© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2849 |
| Gene name | |
| Location | Contig_1701:436..894 |
| Strand | + |
| Gene length (bp) | 458 |
| Transcript length (bp) | 399 |
| Coding sequence length (bp) | 399 |
| Protein length (aa) | 133 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03169 | OPT | OPT oligopeptide transporter protein | 9.4E-31 | 9 | 132 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P53134|YGL4_YEAST | Putative oligopeptide transporter YGL114W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL114W PE=1 SV=1 | 9 | 132 | 5.0E-24 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
| GO:0042887 | amide transmembrane transporter activity | No |
| GO:1904680 | peptide transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 9 | 31 | 22 |
| 2 | 35 | 57 | 22 |
| 3 | 70 | 92 | 22 |
| 4 | 107 | 129 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2849 MSAFRDQFLTIRSVAAGLLVGTVFCAANVYFGLQTGWVSIMSMPASLMGFGLFRLLRRHLSFPFTPVENVLLQSV ACGMAIMPLGCGFVGVIPAMNYLLKPEEKGPLSLSTTQLVAWSLGLCYFGVVFAVPL* |
| Coding | >Hirsu2|2849 ATGTCTGCTTTTCGAGATCAGTTTCTCACGATCCGCAGCGTGGCTGCGGGCCTCCTCGTGGGCACCGTCTTTTGT GCGGCTAACGTGTACTTCGGCCTTCAGACAGGATGGGTGTCCATCATGTCCATGCCCGCCAGCCTCATGGGCTTC GGCCTATTTCGGCTATTGCGCCGACATCTATCTTTCCCTTTCACCCCCGTTGAGAACGTTCTCCTCCAAAGTGTT GCATGTGGCATGGCCATCATGCCCCTCGGCTGTGGCTTTGTTGGCGTCATTCCGGCCATGAATTACCTGTTGAAG CCGGAGGAGAAGGGCCCTTTGTCTCTAAGCACTACTCAACTTGTGGCCTGGTCCTTGGGCCTCTGCTACTTCGGT GTGGTCTTTGCCGTGCCCCTGTGA |
| Transcript | >Hirsu2|2849 ATGTCTGCTTTTCGAGATCAGTTTCTCACGATCCGCAGCGTGGCTGCGGGCCTCCTCGTGGGCACCGTCTTTTGT GCGGCTAACGTGTACTTCGGCCTTCAGACAGGATGGGTGTCCATCATGTCCATGCCCGCCAGCCTCATGGGCTTC GGCCTATTTCGGCTATTGCGCCGACATCTATCTTTCCCTTTCACCCCCGTTGAGAACGTTCTCCTCCAAAGTGTT GCATGTGGCATGGCCATCATGCCCCTCGGCTGTGGCTTTGTTGGCGTCATTCCGGCCATGAATTACCTGTTGAAG CCGGAGGAGAAGGGCCCTTTGTCTCTAAGCACTACTCAACTTGTGGCCTGGTCCTTGGGCCTCTGCTACTTCGGT GTGGTCTTTGCCGTGCCCCTGTGA |
| Gene | >Hirsu2|2849 ATGTCTGCTTTTCGAGATCAGTTTCTCACGATCCGCAGCGTGGCTGCGGGCCTCCTCGTGGGCACCGTCTTTTGT GCGGCTAACGTGTACTTCGGCCTTCAGACAGGATGGGTGTCCATCATGTCCATGCCCGCCAGCCTCATGGGCTTC GGCCTATTTCGGCTATTGCGCCGACATCTATCTTTCCCTTTCACCCCCGTTGAGAACGTTCTCCTCCAAAGTGTT GCATGTGGCATGGCCATCATGCCCCTCGGCTGTGGCTTTGTTGGCGTCGTTAGTGGAGTCTCCGTACTACTACAA TGCGCACACCAAGCTAATAACATCTTCCACAGATTCCGGCCATGAATTACCTGTTGAAGCCGGAGGAGAAGGGCC CTTTGTCTCTAAGCACTACTCAACTTGTGGCCTGGTCCTTGGGCCTCTGCTACTTCGGTGTGGTCTTTGCCGTGC CCCTGTGA |