Protein ID | Hirsu2|2816 |
Gene name | |
Location | Contig_17:8287..10351 |
Strand | - |
Gene length (bp) | 2064 |
Transcript length (bp) | 2013 |
Coding sequence length (bp) | 2013 |
Protein length (aa) | 671 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 39 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 45 | 67 | 22 |
2 | 80 | 102 | 22 |
3 | 570 | 592 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2816 MEAHEQQQSLVRPSQIASIAENGSEQGKNPRSLKESAPSLFWRVILPAHLLLVPVAYIALISIVLSLNDREQSSF GDNVLQVLQIASTLWPLSFAAVMGPFLKILALYRAERGSTLGSLEFLLTSQTTMAALKNFVTIRNVQTWTVGIVL AWGLSPLGGQAAVRSLSLRQRSISLKTPAIYYLGSNVSDMNVLYSGTSDDIAFNGASSRASLISDMRSAISASFF SPDILASHSNGSSKNFAAAVLTLGGPKNAASLGYRDQWRNVRIPFLELLPSYNTHEPNDWVAVPSDMVVPYASLI GLPIRGGSLSPDRAGNSTLVVQSHYQTLSCGQEYDGTEWIKIGSTKLYPPIHHPKFEPIDGVIANTLVNLFNDTE TLAQHLHFFEYPVTEPSSKLELTIGGYCENGFMMRRCKISTSFIDVQISCTRLISFGDLNCRAERVRHTPNFPIA GNMTALSNLRTAQGIIKEMPIATARHHIQVASSLESYLRDPPMVFDPPRSQHAGCFSDVPSEIFQARLATTLNTV IMAMYNLPVLTGADGISLENRTNAWKNTTADWSEFTANVYGINQAWFFVWSASTLVLLTCAAASIVVRCRIRAPD FLESVVGLTRDSPFINIPHEGSGMSACDTLRAVKDVKIKICDVKPDEDVGRIALTTEMNNSKLGWNRMYS* |
Coding | >Hirsu2|2816 ATGGAAGCCCATGAGCAACAGCAAAGTCTCGTCAGGCCTTCACAAATAGCAAGCATTGCCGAAAATGGTTCGGAA CAAGGAAAGAATCCCCGCTCGCTCAAGGAATCCGCCCCTTCGTTGTTTTGGCGAGTGATCCTCCCCGCACACCTG CTCCTGGTCCCTGTGGCCTACATCGCCCTGATCTCGATCGTTCTTTCCTTGAATGATCGTGAGCAAAGCTCTTTC GGCGACAATGTCTTGCAAGTCCTGCAAATCGCCTCCACGTTGTGGCCTTTATCCTTCGCAGCCGTCATGGGACCA TTCCTCAAGATTCTTGCTCTCTATCGCGCCGAACGAGGCTCTACTCTCGGCTCTCTTGAGTTCCTCCTGACAAGT CAAACCACTATGGCAGCTCTCAAGAACTTTGTCACTATAAGGAACGTCCAGACGTGGACTGTTGGCATTGTGCTG GCCTGGGGTCTCAGCCCTTTAGGAGGCCAAGCAGCCGTGAGGTCTTTATCCCTTCGACAAAGATCCATCAGTCTG AAAACACCTGCGATTTATTACCTGGGGAGCAATGTCTCCGATATGAATGTTCTTTACAGCGGTACTTCTGATGAT ATTGCCTTCAACGGAGCATCGTCCCGGGCCTCTCTTATCTCGGATATGAGAAGTGCGATTTCGGCATCGTTCTTC