Protein ID | Hirsu2|286 |
Gene name | |
Location | Contig_1053:1315..3417 |
Strand | - |
Gene length (bp) | 2102 |
Transcript length (bp) | 1698 |
Coding sequence length (bp) | 1698 |
Protein length (aa) | 566 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08613 | Cyclin | Cyclin | 2.5E-29 | 403 | 508 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q06712|PREG_NEUCR | Nuc-1 negative regulatory protein preg OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=preg PE=1 SV=1 | 287 | 533 | 3.0E-82 |
sp|Q03900|YD132_YEAST | Uncharacterized protein YDR132C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR132C PE=1 SV=1 | 15 | 280 | 5.0E-50 |
sp|P20052|PHO80_YEAST | PHO85 cyclin PHO80 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHO80 PE=1 SV=3 | 361 | 510 | 1.0E-39 |
sp|Q12259|YL108_YEAST | BTB/POZ domain-containing protein YLR108C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR108C PE=1 SV=1 | 27 | 281 | 1.0E-36 |
sp|O80513|CCU41_ARATH | Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1 | 373 | 522 | 2.0E-22 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q06712|PREG_NEUCR | Nuc-1 negative regulatory protein preg OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=preg PE=1 SV=1 | 287 | 533 | 3.0E-82 |
sp|Q03900|YD132_YEAST | Uncharacterized protein YDR132C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR132C PE=1 SV=1 | 15 | 280 | 5.0E-50 |
sp|P20052|PHO80_YEAST | PHO85 cyclin PHO80 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHO80 PE=1 SV=3 | 361 | 510 | 1.0E-39 |
sp|Q12259|YL108_YEAST | BTB/POZ domain-containing protein YLR108C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR108C PE=1 SV=1 | 27 | 281 | 1.0E-36 |
sp|O80513|CCU41_ARATH | Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1 | 373 | 522 | 2.0E-22 |
sp|Q9LJ45|CCU11_ARATH | Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1 | 358 | 493 | 7.0E-19 |
sp|Q9SHD3|CCU21_ARATH | Cyclin-U2-1 OS=Arabidopsis thaliana GN=CYCU2-1 PE=1 SV=1 | 377 | 518 | 8.0E-19 |
sp|P40186|PCL7_YEAST | PHO85 cyclin-7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PCL7 PE=1 SV=3 | 375 | 518 | 3.0E-18 |
sp|Q75HV0|CCP31_ORYSJ | Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1 | 403 | 526 | 4.0E-18 |
