Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|285
Gene name
LocationContig_1053:12..378
Strand+
Gene length (bp)366
Transcript length (bp)216
Coding sequence length (bp)216
Protein length (aa) 72

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08601 PAP1 Transcription factor PAP1 5.4E-21 1 57

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal|Nuclear export signal 0.6692 0.8423 0.0029 0.0685 0.2911 0.0307 0.0974 0.0572 0.0617 0.0072

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup776
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|734
Ophiocordyceps australis map64 (Brazil) OphauB2|448
Ophiocordyceps camponoti-floridani Ophcf2|01247
Ophiocordyceps camponoti-rufipedis Ophun1|3244
Ophiocordyceps kimflemingae Ophio5|2204
Ophiocordyceps subramaniannii Hirsu2|285 (this protein)
Ophiocordyceps subramaniannii Hirsu2|4006

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|285
LANQNGGQFDPQLFGDYREPQDSLLSNPDLDDFFNDALDADFMTPYNLPPAATAAAAAHSSSEAARIVSEA*
Coding >Hirsu2|285
CTGGCGAACCAGAACGGCGGCCAGTTCGACCCGCAGCTGTTCGGCGACTACCGCGAGCCCCAGGACAGCCTCCTG
TCCAACCCGGACCTGGACGACTTCTTCAACGACGCCCTCGACGCCGACTTCATGACGCCCTACAACCTGCCCCCG
GCGGCGACGGCGGCCGCGGCGGCGCACAGCAGCAGCGAGGCGGCGCGCATCGTATCGGAGGCCTAG
Transcript >Hirsu2|285
CTGGCGAACCAGAACGGCGGCCAGTTCGACCCGCAGCTGTTCGGCGACTACCGCGAGCCCCAGGACAGCCTCCTG
TCCAACCCGGACCTGGACGACTTCTTCAACGACGCCCTCGACGCCGACTTCATGACGCCCTACAACCTGCCCCCG
GCGGCGACGGCGGCCGCGGCGGCGCACAGCAGCAGCGAGGCGGCGCGCATCGTATCGGAGGCCTAG
Gene >Hirsu2|285
CTGGCGAACCAGAACGGCGGCCAGTTCGACCCGCAGCTGTTCGGCGACTACCGCGAGCCCCAGGACAGCCTCCTG
TCCAACCCGGACCTGGACGACTTCTTCAACGACGCCCTCGACGCCGACTTCATGACGCCCTACAACCTGCCCCCG
GCGGCGACGGCGGCCGCGGCGGCGCACAGCAGCAGCGAGGCGGCGCGCATCGTGTGCTCCCCTTTCTCGCTATCC
CCTGTTTTTCCTTCGTTTCGTTTTTTTTTTTCCCTTTGCTTGGCTTCGTCTGTCGGCCTCTTGCCTCGTCGTCTT
CCCGCCCCCCTCGTACTTCGGGCGAGCCTTGCGCGATTGATGCTCGTCTCGAGATCGGAGGCCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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