Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|287
Gene name
LocationContig_1053:3475..4909
Strand+
Gene length (bp)1434
Transcript length (bp)1227
Coding sequence length (bp)1227
Protein length (aa) 409

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5563 0.5138 0.385 0.0601 0.1728 0.1961 0.2613 0.1261 0.2202 0.0278

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 262 284 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9199
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|287 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|287
MRSSLAPLRLAPRGRGDLFFPWREGGKKAKAPSFPAVDSDWRSGCFRRDDEAGDRAAGRMDGAAKAGNGREKKKK
KEEGIQEYKIDYSENQKQVGRHRALRSWARVAESARRGSGAQAGVAGDVEARAYPVLYSHACRAGCSAAGRPPAS
IPGRASGLSLGPDRFNGYLAASFLLLILPLLDIDRLHLSFPFSSLSASRRPSIARRSPVVVIIRLQGNGPVQTAA
APIVTNPSSPRQVLRKTSGDFGPIKGRRSRAKRSAPAIFILPVLACLVSLALSFPLFFSPSSSLARSRSRAAGSD
CLYRILAAAAAAAEARDRLRRGPSAPVRSASARSAPWSAETADLQFQGLRHSPFACLPVSLLRSRGHVDFYLFPL
LFAPSALGLAMGRRAEVGEAWRPSCKWRAGEPL*
Coding >Hirsu2|287
ATGCGCTCCAGCCTCGCTCCGCTGCGCCTCGCCCCCCGGGGCCGAGGCGACCTCTTCTTCCCTTGGAGGGAGGGA
GGAAAGAAAGCAAAGGCGCCGTCCTTCCCCGCCGTCGACTCCGACTGGAGAAGCGGGTGCTTTCGACGAGATGAC
GAGGCCGGCGACCGCGCAGCAGGGAGAATGGACGGGGCGGCGAAGGCAGGAAACGGAAGGGAGAAGAAGAAAAAA
AAGGAAGAAGGGATTCAGGAATACAAAATAGATTACAGCGAGAATCAAAAACAAGTCGGCCGCCACAGGGCGCTC
CGGAGCTGGGCCCGGGTCGCCGAATCGGCCAGACGAGGCTCTGGCGCTCAGGCTGGCGTCGCAGGCGATGTGGAG
GCGAGGGCCTACCCTGTATTGTACAGCCACGCCTGTCGGGCTGGCTGCAGCGCTGCTGGGAGGCCCCCTGCGTCC
ATCCCGGGGCGTGCGTCGGGCCTGTCGCTTGGCCCTGATCGGTTCAACGGCTACCTCGCAGCCTCATTCCTCCTC
CTCATCCTCCCTCTCCTAGACATCGACCGGCTGCATCTCTCCTTTCCTTTCTCTTCTCTATCCGCTTCCCGCCGG
CCAAGCATCGCCCGTCGCTCTCCCGTCGTCGTCATCATCAGGCTGCAAGGGAACGGGCCCGTGCAAACAGCTGCA
GCCCCGATCGTCACAAACCCTTCATCTCCTCGCCAGGTTTTACGCAAGACATCCGGCGACTTTGGGCCAATCAAG
GGGCGCCGGTCGCGGGCGAAGCGCTCAGCACCAGCCATCTTCATATTACCTGTACTCGCCTGTCTCGTCTCTCTT
GCTCTCTCATTCCCTCTCTTCTTCTCTCCCTCTTCTTCTCTCGCTCGCTCTCGCTCGCGCGCTGCTGGATCCGAC
TGTCTGTATCGTATCTTAGCAGCAGCAGCAGCAGCAGCAGAAGCTCGCGATAGGCTGCGCCGTGGGCCTTCTGCG
CCCGTCCGCTCCGCTTCCGCCCGCAGCGCCCCATGGTCGGCAGAAACAGCTGACCTCCAATTCCAAGGCCTGCGG
CACAGCCCATTCGCCTGTCTTCCCGTCTCCCTGCTACGTAGCCGCGGCCACGTTGATTTTTATTTGTTTCCACTC
CTTTTCGCCCCCTCGGCTCTCGGTCTCGCGATGGGGCGGCGCGCCGAGGTCGGTGAGGCCTGGCGACCGAGCTGC
AAATGGCGCGCCGGGGAGCCGCTGTGA
Transcript >Hirsu2|287
ATGCGCTCCAGCCTCGCTCCGCTGCGCCTCGCCCCCCGGGGCCGAGGCGACCTCTTCTTCCCTTGGAGGGAGGGA
GGAAAGAAAGCAAAGGCGCCGTCCTTCCCCGCCGTCGACTCCGACTGGAGAAGCGGGTGCTTTCGACGAGATGAC
GAGGCCGGCGACCGCGCAGCAGGGAGAATGGACGGGGCGGCGAAGGCAGGAAACGGAAGGGAGAAGAAGAAAAAA
AAGGAAGAAGGGATTCAGGAATACAAAATAGATTACAGCGAGAATCAAAAACAAGTCGGCCGCCACAGGGCGCTC