sp|O42979|PSL1_SCHPO | PHO85 cyclin-like protein psl1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=psl1 PE=3 SV=1 | 375 | 518 | 9.0E-18 |
sp|Q9M205|CCU22_ARATH | Cyclin-U2-2 OS=Arabidopsis thaliana GN=CYCU2-2 PE=1 SV=1 | 399 | 518 | 1.0E-17 |
sp|Q9LY16|CCU42_ARATH | Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1 | 402 | 508 | 7.0E-17 |
sp|Q9FKF6|CCU43_ARATH | Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1 | 381 | 508 | 7.0E-17 |
sp|Q7XC35|CCP41_ORYSJ | Cyclin-P4-1 OS=Oryza sativa subsp. japonica GN=CYCP4-1 PE=2 SV=1 | 405 | 543 | 2.0E-16 |
sp|Q8LB60|CCU31_ARATH | Cyclin-U3-1 OS=Arabidopsis thaliana GN=CYCU3-1 PE=1 SV=2 | 392 | 515 | 4.0E-15 |
sp|Q0J9W0|CCP11_ORYSJ | Cyclin-P1-1 OS=Oryza sativa subsp. japonica GN=CYCP1-1 PE=3 SV=2 | 378 | 518 | 5.0E-13 |
sp|Q7FAT5|CCP21_ORYSJ | Cyclin-P2-1 OS=Oryza sativa subsp. japonica GN=CYCP2-1 PE=2 SV=1 | 405 | 529 | 2.0E-10 |
sp|P40038|PCL6_YEAST | PHO85 cyclin-6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PCL6 PE=1 SV=1 | 450 | 518 | 8.0E-09 |
GO Term | Description | Terminal node |
---|---|---|
GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | Yes |
GO:0019901 | protein kinase binding | Yes |
GO:0019900 | kinase binding | No |
GO:0042325 | regulation of phosphorylation | No |
GO:0019899 | enzyme binding | No |
GO:0008150 | biological_process | No |
GO:0065009 | regulation of molecular function | No |
GO:0005488 | binding | No |
GO:0043549 | regulation of kinase activity | No |
GO:0071900 | regulation of protein serine/threonine kinase activity | No |
GO:0050794 | regulation of cellular process | No |
GO:0031323 | regulation of cellular metabolic process | No |
GO:0051174 | regulation of phosphorus metabolic process | No |
GO:0019220 | regulation of phosphate metabolic process | No |
GO:0019222 | regulation of metabolic process | No |
GO:1904029 | regulation of cyclin-dependent protein kinase activity | No |
GO:0065007 | biological regulation | No |
GO:0051726 | regulation of cell cycle | No |
GO:0051171 | regulation of nitrogen compound metabolic process | No |
GO:0060255 | regulation of macromolecule metabolic process | No |
GO:0051246 | regulation of protein metabolic process | No |
GO:0051338 | regulation of transferase activity | No |
GO:0001932 | regulation of protein phosphorylation | No |
