Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|284
Gene name
LocationContig_1052:7744..8761
Strand+
Gene length (bp)1017
Transcript length (bp)1017
Coding sequence length (bp)1017
Protein length (aa) 339

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06687 SUR7 SUR7/PalI family 2.8E-32 9 256

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005886 plasma membrane Yes
GO:0005575 cellular_component No
GO:0044464 cell part No
GO:0016020 membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 80 102 22
3 164 186 22
4 196 218 22
5 239 261 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|284
MAVGRFVCVSVPLVLTIAAIISLLVATLSGVTHNSLYVFRVNISGLSVNPSSLGDLRNLVNIPQVKPRADLPAIL
GKLPLAGGNITAAAFGVGGVVDVNLWGFCTTDKDGKRECTKSQFDWASRELNTTRLEGLGDAVGVKVNLPNEVQD
GLKAFAALAKWTEVAFIVALVALGIELVVGILSTFSRVISCLTWLTAGVTAVLVGVAAGLATAMGSLVVGTVEAT
ARAYGVKGDIGGRFLAACWLAFAFATAAAFFWFFTICCCKPGDRRSRGGGVRHRDTPDGEKLMPSRAYAPIGNEN
EMSGGGFAHQGPTPSHPPRYPGGTGRADLAYEPYSHRV*
Coding >Hirsu2|284
ATGGCCGTCGGTCGCTTCGTCTGCGTCTCGGTCCCGCTCGTCCTGACCATCGCCGCCATCATCAGCCTCCTGGTG
GCCACGCTGTCGGGCGTCACCCACAACAGCCTCTACGTCTTCCGCGTCAACATCTCGGGCCTGTCCGTCAACCCC
AGCTCGCTAGGCGACCTGCGGAACCTGGTCAACATCCCCCAGGTCAAGCCCCGGGCCGACCTGCCCGCCATCCTC
GGCAAGCTGCCCCTGGCCGGCGGCAACATCACGGCGGCCGCCTTTGGCGTCGGCGGCGTCGTCGACGTCAACCTC
TGGGGCTTCTGCACCACCGACAAGGATGGCAAGCGGGAGTGCACCAAGTCCCAGTTCGACTGGGCCTCGCGCGAG
CTCAACACGACCCGGCTCGAGGGCCTCGGCGATGCCGTCGGCGTCAAGGTCAACCTGCCCAATGAGGTCCAGGAC
GGCCTCAAGGCTTTCGCCGCCCTGGCCAAGTGGACCGAGGTGGCCTTCATCGTCGCCCTCGTCGCCCTCGGCATC
GAGCTCGTCGTCGGCATCTTGTCGACCTTCTCGCGCGTCATCTCGTGCCTGACGTGGCTGACGGCCGGCGTCACG
GCCGTCCTGGTCGGCGTCGCCGCCGGCCTCGCCACCGCCATGGGCAGCCTCGTCGTCGGCACCGTCGAGGCCACC
GCCCGCGCCTACGGCGTCAAGGGCGACATCGGCGGCCGCTTCCTGGCCGCCTGCTGGCTCGCCTTCGCCTTCGCC
ACCGCCGCCGCCTTCTTCTGGTTCTTCACCATCTGCTGCTGCAAGCCGGGCGACAGGCGCAGCCGCGGCGGCGGT
GTGCGTCACCGCGACACCCCCGACGGCGAGAAGCTGATGCCGTCGCGCGCCTACGCGCCCATCGGCAACGAGAAC
GAGATGAGCGGCGGAGGCTTCGCCCACCAAGGCCCGACGCCGTCGCACCCGCCGCGCTACCCCGGCGGGACTGGC
CGGGCGGACCTGGCCTACGAGCCCTATTCTCACCGCGTGTAG
Transcript >Hirsu2|284
ATGGCCGTCGGTCGCTTCGTCTGCGTCTCGGTCCCGCTCGTCCTGACCATCGCCGCCATCATCAGCCTCCTGGTG
