Protein ID | Hirsu2|2840 |
Gene name | |
Location | Contig_170:8557..9010 |
Strand | - |
Gene length (bp) | 453 |
Transcript length (bp) | 375 |
Coding sequence length (bp) | 375 |
Protein length (aa) | 125 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0661 | 0.05 | 0.9233 | 0.0706 | 0.0899 | 0.0107 | 0.0971 | 0.1093 | 0.0614 | 0.004 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 16 | 0.999477 |
Orthofinder run ID | 4 |
Orthogroup | 132 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2840 MKFSLVTLALAGVACANTGYVAAASDAEMTEFLETNATPGLDIGKLLGGLKPLLKKAKCVAPAVIKAADGLKCDG KGPLGTLCGSVDHIVKESEGAIKKCGVDKSTTGTVTKVLKDLCEKGKSY* |
Coding | >Hirsu2|2840 ATGAAGTTCTCGCTCGTCACCCTCGCTCTCGCCGGCGTCGCCTGCGCCAACACCGGGTACGTGGCCGCGGCCAGC GACGCGGAGATGACCGAGTTCCTCGAGACCAACGCCACGCCCGGGCTCGACATCGGCAAGCTGCTCGGCGGGCTC AAGCCGCTGCTGAAGAAGGCCAAGTGCGTGGCGCCGGCGGTGATCAAGGCGGCGGACGGCCTCAAGTGCGACGGC AAGGGCCCGCTGGGGACGCTCTGCGGCAGCGTCGACCACATCGTCAAGGAGAGCGAGGGCGCCATCAAGAAGTGC GGCGTCGACAAGTCCACGACCGGCACCGTCACCAAGGTCCTCAAGGATCTGTGCGAGAAGGGCAAGAGCTACTAG |
Transcript | >Hirsu2|2840 ATGAAGTTCTCGCTCGTCACCCTCGCTCTCGCCGGCGTCGCCTGCGCCAACACCGGGTACGTGGCCGCGGCCAGC GACGCGGAGATGACCGAGTTCCTCGAGACCAACGCCACGCCCGGGCTCGACATCGGCAAGCTGCTCGGCGGGCTC AAGCCGCTGCTGAAGAAGGCCAAGTGCGTGGCGCCGGCGGTGATCAAGGCGGCGGACGGCCTCAAGTGCGACGGC AAGGGCCCGCTGGGGACGCTCTGCGGCAGCGTCGACCACATCGTCAAGGAGAGCGAGGGCGCCATCAAGAAGTGC GGCGTCGACAAGTCCACGACCGGCACCGTCACCAAGGTCCTCAAGGATCTGTGCGAGAAGGGCAAGAGCTACTAG |
Gene | >Hirsu2|2840 ATGAAGTTCTCGCTCGTCACCCTCGCTCTCGCCGGCGTCGCCTGCGCCAACACCGGGTACGTGGCCGCGGCCAGC GACGCGGAGATGACCGAGTTCCTCGAGACCAACGCCACGCCCGGGCTCGACATCGGCAAGCTGCTCGGCGGGCTC AAGCCGCTGCTGAAGAAGGCCAAGTGCGTGGCGCCGGCGGTGATCAAGGCGGCGGACGGCCTCAAGTGCGACGGC AAGGGCCCGCTGGGGACGCTCTGCGGCAGCGTCGACCACATCGTCAAGGAGAGCGAGGGCGCCATCAAGAAGTGC GGCGTCGACAAGTCCACGACCGGTGAGTGCAGCCGACGACGTCCTCTGACCAAGAAGCGAGGGAGAAGGCGTGAC AGGCGGGCTGACGATGCATCCACAGGCACCGTCACCAAGGTCCTCAAGGATCTGTGCGAGAAGGGCAAGAGCTAC TAG |