GO:0045859 | regulation of protein kinase activity | No |
GO:0003674 | molecular_function | No |
GO:0031399 | regulation of protein modification process | No |
GO:0080090 | regulation of primary metabolic process | No |
GO:0050790 | regulation of catalytic activity | No |
GO:0005515 | protein binding | No |
GO:0050789 | regulation of biological process | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.3144 | 0.8467 | 0.2369 | 0.0376 | 0.0528 | 0.0017 | 0.0717 | 0.0115 | 0.029 | 0.0092 |
Orthofinder run ID | 4 |
Orthogroup | 5065 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|286 MASASPSDGHSDGHGSTPVVMRPPSERNVAKIPEILPHARVFPIQIGSELFKLSGASLSSDAPSYFSQYFLCQMR AAEENGDEMAGAVRTLYIDRDPATFRDIALHLQGYHVTPRDGTHFVRLFSDAQFYSLPKLTSQLFEESIFISIGH REFQIPRDLLTSPTNSPNYFSLGFAAFFTRPDNMFPGLDREGVIRPPAILPPSVPNRSADTFADLLRLLRGYPVE IRDEVHRQELLRDARYFHFKGLEQQLIPHAISYNPLRRRDEIVLRLENVQKSGVSVAQEPPPPPPPPSRPAAIPP LAPPSTARLGAEPSPSPNKRRGSPGRAITGGGTPGQGPDGHTGPRPEPEASSKRARANERPPKILPQRYEQCAVE DMVELIAHMLAELIATNDAIRISSGGLTRFHSRTAPGISVRDYLHRLARHATLTPPLLLAMVYYIDRLCALYPEF TINTLTVHRFLITAATVAAKGLSDSFWNNTTYARVGGVRVAELKLLELEFLYRVDWKIVPNPEVLVAYYRGLVER TPAYALQLDESSGDDMDDDDDDNNNGDHIDDAATAPEGLP* |
Coding | >Hirsu2|286 ATGGCGTCGGCGAGCCCGAGCGACGGCCACAGCGACGGCCACGGCTCGACGCCCGTCGTCATGAGGCCGCCGTCG GAGAGGAACGTGGCCAAGATCCCCGAGATCCTGCCGCACGCCCGCGTCTTCCCCATCCAGATCGGCAGCGAGCTC TTCAAGCTGTCCGGCGCCTCGCTCTCCTCCGACGCTCCGTCGTACTTCTCGCAGTACTTCCTCTGCCAGATGCGG GCGGCGGAGGAGAACGGCGACGAGATGGCCGGCGCCGTGCGCACGCTCTACATCGACCGCGACCCGGCCACGTTT CGCGACATCGCGCTGCACCTGCAAGGATATCACGTCACGCCCCGGGATGGGACGCATTTCGTGCGACTCTTTTCG GACGCTCAGTTCTACAGCCTCCCCAAACTCACGTCGCAGCTGTTCGAGGAGAGCATCTTCATCTCCATCGGCCAC CGCGAGTTCCAGATCCCGCGCGACCTGCTGACGAGCCCGACCAACTCGCCCAACTACTTCTCCCTCGGCTTCGCC GCCTTCTTCACCCGGCCCGACAACATGTTCCCGGGGCTGGACCGCGAGGGCGTGATCCGGCCGCCGGCCATCCTG CCGCCGTCGGTGCCGAACCGGTCGGCCGACACCTTCGCCGACCTGCTGCGCCTGCTGCGCGGCTACCCGGTCGAG ATCCGCGACGAGGTGCACCGCCAGGAGCTGCTTCGCGACGCCCGCTACTTCCACTTCAAGGGGCTCGAGCAGCAG CTGATACCGCACGCCATCAGCTACAACCCGCTGCGGCGGCGCGACGAGATCGTCCTGCGGCTGGAGAACGTGCAG AAGAGCGGCGTCAGCGTGGCCCAGGAGCCGCCGCCGCCGCCGCCGCCGCCGTCGCGACCGGCCGCCATCCCCCCC CTCGCACCGCCGTCGACGGCGCGCCTCGGCGCCGAGCCGTCTCCGTCGCCTAACAAGAGGAGGGGCTCTCCGGGC CGGGCCATTACCGGCGGGGGGACGCCTGGTCAAGGGCCGGACGGCCACACCGGCCCCCGCCCGGAGCCCGAGGCC