TCACCTGACATCCTTGCTTCACACTCTAATGGTTCGAGCAAAAATTTCGCCGCTGCTGTCCTGACACTAGGGGGA CCCAAGAATGCCGCCAGTCTTGGATACCGAGACCAATGGCGGAATGTGCGTATTCCCTTCCTGGAGTTGCTTCCG TCCTACAATACCCACGAGCCCAACGATTGGGTGGCGGTGCCTTCCGACATGGTGGTACCATATGCTTCGCTAATT GGGTTACCCATTCGAGGTGGTTCGCTCAGCCCGGATCGAGCTGGCAACTCTACGCTGGTTGTACAATCTCACTAC CAGACGCTCTCTTGTGGACAGGAGTATGACGGAACGGAATGGATAAAGATTGGCTCCACAAAACTCTACCCTCCG ATACACCACCCCAAGTTCGAACCAATAGACGGAGTCATCGCGAACACATTAGTAAACCTTTTCAATGATACGGAA ACTCTCGCTCAACATCTTCATTTTTTCGAATACCCAGTGACCGAGCCGTCATCGAAATTGGAGCTAACTATCGGG GGTTATTGCGAAAATGGCTTCATGATGCGCAGATGCAAAATCAGCACGTCATTCATTGATGTTCAAATATCATGC ACCAGACTAATCTCTTTCGGCGATCTCAATTGCCGGGCCGAACGAGTCCGCCACACTCCAAACTTTCCAATTGCG GGAAACATGACTGCACTTTCGAATCTTCGGACGGCGCAAGGTATCATCAAGGAAATGCCAATCGCCACGGCAAGG CACCACATACAGGTCGCCAGCAGTCTAGAGTCGTACCTCAGGGATCCTCCCATGGTATTTGACCCCCCAAGAAGC CAGCATGCGGGGTGCTTCTCAGACGTACCGAGCGAGATCTTCCAGGCTAGGCTTGCTACCACGTTGAATACCGTC ATTATGGCAATGTACAACTTGCCTGTCTTGACAGGCGCAGATGGCATCAGCCTCGAAAATCGCACCAACGCGTGG AAGAACACCACTGCAGACTGGAGCGAGTTTACGGCAAACGTCTACGGCATAAATCAAGCATGGTTCTTCGTTTGG TCAGCATCAACACTGGTGCTGCTTACTTGTGCGGCTGCGAGTATCGTCGTTCGGTGCCGCATCAGAGCTCCTGAC TTCTTGGAAAGCGTGGTTGGGCTCACCAGAGACTCCCCGTTCATCAATATTCCGCATGAGGGGAGTGGCATGAGC GCCTGTGATACGCTGCGAGCGGTTAAAGACGTAAAGATTAAAATTTGTGATGTAAAGCCAGATGAAGACGTTGGG AGGATTGCTCTGACAACTGAGATGAATAATTCCAAGCTGGGTTGGAACAGGATGTACTCCTGA |
Transcript | >Hirsu2|2816 ATGGAAGCCCATGAGCAACAGCAAAGTCTCGTCAGGCCTTCACAAATAGCAAGCATTGCCGAAAATGGTTCGGAA CAAGGAAAGAATCCCCGCTCGCTCAAGGAATCCGCCCCTTCGTTGTTTTGGCGAGTGATCCTCCCCGCACACCTG CTCCTGGTCCCTGTGGCCTACATCGCCCTGATCTCGATCGTTCTTTCCTTGAATGATCGTGAGCAAAGCTCTTTC GGCGACAATGTCTTGCAAGTCCTGCAAATCGCCTCCACGTTGTGGCCTTTATCCTTCGCAGCCGTCATGGGACCA TTCCTCAAGATTCTTGCTCTCTATCGCGCCGAACGAGGCTCTACTCTCGGCTCTCTTGAGTTCCTCCTGACAAGT CAAACCACTATGGCAGCTCTCAAGAACTTTGTCACTATAAGGAACGTCCAGACGTGGACTGTTGGCATTGTGCTG