CGGAGCTGGGCCCGGGTCGCCGAATCGGCCAGACGAGGCTCTGGCGCTCAGGCTGGCGTCGCAGGCGATGTGGAG
GCGAGGGCCTACCCTGTATTGTACAGCCACGCCTGTCGGGCTGGCTGCAGCGCTGCTGGGAGGCCCCCTGCGTCC
ATCCCGGGGCGTGCGTCGGGCCTGTCGCTTGGCCCTGATCGGTTCAACGGCTACCTCGCAGCCTCATTCCTCCTC
CTCATCCTCCCTCTCCTAGACATCGACCGGCTGCATCTCTCCTTTCCTTTCTCTTCTCTATCCGCTTCCCGCCGG
CCAAGCATCGCCCGTCGCTCTCCCGTCGTCGTCATCATCAGGCTGCAAGGGAACGGGCCCGTGCAAACAGCTGCA
GCCCCGATCGTCACAAACCCTTCATCTCCTCGCCAGGTTTTACGCAAGACATCCGGCGACTTTGGGCCAATCAAG
GGGCGCCGGTCGCGGGCGAAGCGCTCAGCACCAGCCATCTTCATATTACCTGTACTCGCCTGTCTCGTCTCTCTT
GCTCTCTCATTCCCTCTCTTCTTCTCTCCCTCTTCTTCTCTCGCTCGCTCTCGCTCGCGCGCTGCTGGATCCGAC
TGTCTGTATCGTATCTTAGCAGCAGCAGCAGCAGCAGCAGAAGCTCGCGATAGGCTGCGCCGTGGGCCTTCTGCG
CCCGTCCGCTCCGCTTCCGCCCGCAGCGCCCCATGGTCGGCAGAAACAGCTGACCTCCAATTCCAAGGCCTGCGG
CACAGCCCATTCGCCTGTCTTCCCGTCTCCCTGCTACGTAGCCGCGGCCACGTTGATTTTTATTTGTTTCCACTC
CTTTTCGCCCCCTCGGCTCTCGGTCTCGCGATGGGGCGGCGCGCCGAGGTCGGTGAGGCCTGGCGACCGAGCTGC
AAATGGCGCGCCGGGGAGCCGCTGTGA
Gene >Hirsu2|287
ATGCGCTCCAGCCTCGCTCCGCTGCGCCTCGCCCCCCGGGGCCGAGGCGACCTCTTCTTCCCTTGGAGGGAGGGA
GGAAAGAAAGCAAAGGCGCCGTCCTTCCCCGCCGTCGACTCCGACTGGAGAAGCGGGTGCTTTCGACGAGATGAC
GAGGCCGGCGACCGCGCAGCAGGGAGAATGGACGGGGCGGCGAAGGCAGGAAACGGAAGGGAGAAGAAGAAAAAA
AAGGAAGAAGGGATTCAGGAATACAAAATAGATTACAGCGAGAATCAAAAACAAGTCGGCCGCCACAGGGCGCTC
CGGAGCTGGGCCCGGGTCGCCGAATCGGCCAGACGAGGCTCTGGCGCTCAGGCTGGCGTCGCAGGCGATGTGGAG
GCGAGGGCCTACCCTGTATTGTACAGCCACGCCTGTCGGTACTCACCACTAGAGGTAGCTTAGTCCTGCTTCTCC
ACTCCATCCCGCAGATTCCGACCAGGGGGCGAGGTACCTGCCCGGCCGCCCTCGTGCCGCCGCGTGCACATGTAC
TCTTTTGGGACCTGCACCATCGCCAATTGCTTCAACACAGGGCTGGCTGCAGCGCTGCTGGGAGGCCCCCTGCGT
CCATCCCGGGGCGTGCGTCGGGCCTGTCGCTTGGCCCTGATCGGTTCAACGGCTACCTCGCAGCCTCATTCCTCC
TCCTCATCCTCCCTCTCCTAGACATCGACCGGCTGCATCTCTCCTTTCCTTTCTCTTCTCTATCCGCTTCCCGCC
GGCCAAGCATCGCCCGTCGCTCTCCCGTCGTCGTCATCATCAGGCTGCAAGGGAACGGGCCCGTGCAAACAGCTG
CAGCCCCGATCGTCACAAACCCTTCATCTCCTCGCCAGGTTTTACGCAAGACATCCGGCGACTTTGGGCCAATCA
AGGGGCGCCGGTCGCGGGCGAAGCGCTCAGCACCAGCCATCTTCATATTACCTGTACTCGCCTGTCTCGTCTCTC
TTGCTCTCTCATTCCCTCTCTTCTTCTCTCCCTCTTCTTCTCTCGCTCGCTCTCGCTCGCGCGCTGCTGGATCCG
ACTGTCTGTATCGTATCTGTCTGTGTATTCACCAAGGTATCGACTTGGCAACCCTACTCTAGCCTTCTAGCAGTA
GCAGCAGCAGCAGCAGCAGCAGAAGCTCGCGATAGGCTGCGCCGTGGGCCTTCTGCGCCCGTCCGCTCCGCTTCC
GCCCGCAGCGCCCCATGGTCGGCAGAAACAGCTGACCTCCAATTCCAAGGCCTGCGGCACAGCCCATTCGCCTGT
CTTCCCGTCTCCCTGCTACGTAGCCGCGGCCACGTTGATTTTTATTTGTTTCCACTCCTTTTCGCCCCCTCGGCT
CTCGGTCTCGCGATGGGGCGGCGCGCCGAGGTCGGTGAGGCCTGGCGACCGAGCTGCAAATGGCGCGCCGGGGAG
CCGCTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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