Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|2859
Gene name
Location	Contig_1704:759..1700
Strand	-
Gene length (bp)	941
Transcript length (bp)	729
Coding sequence length (bp)	729
Protein length (aa)	243

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09430	EMC7_beta-sandw	ER membrane protein complex subunit 7, beta-sandwich domain	5.1E-20	27	151

Swissprot hits

[Show all]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q0IHY5\|EMC7_XENTR	ER membrane protein complex subunit 7 OS=Xenopus tropicalis GN=emc7 PE=2 SV=1	43	178	3.0E-10
sp\|Q9EP72\|EMC7_MOUSE	ER membrane protein complex subunit 7 OS=Mus musculus GN=Emc7 PE=1 SV=1	43	178	8.0E-10
sp\|Q9NPA0\|EMC7_HUMAN	ER membrane protein complex subunit 7 OS=Homo sapiens GN=EMC7 PE=1 SV=1	43	178	1.0E-09
sp\|A5PJA8\|EMC7_BOVIN	ER membrane protein complex subunit 7 OS=Bos taurus GN=EMC7 PE=2 SV=1	43	178	2.0E-09
sp\|Q4R5V2\|EMC7_MACFA	ER membrane protein complex subunit 7 OS=Macaca fascicularis GN=EMC7 PE=2 SV=1	43	178	3.0E-09

[Show all]

[Show less]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q0IHY5\|EMC7_XENTR	ER membrane protein complex subunit 7 OS=Xenopus tropicalis GN=emc7 PE=2 SV=1	43	178	3.0E-10
sp\|Q9EP72\|EMC7_MOUSE	ER membrane protein complex subunit 7 OS=Mus musculus GN=Emc7 PE=1 SV=1	43	178	8.0E-10
sp\|Q9NPA0\|EMC7_HUMAN	ER membrane protein complex subunit 7 OS=Homo sapiens GN=EMC7 PE=1 SV=1	43	178	1.0E-09
sp\|A5PJA8\|EMC7_BOVIN	ER membrane protein complex subunit 7 OS=Bos taurus GN=EMC7 PE=2 SV=1	43	178	2.0E-09
sp\|Q4R5V2\|EMC7_MACFA	ER membrane protein complex subunit 7 OS=Macaca fascicularis GN=EMC7 PE=2 SV=1	43	178	3.0E-09
sp\|Q8VY97\|Y4213_ARATH	ER membrane protein complex subunit 7 homolog OS=Arabidopsis thaliana GN=At4g32130 PE=2 SV=1	56	184	6.0E-08

[Show less]

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Endoplasmic reticulum	Signal peptide	0.1018	0.1143	0.2498	0.1249	0.139	0.0057	0.6096	0.0526	0.1224	0.0289

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	147	166	19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	4
Orthogroup	2233
Change Orthofinder run