GCCTGGGGTCTCAGCCCTTTAGGAGGCCAAGCAGCCGTGAGGTCTTTATCCCTTCGACAAAGATCCATCAGTCTG AAAACACCTGCGATTTATTACCTGGGGAGCAATGTCTCCGATATGAATGTTCTTTACAGCGGTACTTCTGATGAT ATTGCCTTCAACGGAGCATCGTCCCGGGCCTCTCTTATCTCGGATATGAGAAGTGCGATTTCGGCATCGTTCTTC TCACCTGACATCCTTGCTTCACACTCTAATGGTTCGAGCAAAAATTTCGCCGCTGCTGTCCTGACACTAGGGGGA CCCAAGAATGCCGCCAGTCTTGGATACCGAGACCAATGGCGGAATGTGCGTATTCCCTTCCTGGAGTTGCTTCCG TCCTACAATACCCACGAGCCCAACGATTGGGTGGCGGTGCCTTCCGACATGGTGGTACCATATGCTTCGCTAATT GGGTTACCCATTCGAGGTGGTTCGCTCAGCCCGGATCGAGCTGGCAACTCTACGCTGGTTGTACAATCTCACTAC CAGACGCTCTCTTGTGGACAGGAGTATGACGGAACGGAATGGATAAAGATTGGCTCCACAAAACTCTACCCTCCG ATACACCACCCCAAGTTCGAACCAATAGACGGAGTCATCGCGAACACATTAGTAAACCTTTTCAATGATACGGAA ACTCTCGCTCAACATCTTCATTTTTTCGAATACCCAGTGACCGAGCCGTCATCGAAATTGGAGCTAACTATCGGG GGTTATTGCGAAAATGGCTTCATGATGCGCAGATGCAAAATCAGCACGTCATTCATTGATGTTCAAATATCATGC ACCAGACTAATCTCTTTCGGCGATCTCAATTGCCGGGCCGAACGAGTCCGCCACACTCCAAACTTTCCAATTGCG GGAAACATGACTGCACTTTCGAATCTTCGGACGGCGCAAGGTATCATCAAGGAAATGCCAATCGCCACGGCAAGG CACCACATACAGGTCGCCAGCAGTCTAGAGTCGTACCTCAGGGATCCTCCCATGGTATTTGACCCCCCAAGAAGC CAGCATGCGGGGTGCTTCTCAGACGTACCGAGCGAGATCTTCCAGGCTAGGCTTGCTACCACGTTGAATACCGTC ATTATGGCAATGTACAACTTGCCTGTCTTGACAGGCGCAGATGGCATCAGCCTCGAAAATCGCACCAACGCGTGG AAGAACACCACTGCAGACTGGAGCGAGTTTACGGCAAACGTCTACGGCATAAATCAAGCATGGTTCTTCGTTTGG TCAGCATCAACACTGGTGCTGCTTACTTGTGCGGCTGCGAGTATCGTCGTTCGGTGCCGCATCAGAGCTCCTGAC TTCTTGGAAAGCGTGGTTGGGCTCACCAGAGACTCCCCGTTCATCAATATTCCGCATGAGGGGAGTGGCATGAGC GCCTGTGATACGCTGCGAGCGGTTAAAGACGTAAAGATTAAAATTTGTGATGTAAAGCCAGATGAAGACGTTGGG AGGATTGCTCTGACAACTGAGATGAATAATTCCAAGCTGGGTTGGAACAGGATGTACTCCTGA |
