Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2859
Gene name
LocationContig_1704:759..1700
Strand-
Gene length (bp)941
Transcript length (bp)729
Coding sequence length (bp)729
Protein length (aa) 243

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09430 EMC7_beta-sandw ER membrane protein complex subunit 7, beta-sandwich domain 5.1E-20 27 151

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q0IHY5|EMC7_XENTR ER membrane protein complex subunit 7 OS=Xenopus tropicalis GN=emc7 PE=2 SV=1 43 178 3.0E-10
sp|Q9EP72|EMC7_MOUSE ER membrane protein complex subunit 7 OS=Mus musculus GN=Emc7 PE=1 SV=1 43 178 8.0E-10
sp|Q9NPA0|EMC7_HUMAN ER membrane protein complex subunit 7 OS=Homo sapiens GN=EMC7 PE=1 SV=1 43 178 1.0E-09
sp|A5PJA8|EMC7_BOVIN ER membrane protein complex subunit 7 OS=Bos taurus GN=EMC7 PE=2 SV=1 43 178 2.0E-09
sp|Q4R5V2|EMC7_MACFA ER membrane protein complex subunit 7 OS=Macaca fascicularis GN=EMC7 PE=2 SV=1 43 178 3.0E-09
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Swissprot ID Swissprot Description Start End E-value
sp|Q0IHY5|EMC7_XENTR ER membrane protein complex subunit 7 OS=Xenopus tropicalis GN=emc7 PE=2 SV=1 43 178 3.0E-10
sp|Q9EP72|EMC7_MOUSE ER membrane protein complex subunit 7 OS=Mus musculus GN=Emc7 PE=1 SV=1 43 178 8.0E-10
sp|Q9NPA0|EMC7_HUMAN ER membrane protein complex subunit 7 OS=Homo sapiens GN=EMC7 PE=1 SV=1 43 178 1.0E-09
sp|A5PJA8|EMC7_BOVIN ER membrane protein complex subunit 7 OS=Bos taurus GN=EMC7 PE=2 SV=1 43 178 2.0E-09
sp|Q4R5V2|EMC7_MACFA ER membrane protein complex subunit 7 OS=Macaca fascicularis GN=EMC7 PE=2 SV=1 43 178 3.0E-09
sp|Q8VY97|Y4213_ARATH ER membrane protein complex subunit 7 homolog OS=Arabidopsis thaliana GN=At4g32130 PE=2 SV=1 56 184 6.0E-08
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide 0.1018 0.1143 0.2498 0.1249 0.139 0.0057 0.6096 0.0526 0.1224 0.0289

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 147 166 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2233
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5505
Ophiocordyceps australis map64 (Brazil) OphauB2|5139
Ophiocordyceps camponoti-floridani Ophcf2|01574
Ophiocordyceps camponoti-rufipedis Ophun1|2353
Ophiocordyceps kimflemingae Ophio5|5578
Ophiocordyceps subramaniannii Hirsu2|2859 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2859
MRPSAALLLAAPAAASTVTLYLPSQPNPFALPARTHATLVSLGARAAAPLSAVNTFVFRNVTPGSYLVDVHCPVE
AFRPLRLDVAAAADAPLAAWETFRGNGWDDRGEALPLREGSAGPGFELRPLGRKQYFLERPRFSILSILKNPMIL
MGLVSMLLFIGMPYLLDNMDPEMKAEFEAQQRKGPMAAMMGGAGGGQQAANPLGNFDMAAFLAGSKPREDAAAAA
DDAAAADGPARNQGVRR*
Coding >Hirsu2|2859
ATGCGCCCTTCCGCCGCGCTGCTGCTCGCCGCCCCGGCCGCCGCCTCGACGGTGACGCTCTACCTGCCCTCGCAG
CCGAACCCGTTCGCGCTGCCGGCGCGCACGCACGCGACGCTGGTCTCGCTCGGCGCCCGCGCCGCCGCCCCGCTG
TCGGCCGTCAACACCTTCGTCTTCCGCAACGTCACGCCCGGCTCGTACCTCGTCGACGTCCACTGCCCCGTCGAG
GCCTTCCGCCCGCTGCGCCTCGACGTTGCCGCTGCCGCCGACGCGCCCCTCGCCGCTTGGGAGACGTTCCGCGGC
AATGGCTGGGATGATAGGGGCGAGGCGCTGCCGCTGAGGGAGGGTAGCGCGGGGCCGGGCTTTGAGCTGCGGCCG
CTGGGGCGGAAGCAGTACTTTCTCGAGAGGCCGCGATTCTCCATCCTCAGCATCCTCAAGAACCCCATGATCCTG
ATGGGCCTCGTCAGCATGCTCCTCTTCATCGGCATGCCCTACCTCCTCGACAACATGGACCCGGAGATGAAGGCC
GAGTTCGAGGCCCAGCAGCGCAAGGGCCCCATGGCCGCCATGATGGGCGGCGCCGGCGGCGGCCAGCAGGCCGCC
AACCCGCTCGGCAACTTCGACATGGCCGCCTTCCTGGCCGGCTCCAAGCCGAGGGAGGACGCTGCTGCTGCTGCC
GACGACGCCGCTGCCGCCGACGGGCCCGCCCGGAACCAGGGCGTCAGGAGGTGA
Transcript >Hirsu2|2859
ATGCGCCCTTCCGCCGCGCTGCTGCTCGCCGCCCCGGCCGCCGCCTCGACGGTGACGCTCTACCTGCCCTCGCAG
CCGAACCCGTTCGCGCTGCCGGCGCGCACGCACGCGACGCTGGTCTCGCTCGGCGCCCGCGCCGCCGCCCCGCTG
TCGGCCGTCAACACCTTCGTCTTCCGCAACGTCACGCCCGGCTCGTACCTCGTCGACGTCCACTGCCCCGTCGAG
GCCTTCCGCCCGCTGCGCCTCGACGTTGCCGCTGCCGCCGACGCGCCCCTCGCCGCTTGGGAGACGTTCCGCGGC
AATGGCTGGGATGATAGGGGCGAGGCGCTGCCGCTGAGGGAGGGTAGCGCGGGGCCGGGCTTTGAGCTGCGGCCG
CTGGGGCGGAAGCAGTACTTTCTCGAGAGGCCGCGATTCTCCATCCTCAGCATCCTCAAGAACCCCATGATCCTG
ATGGGCCTCGTCAGCATGCTCCTCTTCATCGGCATGCCCTACCTCCTCGACAACATGGACCCGGAGATGAAGGCC
GAGTTCGAGGCCCAGCAGCGCAAGGGCCCCATGGCCGCCATGATGGGCGGCGCCGGCGGCGGCCAGCAGGCCGCC
AACCCGCTCGGCAACTTCGACATGGCCGCCTTCCTGGCCGGCTCCAAGCCGAGGGAGGACGCTGCTGCTGCTGCC
GACGACGCCGCTGCCGCCGACGGGCCCGCCCGGAACCAGGGCGTCAGGAGGTGA
Gene >Hirsu2|2859
ATGCGCCCTTCCGCCGCGCTGCTGCTCGCCGCCCCGGCCGCCGCCTCGACGGTGACGCTCTACCTGCCCTCGCAG
CCGAACCCGTTCGCGCTGCCGGCGCGCACGCACGCGACGCTGGTCTCGCTCGGCGCCCGCGCCGCCGCCCCGCTG
TCGGCCGTCAACACCTTCGTCTTCCGCAACGTCACGCCCGGCTCGTACCTCGTCGACGTCCACTGCCCCGTCGAG
GCCTTCCGCCCGCTGCGCCTCGACGTTGCCGCTGCCGCCGACGCGCCCCTCGCCGCTTGGGAGACGTTCCGCGGC
AATGGCTGGGATGATAGGGGCGAGGCGCTGCCGCTGAGGGAGGGTAGCGCGGGGCCGGGCTTTGAGCTGCGGCCG
CTGGGGCGGAAGCAGTACTTTCTCGAGAGGCCGCGATGTGAGTTTGGACTTAGTCTCTTCTTTTCTTTCTCTCTC
TCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTCTGTGTTTGCAGCGCTTCCGATTCACGGCACACCGATT
CGTGGCCCGACCTCGTCTCACTCGTCGCTAACGCCACCCAGTCTCCATCCTCAGCATCCTCAAGAACCCCATGAT
CCTGATGGGCCTCGTCAGCATGCTCCTCTTCATCGGCATGCCCTACCTCCTCGACAACAGTACGTTTTCCCCCTC
CCCCCTCTGCTCCCGGGCCCCGCCCCCTTTGACGCCCGCCAGTGGACCCGGAGATGAAGGCCGAGTTCGAGGCCC
AGCAGCGCAAGGGCCCCATGGCCGCCATGATGGGCGGCGCCGGCGGCGGCCAGCAGGCCGCCAACCCGCTCGGCA
ACTTCGACATGGCCGCCTTCCTGGCCGGCTCCAAGCCGAGGGAGGACGCTGCTGCTGCTGCCGACGACGCCGCTG
CCGCCGACGGGCCCGCCCGGAACCAGGGCGTCAGGAGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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