Species	Protein ID
Ophiocordyceps australis 1348a (Ghana)	OphauG2\|5505
Ophiocordyceps australis map64 (Brazil)	OphauB2\|5139
Ophiocordyceps camponoti-floridani	Ophcf2\|01574
Ophiocordyceps camponoti-rufipedis	Ophun1\|2353
Ophiocordyceps kimflemingae	Ophio5\|5578
Ophiocordyceps subramaniannii	Hirsu2\|2859 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|2859 MRPSAALLLAAPAAASTVTLYLPSQPNPFALPARTHATLVSLGARAAAPLSAVNTFVFRNVTPGSYLVDVHCPVE AFRPLRLDVAAAADAPLAAWETFRGNGWDDRGEALPLREGSAGPGFELRPLGRKQYFLERPRFSILSILKNPMIL MGLVSMLLFIGMPYLLDNMDPEMKAEFEAQQRKGPMAAMMGGAGGGQQAANPLGNFDMAAFLAGSKPREDAAAAA DDAAAADGPARNQGVRR*
Coding	>Hirsu2\|2859 ATGCGCCCTTCCGCCGCGCTGCTGCTCGCCGCCCCGGCCGCCGCCTCGACGGTGACGCTCTACCTGCCCTCGCAG CCGAACCCGTTCGCGCTGCCGGCGCGCACGCACGCGACGCTGGTCTCGCTCGGCGCCCGCGCCGCCGCCCCGCTG TCGGCCGTCAACACCTTCGTCTTCCGCAACGTCACGCCCGGCTCGTACCTCGTCGACGTCCACTGCCCCGTCGAG GCCTTCCGCCCGCTGCGCCTCGACGTTGCCGCTGCCGCCGACGCGCCCCTCGCCGCTTGGGAGACGTTCCGCGGC AATGGCTGGGATGATAGGGGCGAGGCGCTGCCGCTGAGGGAGGGTAGCGCGGGGCCGGGCTTTGAGCTGCGGCCG CTGGGGCGGAAGCAGTACTTTCTCGAGAGGCCGCGATTCTCCATCCTCAGCATCCTCAAGAACCCCATGATCCTG ATGGGCCTCGTCAGCATGCTCCTCTTCATCGGCATGCCCTACCTCCTCGACAACATGGACCCGGAGATGAAGGCC GAGTTCGAGGCCCAGCAGCGCAAGGGCCCCATGGCCGCCATGATGGGCGGCGCCGGCGGCGGCCAGCAGGCCGCC AACCCGCTCGGCAACTTCGACATGGCCGCCTTCCTGGCCGGCTCCAAGCCGAGGGAGGACGCTGCTGCTGCTGCC GACGACGCCGCTGCCGCCGACGGGCCCGCCCGGAACCAGGGCGTCAGGAGGTGA
Transcript	>Hirsu2\|2859 ATGCGCCCTTCCGCCGCGCTGCTGCTCGCCGCCCCGGCCGCCGCCTCGACGGTGACGCTCTACCTGCCCTCGCAG CCGAACCCGTTCGCGCTGCCGGCGCGCACGCACGCGACGCTGGTCTCGCTCGGCGCCCGCGCCGCCGCCCCGCTG TCGGCCGTCAACACCTTCGTCTTCCGCAACGTCACGCCCGGCTCGTACCTCGTCGACGTCCACTGCCCCGTCGAG GCCTTCCGCCCGCTGCGCCTCGACGTTGCCGCTGCCGCCGACGCGCCCCTCGCCGCTTGGGAGACGTTCCGCGGC AATGGCTGGGATGATAGGGGCGAGGCGCTGCCGCTGAGGGAGGGTAGCGCGGGGCCGGGCTTTGAGCTGCGGCCG CTGGGGCGGAAGCAGTACTTTCTCGAGAGGCCGCGATTCTCCATCCTCAGCATCCTCAAGAACCCCATGATCCTG ATGGGCCTCGTCAGCATGCTCCTCTTCATCGGCATGCCCTACCTCCTCGACAACATGGACCCGGAGATGAAGGCC GAGTTCGAGGCCCAGCAGCGCAAGGGCCCCATGGCCGCCATGATGGGCGGCGCCGGCGGCGGCCAGCAGGCCGCC AACCCGCTCGGCAACTTCGACATGGCCGCCTTCCTGGCCGGCTCCAAGCCGAGGGAGGACGCTGCTGCTGCTGCC GACGACGCCGCTGCCGCCGACGGGCCCGCCCGGAACCAGGGCGTCAGGAGGTGA
Gene	>Hirsu2\|2859 ATGCGCCCTTCCGCCGCGCTGCTGCTCGCCGCCCCGGCCGCCGCCTCGACGGTGACGCTCTACCTGCCCTCGCAG CCGAACCCGTTCGCGCTGCCGGCGCGCACGCACGCGACGCTGGTCTCGCTCGGCGCCCGCGCCGCCGCCCCGCTG TCGGCCGTCAACACCTTCGTCTTCCGCAACGTCACGCCCGGCTCGTACCTCGTCGACGTCCACTGCCCCGTCGAG GCCTTCCGCCCGCTGCGCCTCGACGTTGCCGCTGCCGCCGACGCGCCCCTCGCCGCTTGGGAGACGTTCCGCGGC AATGGCTGGGATGATAGGGGCGAGGCGCTGCCGCTGAGGGAGGGTAGCGCGGGGCCGGGCTTTGAGCTGCGGCCG CTGGGGCGGAAGCAGTACTTTCTCGAGAGGCCGCGATGTGAGTTTGGACTTAGTCTCTTCTTTTCTTTCTCTCTC TCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTCTGTGTTTGCAGCGCTTCCGATTCACGGCACACCGATT CGTGGCCCGACCTCGTCTCACTCGTCGCTAACGCCACCCAGTCTCCATCCTCAGCATCCTCAAGAACCCCATGAT CCTGATGGGCCTCGTCAGCATGCTCCTCTTCATCGGCATGCCCTACCTCCTCGACAACAGTACGTTTTCCCCCTC CCCCCTCTGCTCCCGGGCCCCGCCCCCTTTGACGCCCGCCAGTGGACCCGGAGATGAAGGCCGAGTTCGAGGCCC AGCAGCGCAAGGGCCCCATGGCCGCCATGATGGGCGGCGCCGGCGGCGGCCAGCAGGCCGCCAACCCGCTCGGCA ACTTCGACATGGCCGCCTTCCTGGCCGGCTCCAAGCCGAGGGAGGACGCTGCTGCTGCTGCCGACGACGCCGCTG CCGCCGACGGGCCCGCCCGGAACCAGGGCGTCAGGAGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail