Protein ID | Hirsu2|285 |
Gene name | |
Location | Contig_1053:12..378 |
Strand | + |
Gene length (bp) | 366 |
Transcript length (bp) | 216 |
Coding sequence length (bp) | 216 |
Protein length (aa) | 72 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08601 | PAP1 | Transcription factor PAP1 | 5.4E-21 | 1 | 57 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | Nuclear localization signal|Nuclear export signal | 0.6692 | 0.8423 | 0.0029 | 0.0685 | 0.2911 | 0.0307 | 0.0974 | 0.0572 | 0.0617 | 0.0072 |
Orthofinder run ID | 4 |
Orthogroup | 776 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|285 LANQNGGQFDPQLFGDYREPQDSLLSNPDLDDFFNDALDADFMTPYNLPPAATAAAAAHSSSEAARIVSEA* |
Coding | >Hirsu2|285 CTGGCGAACCAGAACGGCGGCCAGTTCGACCCGCAGCTGTTCGGCGACTACCGCGAGCCCCAGGACAGCCTCCTG TCCAACCCGGACCTGGACGACTTCTTCAACGACGCCCTCGACGCCGACTTCATGACGCCCTACAACCTGCCCCCG GCGGCGACGGCGGCCGCGGCGGCGCACAGCAGCAGCGAGGCGGCGCGCATCGTATCGGAGGCCTAG |
Transcript | >Hirsu2|285 CTGGCGAACCAGAACGGCGGCCAGTTCGACCCGCAGCTGTTCGGCGACTACCGCGAGCCCCAGGACAGCCTCCTG TCCAACCCGGACCTGGACGACTTCTTCAACGACGCCCTCGACGCCGACTTCATGACGCCCTACAACCTGCCCCCG GCGGCGACGGCGGCCGCGGCGGCGCACAGCAGCAGCGAGGCGGCGCGCATCGTATCGGAGGCCTAG |
Gene | >Hirsu2|285 CTGGCGAACCAGAACGGCGGCCAGTTCGACCCGCAGCTGTTCGGCGACTACCGCGAGCCCCAGGACAGCCTCCTG TCCAACCCGGACCTGGACGACTTCTTCAACGACGCCCTCGACGCCGACTTCATGACGCCCTACAACCTGCCCCCG GCGGCGACGGCGGCCGCGGCGGCGCACAGCAGCAGCGAGGCGGCGCGCATCGTGTGCTCCCCTTTCTCGCTATCC CCTGTTTTTCCTTCGTTTCGTTTTTTTTTTTCCCTTTGCTTGGCTTCGTCTGTCGGCCTCTTGCCTCGTCGTCTT CCCGCCCCCCTCGTACTTCGGGCGAGCCTTGCGCGATTGATGCTCGTCTCGAGATCGGAGGCCTAG |