Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2828
Gene name
LocationContig_17:52786..54205
Strand-
Gene length (bp)1419
Transcript length (bp)1419
Coding sequence length (bp)1419
Protein length (aa) 473

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08493 AflR Aflatoxin regulatory protein 3.1E-21 179 361
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 3.0E-07 53 85

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P43651|AFLR_ASPPA Aflatoxin biosynthesis regulatory protein OS=Aspergillus parasiticus GN=aflR PE=2 SV=3 261 470 2.0E-16
sp|P41765|AFLR_ASPFN Aflatoxin biosynthesis regulatory protein OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=aflR PE=3 SV=2 261 469 3.0E-16
sp|P43651|AFLR_ASPPA Aflatoxin biosynthesis regulatory protein OS=Aspergillus parasiticus GN=aflR PE=2 SV=3 49 92 3.0E-10
sp|P41765|AFLR_ASPFN Aflatoxin biosynthesis regulatory protein OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=aflR PE=3 SV=2 49 92 3.0E-10
sp|P52957|AFLR_EMENI Sterigmatocystin biosynthesis regulatory protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=aflR PE=3 SV=2 47 93 4.0E-10

GO

GO Term Description Terminal node
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0005634 nucleus Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0045122 aflatoxin biosynthetic process Yes
GO:0003677 DNA binding Yes
GO:0065007 biological regulation No
GO:0044237 cellular metabolic process No
GO:0031323 regulation of cellular metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0010468 regulation of gene expression No
GO:0003676 nucleic acid binding No
GO:0071704 organic substance metabolic process No
GO:0043229 intracellular organelle No
GO:0019222 regulation of metabolic process No
GO:0043385 mycotoxin metabolic process No
GO:0050794 regulation of cellular process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0005488 binding No
GO:0044550 secondary metabolite biosynthetic process No
GO:0046872 metal ion binding No
GO:0008152 metabolic process No
GO:0043169 cation binding No
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0043226 organelle No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0031326 regulation of cellular biosynthetic process No
GO:0043386 mycotoxin biosynthetic process No
GO:0043227 membrane-bounded organelle No
GO:0009987 cellular process No
GO:1901363 heterocyclic compound binding No
GO:2001141 regulation of RNA biosynthetic process No
GO:1901378 organic heteropentacyclic compound biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0043167 ion binding No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0019748 secondary metabolic process No
GO:0044424 intracellular part No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0009404 toxin metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0050789 regulation of biological process No
