Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|279
Gene name
LocationContig_1051:1060..1643
Strand-
Gene length (bp)583
Transcript length (bp)495
Coding sequence length (bp)495
Protein length (aa) 165

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6303 0.4164 0.4684 0.085 0.1553 0.0913 0.1127 0.1399 0.1673 0.0245

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6075
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5609
Ophiocordyceps australis map64 (Brazil) OphauB2|3258
Ophiocordyceps camponoti-floridani Ophcf2|06660
Ophiocordyceps kimflemingae Ophio5|5308
Ophiocordyceps subramaniannii Hirsu2|279 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|279
MASDEDYMAFLDKANKDAGEGDARAQQQQKPGRAVFKAVDDEGAVPQVLRDVAAKSVYTSEADEPFEAVSLKWDG
DEDGLPDEVEFAKLIRHWDADKAEVEIMDPLEWDARGQYTDVIQAVRQAGRGSDVRVYRVARDETRAEYWLVTRD
RGRIVGVKALGVES*
Coding >Hirsu2|279
ATGGCGAGCGACGAGGACTACATGGCCTTCCTGGACAAGGCGAACAAGGACGCGGGCGAGGGAGATGCGCGCGCG
CAGCAGCAGCAGAAGCCGGGACGGGCCGTCTTCAAGGCGGTGGACGACGAGGGCGCGGTGCCCCAGGTGCTCCGG
GACGTCGCCGCCAAGAGCGTGTACACGAGCGAGGCGGACGAGCCGTTCGAGGCGGTGTCGCTGAAGTGGGACGGG
GACGAGGACGGGCTGCCGGATGAAGTCGAGTTCGCCAAGCTCATCCGCCACTGGGACGCGGACAAGGCCGAGGTC
GAGATCATGGACCCGCTTGAATGGGACGCGCGCGGGCAGTACACGGACGTGATCCAGGCGGTGCGGCAGGCCGGC
CGCGGCAGCGACGTGAGGGTGTACCGCGTCGCGCGGGACGAGACGCGCGCCGAGTACTGGCTCGTCACGCGCGAC
CGCGGCAGGATCGTCGGGGTCAAGGCCCTGGGCGTCGAGAGCTAG
Transcript >Hirsu2|279
ATGGCGAGCGACGAGGACTACATGGCCTTCCTGGACAAGGCGAACAAGGACGCGGGCGAGGGAGATGCGCGCGCG
CAGCAGCAGCAGAAGCCGGGACGGGCCGTCTTCAAGGCGGTGGACGACGAGGGCGCGGTGCCCCAGGTGCTCCGG
GACGTCGCCGCCAAGAGCGTGTACACGAGCGAGGCGGACGAGCCGTTCGAGGCGGTGTCGCTGAAGTGGGACGGG
GACGAGGACGGGCTGCCGGATGAAGTCGAGTTCGCCAAGCTCATCCGCCACTGGGACGCGGACAAGGCCGAGGTC
GAGATCATGGACCCGCTTGAATGGGACGCGCGCGGGCAGTACACGGACGTGATCCAGGCGGTGCGGCAGGCCGGC
CGCGGCAGCGACGTGAGGGTGTACCGCGTCGCGCGGGACGAGACGCGCGCCGAGTACTGGCTCGTCACGCGCGAC
CGCGGCAGGATCGTCGGGGTCAAGGCCCTGGGCGTCGAGAGCTAG
Gene >Hirsu2|279
ATGGCGAGCGACGAGGACTACATGGCCTTCCTGGACAAGGCGAACAAGGACGCGGGCGAGGGAGATGCGCGCGCG
CAGCAGCAGCAGAAGCCGGGACGGGCCGTCTTCAAGGCGGTGGACGACGAGGGCGCGGTGCCCCAGGTGCTCCGG
GACGTCGCCGCCAAGAGCGTGTACACGAGCGAGGCGGACGAGCCGTTCGAGGCGGTGTCGCTGAAGTGGGACGGG
GACGAGGACGGGCTGCCGGATGAAGGTCCGCCAACCCCCAGCACGGAGCAGCGTGCCCCCCCAAAGAGAAACGGA
TACGGAGGTTGCTGACGCGCAGACGGGACGATGCACAGTCGAGTTCGCCAAGCTCATCCGCCACTGGGACGCGGA
CAAGGCCGAGGTCGAGATCATGGACCCGCTTGAATGGGACGCGCGCGGGCAGTACACGGACGTGATCCAGGCGGT
GCGGCAGGCCGGCCGCGGCAGCGACGTGAGGGTGTACCGCGTCGCGCGGGACGAGACGCGCGCCGAGTACTGGCT
CGTCACGCGCGACCGCGGCAGGATCGTCGGGGTCAAGGCCCTGGGCGTCGAGAGCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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