© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|283 |
| Gene name | |
| Location | Contig_1052:3109..3853 |
| Strand | - |
| Gene length (bp) | 744 |
| Transcript length (bp) | 576 |
| Coding sequence length (bp) | 576 |
| Protein length (aa) | 192 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.5461 | 0.6068 | 0.4644 | 0.0585 | 0.1114 | 0.1815 | 0.0942 | 0.0846 | 0.0426 | 0.0054 |
| Orthofinder run ID | 4 |
| Orthogroup | 9183 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|283 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|283 MRLSPHPCPRPLRPTSTSHTVHTPPAITGLPARASALDLIRIADPRLAPTSTAPIPTTQRCEAPRRHHRRQSYHR PPPPPDARVPRPRQARRTPQGFHAPPSSPSSAACFIPHSAASGRASPTSLLRPLLASVALPPPRPTDRPTRLGQA RRHFARPSAGQEGRTQIIPRAPPSLPSLLAPTRHLRHSPAD* |
| Coding | >Hirsu2|283 ATGCGCCTCTCGCCCCATCCTTGCCCACGGCCTCTCCGCCCAACGAGTACCTCCCATACAGTACACACTCCTCCG GCTATTACTGGTCTGCCAGCCCGAGCCAGCGCCCTTGATCTGATTCGTATCGCCGACCCTCGTCTGGCCCCAACT TCCACCGCTCCGATTCCGACCACCCAGCGCTGCGAGGCCCCACGACGTCATCACCGCCGACAGTCTTACCATCGC CCGCCTCCCCCTCCGGACGCGCGAGTCCCTCGCCCAAGACAAGCAAGACGGACGCCCCAAGGCTTCCACGCTCCG CCTTCTTCTCCCTCCTCGGCCGCCTGTTTCATCCCCCATAGCGCTGCCTCGGGGCGCGCGTCGCCGACGTCGCTG CTCCGCCCGCTGCTCGCCTCCGTCGCCCTGCCGCCTCCCCGACCGACCGACCGACCGACTCGTCTCGGCCAGGCC CGCCGTCATTTCGCTCGTCCGTCGGCCGGCCAAGAAGGGCGCACACAAATCATCCCCCGCGCCCCTCCCTCCCTC CCCTCCCTCCTTGCCCCCACGCGACATTTGAGACACTCGCCCGCCGACTGA |
| Transcript | >Hirsu2|283 ATGCGCCTCTCGCCCCATCCTTGCCCACGGCCTCTCCGCCCAACGAGTACCTCCCATACAGTACACACTCCTCCG GCTATTACTGGTCTGCCAGCCCGAGCCAGCGCCCTTGATCTGATTCGTATCGCCGACCCTCGTCTGGCCCCAACT TCCACCGCTCCGATTCCGACCACCCAGCGCTGCGAGGCCCCACGACGTCATCACCGCCGACAGTCTTACCATCGC CCGCCTCCCCCTCCGGACGCGCGAGTCCCTCGCCCAAGACAAGCAAGACGGACGCCCCAAGGCTTCCACGCTCCG CCTTCTTCTCCCTCCTCGGCCGCCTGTTTCATCCCCCATAGCGCTGCCTCGGGGCGCGCGTCGCCGACGTCGCTG CTCCGCCCGCTGCTCGCCTCCGTCGCCCTGCCGCCTCCCCGACCGACCGACCGACCGACTCGTCTCGGCCAGGCC CGCCGTCATTTCGCTCGTCCGTCGGCCGGCCAAGAAGGGCGCACACAAATCATCCCCCGCGCCCCTCCCTCCCTC CCCTCCCTCCTTGCCCCCACGCGACATTTGAGACACTCGCCCGCCGACTGA |
| Gene | >Hirsu2|283 ATGCGCCTCTCGCCCCATCCTTGCCCGTCCGTCTTCTCTCCTCTTCTCTTCCCCTTCTCTCTGCTTCGCCTCGCC TTTTCCCCTCGTCTTCTGCCTCCTGCATTCGCTCTTTTTTTTTCCCCTCCTCTCTTGTCTCATCATCCTCGCCTC GCCGCCCCGCCGCCCTGTCTCTGACCTGCTCGTCAAATACGAAGACGGCCTCTCCGCCCAACGAGTACCTCCCAT ACAGTACACACTCCTCCGGCTATTACTGGTCTGCCAGCCCGAGCCAGCGCCCTTGATCTGATTCGTATCGCCGAC CCTCGTCTGGCCCCAACTTCCACCGCTCCGATTCCGACCACCCAGCGCTGCGAGGCCCCACGACGTCATCACCGC CGACAGTCTTACCATCGCCCGCCTCCCCCTCCGGACGCGCGAGTCCCTCGCCCAAGACAAGCAAGACGGACGCCC CAAGGCTTCCACGCTCCGCCTTCTTCTCCCTCCTCGGCCGCCTGTTTCATCCCCCATAGCGCTGCCTCGGGGCGC GCGTCGCCGACGTCGCTGCTCCGCCCGCTGCTCGCCTCCGTCGCCCTGCCGCCTCCCCGACCGACCGACCGACCG ACTCGTCTCGGCCAGGCCCGCCGTCATTTCGCTCGTCCGTCGGCCGGCCAAGAAGGGCGCACACAAATCATCCCC CGCGCCCCTCCCTCCCTCCCCTCCCTCCTTGCCCCCACGCGACATTTGAGACACTCGCCCGCCGACTGA |