GO:0046222 aflatoxin metabolic process No
GO:0009058 biosynthetic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:1901376 organic heteropentacyclic compound metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0044464 cell part No
GO:0043231 intracellular membrane-bounded organelle No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:2000112 regulation of cellular macromolecule biosynthetic process No
GO:0140110 transcription regulator activity No
GO:0009403 toxin biosynthetic process No
GO:0003700 DNA-binding transcription factor activity No
GO:1901360 organic cyclic compound metabolic process No
GO:0046914 transition metal ion binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2828
MSHGAALMARIDTRETSSRVPFRIERVMQDSHPSARVQKSRESGSTTSKIRDSCHACALSKVRCPKEKPICSRCE
KRSTACEYFVTKRPGRKRHNSQVAYNNNTISVGGSALAEEDVTDRQSPSSRSSIPPALTPSSPAGHRSGAGEVSC
YTDIFADLLTPLDPPLTPGMSGARTHFHDLLTPSMNFLDLESLDPNLSNYVHGHHDIAELLTSEDTDPEPSSVSS
SLACTIPSKPCSPVSDRPALSFRREIVAAQSGSMGCCMGQALDLMNSLFSSEDTSSSSFLQGASTASNIAAHNGN
SSIEKVVAQNKQSIAVANKMLQCPCQKTGYLTATLSMIVFKILERYAAAARYNPDAAGFEKGESRLSGSRRPGLA
KGGYPGSPNDGGAKRMTAQLILSELHRVQGLVNKLAPRLNAQGKGVNPDKHPQTMASECFETTTGSFSANTLGQM
ETDLRKRLAALSSEIISVLRYS*
Coding >Hirsu2|2828
ATGTCCCACGGCGCCGCCCTCATGGCCCGCATCGACACACGCGAGACGTCGAGTCGCGTCCCCTTCCGAATCGAA
CGTGTCATGCAGGACTCGCACCCCAGCGCCCGGGTCCAAAAGAGCCGAGAATCGGGTTCCACGACGTCCAAGATT
CGCGACAGCTGCCACGCCTGTGCCCTGTCCAAGGTGCGATGTCCGAAAGAGAAGCCAATATGCTCGCGGTGCGAG
AAACGCAGCACTGCCTGCGAGTATTTCGTTACGAAGCGTCCCGGGAGGAAGCGACACAACAGCCAGGTCGCATAT
AATAATAATACCATCAGCGTCGGCGGTTCAGCTCTCGCAGAGGAAGACGTCACAGACCGACAATCCCCGAGCAGT
CGATCCTCAATTCCTCCAGCGCTGACCCCATCCTCGCCGGCCGGCCATCGGTCTGGCGCCGGCGAGGTCTCCTGT
TACACTGATATCTTCGCCGACCTCTTGACGCCCCTGGATCCCCCGCTGACCCCCGGGATGTCTGGCGCGAGAACT
CATTTCCATGACCTCCTCACGCCGTCGATGAACTTCTTAGACCTGGAGTCGCTAGACCCCAACTTGTCAAATTAC
GTCCACGGACATCATGATATCGCCGAGCTGCTCACCTCGGAAGACACGGATCCCGAACCCTCGTCTGTCTCGTCC
TCGCTGGCCTGCACAATCCCATCCAAGCCCTGCTCGCCAGTCTCGGACAGACCGGCGCTCTCATTTCGCAGGGAG
ATTGTCGCGGCGCAGTCAGGATCCATGGGCTGCTGCATGGGGCAAGCCCTGGACCTCATGAACAGCCTCTTCTCT
TCCGAGGACACCTCTTCATCATCCTTCTTGCAAGGTGCCAGCACGGCATCGAACATCGCCGCGCATAACGGCAAT
TCCTCGATTGAGAAAGTAGTTGCTCAGAACAAGCAATCCATAGCAGTCGCGAACAAGATGTTGCAATGCCCGTGT
CAAAAAACCGGCTACTTGACCGCCACGCTATCCATGATCGTGTTCAAGATTCTGGAGCGATACGCCGCAGCGGCA
CGATATAACCCGGATGCAGCAGGCTTCGAAAAAGGCGAGAGTAGGCTCAGTGGCAGTCGGAGGCCGGGACTCGCA
AAAGGTGGTTATCCCGGCTCGCCCAACGACGGTGGCGCCAAGCGAATGACAGCGCAGCTGATCCTCAGTGAGCTG
CATCGAGTGCAAGGACTTGTAAATAAGCTTGCGCCGCGACTCAATGCCCAAGGAAAGGGCGTGAATCCCGATAAA
CACCCCCAGACTATGGCCTCAGAATGCTTTGAGACCACGACAGGATCTTTCTCAGCCAATACTCTGGGACAAATG
GAGACGGACTTGCGCAAACGCCTCGCCGCTCTATCGTCAGAGATCATCAGCGTCCTACGATATAGTTAG
Transcript >Hirsu2|2828
ATGTCCCACGGCGCCGCCCTCATGGCCCGCATCGACACACGCGAGACGTCGAGTCGCGTCCCCTTCCGAATCGAA
CGTGTCATGCAGGACTCGCACCCCAGCGCCCGGGTCCAAAAGAGCCGAGAATCGGGTTCCACGACGTCCAAGATT