TCGTCCAAGAGGGCCAGGGCCAACGAGCGGCCGCCGAAAATCCTGCCCCAGCGATACGAGCAGTGCGCCGTCGAG GACATGGTGGAGCTGATTGCGCACATGCTGGCCGAGCTCATCGCCACAAACGACGCGATCCGCATCTCCAGCGGC GGCCTGACGCGCTTCCACTCCAGAACGGCGCCCGGCATATCGGTGCGCGACTACCTACACCGGCTGGCGAGGCAC GCCACACTGACTCCGCCGCTCCTGCTGGCCATGGTCTATTACATCGACCGACTGTGCGCGCTCTACCCGGAGTTC ACCATCAACACGCTGACGGTCCATCGGTTCCTCATCACGGCCGCCACCGTCGCCGCAAAGGGCCTGTCCGACTCG TTCTGGAACAACACGACGTACGCCCGAGTGGGCGGCGTGCGCGTCGCCGAGCTGAAGCTGCTCGAGCTCGAGTTC CTCTACCGCGTCGACTGGAAGATCGTGCCGAACCCCGAGGTGCTGGTGGCCTATTACCGAGGCCTGGTGGAGCGC ACGCCGGCGTATGCGCTCCAGCTGGACGAGTCCTCGGGCGATGACATGGATGACGACGACGACGACAACAACAAC GGCGACCACATTGACGACGCTGCGACAGCCCCTGAGGGGCTACCGTGA |
Transcript | >Hirsu2|286 ATGGCGTCGGCGAGCCCGAGCGACGGCCACAGCGACGGCCACGGCTCGACGCCCGTCGTCATGAGGCCGCCGTCG GAGAGGAACGTGGCCAAGATCCCCGAGATCCTGCCGCACGCCCGCGTCTTCCCCATCCAGATCGGCAGCGAGCTC TTCAAGCTGTCCGGCGCCTCGCTCTCCTCCGACGCTCCGTCGTACTTCTCGCAGTACTTCCTCTGCCAGATGCGG GCGGCGGAGGAGAACGGCGACGAGATGGCCGGCGCCGTGCGCACGCTCTACATCGACCGCGACCCGGCCACGTTT CGCGACATCGCGCTGCACCTGCAAGGATATCACGTCACGCCCCGGGATGGGACGCATTTCGTGCGACTCTTTTCG GACGCTCAGTTCTACAGCCTCCCCAAACTCACGTCGCAGCTGTTCGAGGAGAGCATCTTCATCTCCATCGGCCAC CGCGAGTTCCAGATCCCGCGCGACCTGCTGACGAGCCCGACCAACTCGCCCAACTACTTCTCCCTCGGCTTCGCC GCCTTCTTCACCCGGCCCGACAACATGTTCCCGGGGCTGGACCGCGAGGGCGTGATCCGGCCGCCGGCCATCCTG CCGCCGTCGGTGCCGAACCGGTCGGCCGACACCTTCGCCGACCTGCTGCGCCTGCTGCGCGGCTACCCGGTCGAG ATCCGCGACGAGGTGCACCGCCAGGAGCTGCTTCGCGACGCCCGCTACTTCCACTTCAAGGGGCTCGAGCAGCAG CTGATACCGCACGCCATCAGCTACAACCCGCTGCGGCGGCGCGACGAGATCGTCCTGCGGCTGGAGAACGTGCAG AAGAGCGGCGTCAGCGTGGCCCAGGAGCCGCCGCCGCCGCCGCCGCCGCCGTCGCGACCGGCCGCCATCCCCCCC CTCGCACCGCCGTCGACGGCGCGCCTCGGCGCCGAGCCGTCTCCGTCGCCTAACAAGAGGAGGGGCTCTCCGGGC CGGGCCATTACCGGCGGGGGGACGCCTGGTCAAGGGCCGGACGGCCACACCGGCCCCCGCCCGGAGCCCGAGGCC TCGTCCAAGAGGGCCAGGGCCAACGAGCGGCCGCCGAAAATCCTGCCCCAGCGATACGAGCAGTGCGCCGTCGAG GACATGGTGGAGCTGATTGCGCACATGCTGGCCGAGCTCATCGCCACAAACGACGCGATCCGCATCTCCAGCGGC GGCCTGACGCGCTTCCACTCCAGAACGGCGCCCGGCATATCGGTGCGCGACTACCTACACCGGCTGGCGAGGCAC GCCACACTGACTCCGCCGCTCCTGCTGGCCATGGTCTATTACATCGACCGACTGTGCGCGCTCTACCCGGAGTTC ACCATCAACACGCTGACGGTCCATCGGTTCCTCATCACGGCCGCCACCGTCGCCGCAAAGGGCCTGTCCGACTCG TTCTGGAACAACACGACGTACGCCCGAGTGGGCGGCGTGCGCGTCGCCGAGCTGAAGCTGCTCGAGCTCGAGTTC CTCTACCGCGTCGACTGGAAGATCGTGCCGAACCCCGAGGTGCTGGTGGCCTATTACCGAGGCCTGGTGGAGCGC ACGCCGGCGTATGCGCTCCAGCTGGACGAGTCCTCGGGCGATGACATGGATGACGACGACGACGACAACAACAAC GGCGACCACATTGACGACGCTGCGACAGCCCCTGAGGGGCTACCGTGA |
