Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2822
Gene name
LocationContig_17:40806..41457
Strand-
Gene length (bp)651
Transcript length (bp)651
Coding sequence length (bp)651
Protein length (aa) 217

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00144 Beta-lactamase Beta-lactamase 1.2E-24 4 187

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P15555|DAC_STRSR D-alanyl-D-alanine carboxypeptidase OS=Streptomyces sp. (strain R61) PE=1 SV=2 5 107 4.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2822
MSAEPRAKFQYNNIMYASMGYLIEHLTNTTLADFFRDRLWHPMGMKNTYLHPDDALAKDEDLAHAYYWNNDTEAY
GEIPWSDERNIAGAGMAISSVRDMSRYLRHMLDETGPISKAGHKAIKRPRVVYDNGDHIFDHPVSYGLGWSHTVV
ENEDTWFHTGRVNDMISVMLIVPSRDFGFVFMMNKASVVALESIMSKVFSYLFKTDPGKHRKIEEM*
Coding >Hirsu2|2822
ATGTCTGCGGAGCCGCGGGCCAAGTTCCAGTATAACAACATCATGTACGCTTCTATGGGCTACCTTATCGAGCAT
CTGACAAACACTACGCTCGCCGATTTCTTCCGTGACAGGCTCTGGCATCCAATGGGTATGAAAAACACATACTTG
CACCCAGACGACGCTCTGGCCAAGGATGAAGACCTCGCGCATGCGTACTATTGGAACAACGACACCGAGGCCTAC
GGGGAAATCCCATGGAGCGACGAGAGAAATATCGCTGGCGCCGGAATGGCAATTTCGTCCGTCCGAGACATGTCG
CGTTATCTGCGCCACATGTTGGATGAGACCGGGCCCATTTCTAAAGCAGGCCACAAAGCTATCAAAAGGCCACGC
GTTGTCTATGATAACGGAGATCACATCTTTGACCATCCGGTGAGCTACGGCCTTGGTTGGTCCCATACGGTAGTC
GAGAACGAGGACACTTGGTTCCACACGGGGCGGGTCAACGACATGATTTCCGTGATGCTCATCGTCCCAAGCCGT
GACTTTGGCTTCGTCTTCATGATGAACAAGGCGAGCGTCGTAGCACTGGAGTCTATCATGTCTAAGGTCTTTTCC
TACCTTTTCAAGACAGATCCCGGCAAGCATCGCAAGATCGAGGAAATGTAA
Transcript >Hirsu2|2822
ATGTCTGCGGAGCCGCGGGCCAAGTTCCAGTATAACAACATCATGTACGCTTCTATGGGCTACCTTATCGAGCAT
CTGACAAACACTACGCTCGCCGATTTCTTCCGTGACAGGCTCTGGCATCCAATGGGTATGAAAAACACATACTTG
CACCCAGACGACGCTCTGGCCAAGGATGAAGACCTCGCGCATGCGTACTATTGGAACAACGACACCGAGGCCTAC
GGGGAAATCCCATGGAGCGACGAGAGAAATATCGCTGGCGCCGGAATGGCAATTTCGTCCGTCCGAGACATGTCG
CGTTATCTGCGCCACATGTTGGATGAGACCGGGCCCATTTCTAAAGCAGGCCACAAAGCTATCAAAAGGCCACGC
GTTGTCTATGATAACGGAGATCACATCTTTGACCATCCGGTGAGCTACGGCCTTGGTTGGTCCCATACGGTAGTC
GAGAACGAGGACACTTGGTTCCACACGGGGCGGGTCAACGACATGATTTCCGTGATGCTCATCGTCCCAAGCCGT
GACTTTGGCTTCGTCTTCATGATGAACAAGGCGAGCGTCGTAGCACTGGAGTCTATCATGTCTAAGGTCTTTTCC
TACCTTTTCAAGACAGATCCCGGCAAGCATCGCAAGATCGAGGAAATGTAA
Gene >Hirsu2|2822
ATGTCTGCGGAGCCGCGGGCCAAGTTCCAGTATAACAACATCATGTACGCTTCTATGGGCTACCTTATCGAGCAT
CTGACAAACACTACGCTCGCCGATTTCTTCCGTGACAGGCTCTGGCATCCAATGGGTATGAAAAACACATACTTG
CACCCAGACGACGCTCTGGCCAAGGATGAAGACCTCGCGCATGCGTACTATTGGAACAACGACACCGAGGCCTAC
GGGGAAATCCCATGGAGCGACGAGAGAAATATCGCTGGCGCCGGAATGGCAATTTCGTCCGTCCGAGACATGTCG
CGTTATCTGCGCCACATGTTGGATGAGACCGGGCCCATTTCTAAAGCAGGCCACAAAGCTATCAAAAGGCCACGC
GTTGTCTATGATAACGGAGATCACATCTTTGACCATCCGGTGAGCTACGGCCTTGGTTGGTCCCATACGGTAGTC
GAGAACGAGGACACTTGGTTCCACACGGGGCGGGTCAACGACATGATTTCCGTGATGCTCATCGTCCCAAGCCGT
GACTTTGGCTTCGTCTTCATGATGAACAAGGCGAGCGTCGTAGCACTGGAGTCTATCATGTCTAAGGTCTTTTCC
TACCTTTTCAAGACAGATCCCGGCAAGCATCGCAAGATCGAGGAAATGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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