GCCACGCTGTCGGGCGTCACCCACAACAGCCTCTACGTCTTCCGCGTCAACATCTCGGGCCTGTCCGTCAACCCC
AGCTCGCTAGGCGACCTGCGGAACCTGGTCAACATCCCCCAGGTCAAGCCCCGGGCCGACCTGCCCGCCATCCTC
GGCAAGCTGCCCCTGGCCGGCGGCAACATCACGGCGGCCGCCTTTGGCGTCGGCGGCGTCGTCGACGTCAACCTC
TGGGGCTTCTGCACCACCGACAAGGATGGCAAGCGGGAGTGCACCAAGTCCCAGTTCGACTGGGCCTCGCGCGAG
CTCAACACGACCCGGCTCGAGGGCCTCGGCGATGCCGTCGGCGTCAAGGTCAACCTGCCCAATGAGGTCCAGGAC
GGCCTCAAGGCTTTCGCCGCCCTGGCCAAGTGGACCGAGGTGGCCTTCATCGTCGCCCTCGTCGCCCTCGGCATC
GAGCTCGTCGTCGGCATCTTGTCGACCTTCTCGCGCGTCATCTCGTGCCTGACGTGGCTGACGGCCGGCGTCACG
GCCGTCCTGGTCGGCGTCGCCGCCGGCCTCGCCACCGCCATGGGCAGCCTCGTCGTCGGCACCGTCGAGGCCACC
GCCCGCGCCTACGGCGTCAAGGGCGACATCGGCGGCCGCTTCCTGGCCGCCTGCTGGCTCGCCTTCGCCTTCGCC
ACCGCCGCCGCCTTCTTCTGGTTCTTCACCATCTGCTGCTGCAAGCCGGGCGACAGGCGCAGCCGCGGCGGCGGT
GTGCGTCACCGCGACACCCCCGACGGCGAGAAGCTGATGCCGTCGCGCGCCTACGCGCCCATCGGCAACGAGAAC
GAGATGAGCGGCGGAGGCTTCGCCCACCAAGGCCCGACGCCGTCGCACCCGCCGCGCTACCCCGGCGGGACTGGC
CGGGCGGACCTGGCCTACGAGCCCTATTCTCACCGCGTGTAG
Gene >Hirsu2|284
ATGGCCGTCGGTCGCTTCGTCTGCGTCTCGGTCCCGCTCGTCCTGACCATCGCCGCCATCATCAGCCTCCTGGTG
GCCACGCTGTCGGGCGTCACCCACAACAGCCTCTACGTCTTCCGCGTCAACATCTCGGGCCTGTCCGTCAACCCC
AGCTCGCTAGGCGACCTGCGGAACCTGGTCAACATCCCCCAGGTCAAGCCCCGGGCCGACCTGCCCGCCATCCTC
GGCAAGCTGCCCCTGGCCGGCGGCAACATCACGGCGGCCGCCTTTGGCGTCGGCGGCGTCGTCGACGTCAACCTC
TGGGGCTTCTGCACCACCGACAAGGATGGCAAGCGGGAGTGCACCAAGTCCCAGTTCGACTGGGCCTCGCGCGAG
CTCAACACGACCCGGCTCGAGGGCCTCGGCGATGCCGTCGGCGTCAAGGTCAACCTGCCCAATGAGGTCCAGGAC
GGCCTCAAGGCTTTCGCCGCCCTGGCCAAGTGGACCGAGGTGGCCTTCATCGTCGCCCTCGTCGCCCTCGGCATC
GAGCTCGTCGTCGGCATCTTGTCGACCTTCTCGCGCGTCATCTCGTGCCTGACGTGGCTGACGGCCGGCGTCACG
GCCGTCCTGGTCGGCGTCGCCGCCGGCCTCGCCACCGCCATGGGCAGCCTCGTCGTCGGCACCGTCGAGGCCACC
GCCCGCGCCTACGGCGTCAAGGGCGACATCGGCGGCCGCTTCCTGGCCGCCTGCTGGCTCGCCTTCGCCTTCGCC
ACCGCCGCCGCCTTCTTCTGGTTCTTCACCATCTGCTGCTGCAAGCCGGGCGACAGGCGCAGCCGCGGCGGCGGT
GTGCGTCACCGCGACACCCCCGACGGCGAGAAGCTGATGCCGTCGCGCGCCTACGCGCCCATCGGCAACGAGAAC
GAGATGAGCGGCGGAGGCTTCGCCCACCAAGGCCCGACGCCGTCGCACCCGCCGCGCTACCCCGGCGGGACTGGC
CGGGCGGACCTGGCCTACGAGCCCTATTCTCACCGCGTGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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