACGCAAAAATGGCCCTTATCGGCGACCAGTCAGAACCAGAACCTGCACTCGAT
TCGCGGGCTACGCGCGCGGCCACAACTCCCTCTGACAGTGCCTCAGTCGAGCCGCCCTGTCTCCCAGCAACAAGT
AAACTGCACCGGAGGCTGTCACGAAACCCGTCCTTATCGGACAGCAGCTCTCATCATGAAGACTGGGATCCACTG
CCTCCACCTGACAAGTTGACCGTCCTTGACCTTCTTGACAACTTTGCACTGCCCCAGCAGCTTGAAAAACTCCAA
AGGGGCATATCGGCTCAAACTGACAAGGTTCGCCGGTCCAAGGACGCCTTGAAATCCAAGACGCAGTCCGCCCGG
GATCGCATGGTTGAGGAATGGCGTCGTCGCGCTCCATCAGCGGACGAGCAGCTGGACCGCTATAGACAACGCATG
CGCCGGCGGGTGGACAAGCTTGGCAAGCAATGGAATGACACCAAGGCCATCAGTATACGCGAAAAGATCTCTTTC
ATCTGCGCTGTCATCAACATTTTCATCAGTGGATATCTTATTGGCGGGTTTCCTCAGCACTTCCATGTCTGGTAC
ACCCTTCAGCTAGTGTACTTCATGCCTATTCGTTTCTTGACCTACCGGTCCCAGGGCTACCATTACTTCCTTGCC
GATCTGTGCTACTTTGTCAACGTGTTACTGAGTCTCAGTATCTGGGTTTTTCCCGAATCGAAGCGGCTCTTCACA
GCAGCCTACTGCTTAGCCTTTGGCAACAATGCTATCGCCATCGTCATGTGGCGCAACTCGCTTGTGTTTCACAGT
CTGGACAAGGTCACCTCTCTCTTCATTCACATCATGCCATGCGCAACGCTGCATTGTATCGTCCACCTACTTACT
CCGGAAGAGCAGAGGGAACGGTTTCCCGCTATTTCGATCATCAAAAACTCGTCTCCGGGCTCGCCCGCTGCGTAC
GCCAATGTCACATCTATGCTGACCTGGAGCACCATGCCATATGCTCTATGGCAGCTTGGCTACTACCTTCTCATT
ACAGTCCGTCGTCGGGACAAGATTGCAGCTGGTCGACCCACGTCATTCACCTGGATGCGCCGCTCCTACTCCAAT
ACCTGGCTAGGCAAGTTGGTTCTCTCACTCCCAGACCGACTACAAGAGCCGGCGTTCATGACGATTCAGTACAGC
TACGCTGTGTTGACGATGTTACCGTGCCCTATCTGGTTTGCAAACCAAATTGCGTCCACGGCCTTTCTCTCTGTA
CTCTTTGCGTGGAGCATCTATAACGGCTCAACCTATTATATTGACGTTTTTGGCAAGCGGTTTCAAAAAGAGCTG
GAAGTCATGAAATCGGAGGTTCTGAAATGGCCCAACATGCAAGATCCCACTTTTCAGCCTTCATCAACGACCCCA
CCTAATGAGGGGATTGCATTTGGGGCCTCTCCTAGCAAGCATTGA
Transcript >Hirsu2|2890
ATGGACGACGACGATCAAAATGACGCAAAAATGGCCCTTATCGGCGACCAGTCAGAACCAGAACCTGCACTCGAT
TCGCGGGCTACGCGCGCGGCCACAACTCCCTCTGACAGTGCCTCAGTCGAGCCGCCCTGTCTCCCAGCAACAAGT
AAACTGCACCGGAGGCTGTCACGAAACCCGTCCTTATCGGACAGCAGCTCTCATCATGAAGACTGGGATCCACTG
CCTCCACCTGACAAGTTGACCGTCCTTGACCTTCTTGACAACTTTGCACTGCCCCAGCAGCTTGAAAAACTCCAA
AGGGGCATATCGGCTCAAACTGACAAGGTTCGCCGGTCCAAGGACGCCTTGAAATCCAAGACGCAGTCCGCCCGG
GATCGCATGGTTGAGGAATGGCGTCGTCGCGCTCCATCAGCGGACGAGCAGCTGGACCGCTATAGACAACGCATG
CGCCGGCGGGTGGACAAGCTTGGCAAGCAATGGAATGACACCAAGGCCATCAGTATACGCGAAAAGATCTCTTTC
ATCTGCGCTGTCATCAACATTTTCATCAGTGGATATCTTATTGGCGGGTTTCCTCAGCACTTCCATGTCTGGTAC
ACCCTTCAGCTAGTGTACTTCATGCCTATTCGTTTCTTGACCTACCGGTCCCAGGGCTACCATTACTTCCTTGCC
GATCTGTGCTACTTTGTCAACGTGTTACTGAGTCTCAGTATCTGGGTTTTTCCCGAATCGAAGCGGCTCTTCACA
GCAGCCTACTGCTTAGCCTTTGGCAACAATGCTATCGCCATCGTCATGTGGCGCAACTCGCTTGTGTTTCACAGT