CGCGACAGCTGCCACGCCTGTGCCCTGTCCAAGGTGCGATGTCCGAAAGAGAAGCCAATATGCTCGCGGTGCGAG
AAACGCAGCACTGCCTGCGAGTATTTCGTTACGAAGCGTCCCGGGAGGAAGCGACACAACAGCCAGGTCGCATAT
AATAATAATACCATCAGCGTCGGCGGTTCAGCTCTCGCAGAGGAAGACGTCACAGACCGACAATCCCCGAGCAGT
CGATCCTCAATTCCTCCAGCGCTGACCCCATCCTCGCCGGCCGGCCATCGGTCTGGCGCCGGCGAGGTCTCCTGT
TACACTGATATCTTCGCCGACCTCTTGACGCCCCTGGATCCCCCGCTGACCCCCGGGATGTCTGGCGCGAGAACT
CATTTCCATGACCTCCTCACGCCGTCGATGAACTTCTTAGACCTGGAGTCGCTAGACCCCAACTTGTCAAATTAC
GTCCACGGACATCATGATATCGCCGAGCTGCTCACCTCGGAAGACACGGATCCCGAACCCTCGTCTGTCTCGTCC
TCGCTGGCCTGCACAATCCCATCCAAGCCCTGCTCGCCAGTCTCGGACAGACCGGCGCTCTCATTTCGCAGGGAG
ATTGTCGCGGCGCAGTCAGGATCCATGGGCTGCTGCATGGGGCAAGCCCTGGACCTCATGAACAGCCTCTTCTCT
TCCGAGGACACCTCTTCATCATCCTTCTTGCAAGGTGCCAGCACGGCATCGAACATCGCCGCGCATAACGGCAAT
TCCTCGATTGAGAAAGTAGTTGCTCAGAACAAGCAATCCATAGCAGTCGCGAACAAGATGTTGCAATGCCCGTGT
CAAAAAACCGGCTACTTGACCGCCACGCTATCCATGATCGTGTTCAAGATTCTGGAGCGATACGCCGCAGCGGCA
CGATATAACCCGGATGCAGCAGGCTTCGAAAAAGGCGAGAGTAGGCTCAGTGGCAGTCGGAGGCCGGGACTCGCA
AAAGGTGGTTATCCCGGCTCGCCCAACGACGGTGGCGCCAAGCGAATGACAGCGCAGCTGATCCTCAGTGAGCTG
CATCGAGTGCAAGGACTTGTAAATAAGCTTGCGCCGCGACTCAATGCCCAAGGAAAGGGCGTGAATCCCGATAAA
CACCCCCAGACTATGGCCTCAGAATGCTTTGAGACCACGACAGGATCTTTCTCAGCCAATACTCTGGGACAAATG
GAGACGGACTTGCGCAAACGCCTCGCCGCTCTATCGTCAGAGATCATCAGCGTCCTACGATATAGTTAG
Gene >Hirsu2|2828
ATGTCCCACGGCGCCGCCCTCATGGCCCGCATCGACACACGCGAGACGTCGAGTCGCGTCCCCTTCCGAATCGAA
CGTGTCATGCAGGACTCGCACCCCAGCGCCCGGGTCCAAAAGAGCCGAGAATCGGGTTCCACGACGTCCAAGATT
CGCGACAGCTGCCACGCCTGTGCCCTGTCCAAGGTGCGATGTCCGAAAGAGAAGCCAATATGCTCGCGGTGCGAG
AAACGCAGCACTGCCTGCGAGTATTTCGTTACGAAGCGTCCCGGGAGGAAGCGACACAACAGCCAGGTCGCATAT
AATAATAATACCATCAGCGTCGGCGGTTCAGCTCTCGCAGAGGAAGACGTCACAGACCGACAATCCCCGAGCAGT
CGATCCTCAATTCCTCCAGCGCTGACCCCATCCTCGCCGGCCGGCCATCGGTCTGGCGCCGGCGAGGTCTCCTGT
TACACTGATATCTTCGCCGACCTCTTGACGCCCCTGGATCCCCCGCTGACCCCCGGGATGTCTGGCGCGAGAACT
CATTTCCATGACCTCCTCACGCCGTCGATGAACTTCTTAGACCTGGAGTCGCTAGACCCCAACTTGTCAAATTAC
GTCCACGGACATCATGATATCGCCGAGCTGCTCACCTCGGAAGACACGGATCCCGAACCCTCGTCTGTCTCGTCC
TCGCTGGCCTGCACAATCCCATCCAAGCCCTGCTCGCCAGTCTCGGACAGACCGGCGCTCTCATTTCGCAGGGAG
ATTGTCGCGGCGCAGTCAGGATCCATGGGCTGCTGCATGGGGCAAGCCCTGGACCTCATGAACAGCCTCTTCTCT
TCCGAGGACACCTCTTCATCATCCTTCTTGCAAGGTGCCAGCACGGCATCGAACATCGCCGCGCATAACGGCAAT
TCCTCGATTGAGAAAGTAGTTGCTCAGAACAAGCAATCCATAGCAGTCGCGAACAAGATGTTGCAATGCCCGTGT
CAAAAAACCGGCTACTTGACCGCCACGCTATCCATGATCGTGTTCAAGATTCTGGAGCGATACGCCGCAGCGGCA
CGATATAACCCGGATGCAGCAGGCTTCGAAAAAGGCGAGAGTAGGCTCAGTGGCAGTCGGAGGCCGGGACTCGCA
AAAGGTGGTTATCCCGGCTCGCCCAACGACGGTGGCGCCAAGCGAATGACAGCGCAGCTGATCCTCAGTGAGCTG
CATCGAGTGCAAGGACTTGTAAATAAGCTTGCGCCGCGACTCAATGCCCAAGGAAAGGGCGTGAATCCCGATAAA
CACCCCCAGACTATGGCCTCAGAATGCTTTGAGACCACGACAGGATCTTTCTCAGCCAATACTCTGGGACAAATG
GAGACGGACTTGCGCAAACGCCTCGCCGCTCTATCGTCAGAGATCATCAGCGTCCTACGATATAGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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