Gene | >Hirsu2|2816 ATGGAAGCCCATGAGCAACAGCAAAGTCTCGTCAGGCCTTCACAAATAGCAAGCATTGCCGAAAATGGTTCGGAA CAAGGAAAGAATCCCCGCTCGCTCAAGGAATCCGCCCCTTCGTTGTTTTGGCGAGTGATCCTCCCCGCACACCTG CTCCTGGTCCCTGTGGCCTACATCGGTAAGTTCAATGCTCGCCAATATTCATACAGCATGTCTCACACTTGAACA GCCCTGATCTCGATCGTTCTTTCCTTGAATGATCGTGAGCAAAGCTCTTTCGGCGACAATGTCTTGCAAGTCCTG CAAATCGCCTCCACGTTGTGGCCTTTATCCTTCGCAGCCGTCATGGGACCATTCCTCAAGATTCTTGCTCTCTAT CGCGCCGAACGAGGCTCTACTCTCGGCTCTCTTGAGTTCCTCCTGACAAGTCAAACCACTATGGCAGCTCTCAAG AACTTTGTCACTATAAGGAACGTCCAGACGTGGACTGTTGGCATTGTGCTGGCCTGGGGTCTCAGCCCTTTAGGA GGCCAAGCAGCCGTGAGGTCTTTATCCCTTCGACAAAGATCCATCAGTCTGAAAACACCTGCGATTTATTACCTG GGGAGCAATGTCTCCGATATGAATGTTCTTTACAGCGGTACTTCTGATGATATTGCCTTCAACGGAGCATCGTCC CGGGCCTCTCTTATCTCGGATATGAGAAGTGCGATTTCGGCATCGTTCTTCTCACCTGACATCCTTGCTTCACAC TCTAATGGTTCGAGCAAAAATTTCGCCGCTGCTGTCCTGACACTAGGGGGACCCAAGAATGCCGCCAGTCTTGGA TACCGAGACCAATGGCGGAATGTGCGTATTCCCTTCCTGGAGTTGCTTCCGTCCTACAATACCCACGAGCCCAAC GATTGGGTGGCGGTGCCTTCCGACATGGTGGTACCATATGCTTCGCTAATTGGGTTACCCATTCGAGGTGGTTCG CTCAGCCCGGATCGAGCTGGCAACTCTACGCTGGTTGTACAATCTCACTACCAGACGCTCTCTTGTGGACAGGAG TATGACGGAACGGAATGGATAAAGATTGGCTCCACAAAACTCTACCCTCCGATACACCACCCCAAGTTCGAACCA ATAGACGGAGTCATCGCGAACACATTAGTAAACCTTTTCAATGATACGGAAACTCTCGCTCAACATCTTCATTTT TTCGAATACCCAGTGACCGAGCCGTCATCGAAATTGGAGCTAACTATCGGGGGTTATTGCGAAAATGGCTTCATG ATGCGCAGATGCAAAATCAGCACGTCATTCATTGATGTTCAAATATCATGCACCAGACTAATCTCTTTCGGCGAT CTCAATTGCCGGGCCGAACGAGTCCGCCACACTCCAAACTTTCCAATTGCGGGAAACATGACTGCACTTTCGAAT CTTCGGACGGCGCAAGGTATCATCAAGGAAATGCCAATCGCCACGGCAAGGCACCACATACAGGTCGCCAGCAGT CTAGAGTCGTACCTCAGGGATCCTCCCATGGTATTTGACCCCCCAAGAAGCCAGCATGCGGGGTGCTTCTCAGAC GTACCGAGCGAGATCTTCCAGGCTAGGCTTGCTACCACGTTGAATACCGTCATTATGGCAATGTACAACTTGCCT GTCTTGACAGGCGCAGATGGCATCAGCCTCGAAAATCGCACCAACGCGTGGAAGAACACCACTGCAGACTGGAGC GAGTTTACGGCAAACGTCTACGGCATAAATCAAGCATGGTTCTTCGTTTGGTCAGCATCAACACTGGTGCTGCTT ACTTGTGCGGCTGCGAGTATCGTCGTTCGGTGCCGCATCAGAGCTCCTGACTTCTTGGAAAGCGTGGTTGGGCTC ACCAGAGACTCCCCGTTCATCAATATTCCGCATGAGGGGAGTGGCATGAGCGCCTGTGATACGCTGCGAGCGGTT AAAGACGTAAAGATTAAAATTTGTGATGTAAAGCCAGATGAAGACGTTGGGAGGATTGCTCTGACAACTGAGATG AATAATTCCAAGCTGGGTTGGAACAGGATGTACTCCTGA |