CTGGACAAGGTCACCTCTCTCTTCATTCACATCATGCCATGCGCAACGCTGCATTGTATCGTCCACCTACTTACT
CCGGAAGAGCAGAGGGAACGGTTTCCCGCTATTTCGATCATCAAAAACTCGTCTCCGGGCTCGCCCGCTGCGTAC
GCCAATGTCACATCTATGCTGACCTGGAGCACCATGCCATATGCTCTATGGCAGCTTGGCTACTACCTTCTCATT
ACAGTCCGTCGTCGGGACAAGATTGCAGCTGGTCGACCCACGTCATTCACCTGGATGCGCCGCTCCTACTCCAAT
ACCTGGCTAGGCAAGTTGGTTCTCTCACTCCCAGACCGACTACAAGAGCCGGCGTTCATGACGATTCAGTACAGC
TACGCTGTGTTGACGATGTTACCGTGCCCTATCTGGTTTGCAAACCAAATTGCGTCCACGGCCTTTCTCTCTGTA
CTCTTTGCGTGGAGCATCTATAACGGCTCAACCTATTATATTGACGTTTTTGGCAAGCGGTTTCAAAAAGAGCTG
GAAGTCATGAAATCGGAGGTTCTGAAATGGCCCAACATGCAAGATCCCACTTTTCAGCCTTCATCAACGACCCCA
CCTAATGAGGGGATTGCATTTGGGGCCTCTCCTAGCAAGCATTGA
Gene >Hirsu2|2890
ATGGACGACGACGATCAAAATGACGCAAAAATGGCCCTTATCGGCGACCAGTCAGAACCAGAACCTGCACTCGAT
TCGCGGGCTACGCGCGCGGCCACAACTCCCTCTGACAGTGCCTCAGTCGAGCCGCCCTGTCTCCCAGCAACAAGT
AAACTGCACCGGAGGCTGTCACGAAACCCGTCCTTATCGGACAGCAGCTCTCATCATGAAGACTGGGATCCACTG
CCTCCACCTGACAAGTTGACCGTCCTTGACCTTCTTGACAACTTTGCACTGCCCCAGCAGCTTGAAAAACTCCAA
AGGGGCATATCGGCTCAAACTGACAAGGTTCGCCGGTCCAAGGACGCCTTGAAATCCAAGACGCAGTCCGCCCGG
GATCGCATGGTTGAGGAATGGCGTCGTCGCGCTCCATCAGCGGACGAGCAGCTGGACCGCTATAGACAACGCATG
CGCCGGCGGGTGGACAAGCTTGGCAAGCAATGGAATGACACCAAGGCCATCAGTATACGCGAAAAGATCTCTTTC
ATCTGCGCTGTCATCAACATTTTCATCAGTGGATATCTTATTGGCGGGTTTCCTCAGCACTTCCATGTCTGGTAC
ACCCTTCAGCTAGTGTACTTCATGCCTATTCGTTTCTTGACCTACCGGTCCCAGGGCTACCATTACTTCCTTGCC
GATCTGTGCTACTTTGTCAACGTGTTACTGAGTCTCAGTATCTGGGTTTTTCCCGAATCGAAGCGGCTCTTCACA
GCAGCCTACTGCTTAGCCTTTGGCAACAATGCTATCGCCATCGTCATGTGGCGCAACTCGCTTGTGTTTCACAGT
CTGGACAAGGTCACCTCTCTCTTCATTCACATCATGCCATGCGCAACGCTGCATTGTATCGTCCACCTACTTACT
CCGGAAGAGCAGAGGGAACGGTTTCCCGCTATTTCGATCATCAAAAACTCGTCTCCGGGCTCGCCCGCTGCGTAC
GCCAATGTCACATCTATGCTGACCTGGAGCACCATGCCATATGCTCTATGGCAGCTTGGCTACTACCTTCTCATT
ACAGTCCGTCGTCGGGACAAGATTGCAGCTGGTCGACCCACGTCATTCACCTGGATGCGCCGCTCCTACTCCAAT
ACCTGGCTAGGCAAGTTGGTTCTCTCACTCCCAGACCGACTACAAGAGCCGGCGTTCATGACGATTCAGTACAGC
TACGCTGTGTTGACGATGTTACCGTGCCCTATCTGGTTTGCAAACCAAATTGCGTCCACGGCCTTTCTCTCTGTA
CTCTTTGCGTGGAGCATCTATAACGGCTCAACCTATTATATTGACGTTTTTGGCAAGCGGTTTCAAAAAGAGCTG
GAAGTCATGAAATCGGAGGTTCTGAAATGGCCCAACATGCAAGATCCCACTTTTCAGCCTTCATCAACGACCCCA
CCTAATGAGGGGATTGCATTTGGGGCCTCTCCTAGCAAGCATTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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