Gene | >Hirsu2|286 ATGGCGTCGGCGAGCCCGAGCGACGGCCACAGCGACGGCCACGGCTCGACGCCCGTCGTCATGAGGCCGCCGTCG GAGAGGAACGTGGCCAAGATCCCCGAGATCCTGCCGCACGCCCGCGTCTTCCCCATCCAGATCGGCAGCGAGCTC TTCAAGCTGTCCGGCGCCTCGCTCTCCTCCGACGGTCAGTCCCTCTCCTCTCTCTCCCTCTCTCTCTCCCTCTCT CTCTCTCGCTTCCGCCATGGAAAGAAGGCAAAGCCGGCTGACAGGGCGAGACGGAACCAAAAAAAAAAACCAACA AAAAAACAGCTCCGTCGTACTTCTCGCAGTACTTCCTCTGCCAGATGCGGGCGGCGGAGGAGAACGGCGACGAGA TGGCCGGCGCCGTGCGCACGCTCTACATCGACCGCGACCCGGCCACGTTTCGCGACATCGCGCTGCACCTGCAAG GATATCACGTCACGCCCCGGGATGGGACGCATTTCGTGCGACTCTTTTCGGACGCTCAGTTCTACAGCCGTGCGT CGCCTCCCGTCTCGTGAAACCCGTGTGTGTGTGTGTGCCATGCCTGGCGAGCCCGAAGAGAAGAGGGGGAGAGGG GAAGAGAGAGAGAGAGAAGAGAGAAGCAGAGAGAGACTGTTTGTGTGAGAGAGGTGGACGGCGCTGACCAAAACG TGGCGCGAACCGTCGTTTTCCCTTGCCCGCGGGCCAGTCCCCAAACTCACGTCGCAGCTGTTCGAGGAGAGCATC TTCATCTCCATCGGCCACCGCGAGTTCCAGATCCCGCGCGACCTGCTGACGAGCCCGACCAACTCGCCCAACTAC TTCTCCCTCGGCTTCGCCGCCTTCTTCACCCGGCCCGACAACATGTTCCCGGGGCTGGACCGCGAGGGCGTGATC CGGCCGCCGGCCATCCTGCCGCCGTCGGTGCCGAACCGGTCGGCCGACACCTTCGCCGACCTGCTGCGCCTGCTG CGCGGCTACCCGGTCGAGATCCGCGACGAGGTGCACCGCCAGGAGCTGCTTCGCGACGCCCGCTACTTCCACTTC AAGGGGCTCGAGCAGCAGCTGATACCGCACGCCATCAGCTACAACCCGCTGCGGCGGCGCGACGAGATCGTCCTG CGGCTGGAGAACGTGCAGAAGAGCGGCGTCAGCGTGGCCCAGGAGCCGCCGCCGCCGCCGCCGCCGCCGTCGCGA CCGGCCGCCATCCCCCCCCTCGCACCGCCGTCGACGGCGCGCCTCGGCGCCGAGCCGTCTCCGTCGCCTAACAAG AGGAGGGGCTCTCCGGGCCGGGCCATTACCGGCGGGGGGACGCCTGGTCAAGGGCCGGACGGCCACACCGGCCCC CGCCCGGAGCCCGAGGCCTCGTCCAAGAGGGCCAGGGCCAACGAGCGGCCGCCGAAAATCCTGCCCCAGCGATAC GAGCAGTGCGCCGTCGAGGACATGGTGGAGCTGATTGCGCACATGCTGGCCGAGCTCATCGCCACAAACGACGCG ATCCGCATCTCCAGCGGCGGCCTGACGCGCTTCCACTCCAGGTAGGCGGCGCCAAACAAGCAGGCGATGCCAACC CCCTCCCCTTCCTCGTCCTCTTCTCCCGTCCGTCCCTGACCATGGCCCGCAGAACGGCGCCCGGCATATCGGTGC GCGACTACCTACACCGGCTGGCGAGGCACGCCACACTGACTCCGCCGCTCCTGCTGGCCATGGTCTATTACATCG ACCGACTGTGCGCGCTCTACCCGGAGTTCACCATCAACACGCTGACGGTCCATCGGTTCCTCATCACGGCCGCCA CCGTCGCCGCAAAGGGCCTGTCCGACTCGTTCTGGAACAACACGACGTACGCCCGAGTGGGCGGCGTGCGCGTCG CCGAGCTGAAGCTGCTCGAGCTCGAGTTCCTCTACCGCGTCGACTGGAAGATCGTGCCGAACCCCGAGGTGCTGG TGGCCTATTACCGAGGCCTGGTGGAGCGCACGCCGGCGTATGCGCTCCAGCTGGACGAGTCCTCGGGCGATGACA TGGATGACGACGACGACGACAACAACAACGGCGACCACATTGACGACGCTGCGACAGCCCCTGAGGGGCTACCGT GA |