© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2787 |
| Gene name | |
| Location | Contig_169:13774..15577 |
| Strand | - |
| Gene length (bp) | 1803 |
| Transcript length (bp) | 1224 |
| Coding sequence length (bp) | 1224 |
| Protein length (aa) | 408 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 4.8E-16 | 70 | 227 |
| PF01728 | FtsJ | FtsJ-like methyltransferase | 4.2E-05 | 71 | 134 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0032259 | methylation | Yes |
| GO:0016740 | transferase activity | No |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.7016 | 0.4321 | 0.2068 | 0.1053 | 0.2568 | 0.2113 | 0.2273 | 0.1849 | 0.3411 | 0.2008 |
| Orthofinder run ID | 4 |
| Orthogroup | 5061 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2787 MSQNVVSGQLPQPPQSMQGFWAHGRFYGGWRPRKYLFPIDAEELNRLDIFHKFFLVARKDAVCSHSLNLGRTARV LDLGTGTGIWAINVAEESEHVPEIMAVDINRIQPALIPRGMMTMQFDIEEPSWDSLMWNCDLIHLRMLFGSIQTD LWPDTYRKIFEHLAPGTGTVEHVEIDWVPRWEHSGEFPENSAFKEWSDAFLKALDLFNRSARVSTHHTRHMIEQA GFCDFQEQTIRCYVNPWSANSWEQETARWFNLGLKHCLEAMSLMPMIERLRMTAEQVNDLCARVKEENTKLRYHG YCTIHIWTARKPAHPAPRGPPKPDVSRLEGKVPCFDYLDGVESTRRSATKANSKDIYLDQGLVDFSRLWKRRRAA SSSSDARVTWWKVGSSPRRFAGFGETGLIPSL* |
| Coding | >Hirsu2|2787 ATGTCACAAAACGTGGTGTCTGGCCAGCTTCCACAGCCGCCGCAATCGATGCAAGGATTCTGGGCACACGGCAGG TTTTACGGCGGCTGGAGACCGAGAAAGTACCTGTTCCCAATCGATGCTGAAGAGCTCAACAGACTCGACATATTC CACAAGTTCTTTCTTGTCGCCCGCAAGGATGCAGTCTGCTCCCACAGCTTGAACCTGGGCCGGACTGCCAGAGTC TTGGACCTGGGAACCGGCACCGGCATCTGGGCCATCAATGTGGCCGAAGAATCGGAACACGTCCCCGAGATCATG GCTGTGGACATCAACCGGATTCAACCAGCTCTAATACCACGCGGCATGATGACGATGCAGTTCGACATCGAGGAG CCGTCTTGGGATTCCTTGATGTGGAATTGTGATCTGATCCACCTCCGGATGCTCTTTGGCAGCATCCAGACGGAC CTGTGGCCGGACACGTACCGCAAGATTTTCGAACACTTGGCCCCGGGGACGGGCACCGTGGAGCATGTTGAGATC GACTGGGTCCCCCGCTGGGAGCACAGCGGCGAGTTCCCCGAGAACTCGGCCTTTAAGGAGTGGTCGGACGCCTTT CTCAAAGCCCTAGACCTCTTCAACCGCAGCGCCCGCGTGTCGACGCATCATACCAGGCACATGATCGAACAGGCC GGTTTTTGCGACTTTCAAGAGCAGACAATCCGCTGTTATGTCAACCCTTGGTCGGCCAATTCATGGGAACAGGAG ACGGCAAGGTGGTTCAATCTGGGCCTTAAGCATTGCCTGGAAGCGATGAGCCTCATGCCCATGATCGAGCGGCTG CGCATGACGGCGGAACAGGTCAACGACCTCTGCGCACGCGTCAAGGAGGAGAATACGAAATTACGGTATCACGGC TACTGCACGATACACATCTGGACAGCCAGGAAGCCTGCTCATCCTGCTCCAAGGGGGCCACCTAAGCCAGATGTG AGCCGTCTGGAAGGCAAGGTTCCATGTTTTGATTACCTCGATGGCGTAGAGTCCACGCGCCGCTCTGCGACTAAA GCCAACTCGAAAGACATTTATTTGGACCAAGGGCTCGTCGACTTCAGCAGACTCTGGAAGCGCCGAAGAGCAGCC TCGAGCAGCTCCGATGCCCGCGTTACGTGGTGGAAAGTCGGGTCCAGCCCCCGTCGCTTTGCGGGCTTCGGCGAG ACCGGGCTCATCCCGAGTTTGTAG |
| Transcript | >Hirsu2|2787 ATGTCACAAAACGTGGTGTCTGGCCAGCTTCCACAGCCGCCGCAATCGATGCAAGGATTCTGGGCACACGGCAGG TTTTACGGCGGCTGGAGACCGAGAAAGTACCTGTTCCCAATCGATGCTGAAGAGCTCAACAGACTCGACATATTC CACAAGTTCTTTCTTGTCGCCCGCAAGGATGCAGTCTGCTCCCACAGCTTGAACCTGGGCCGGACTGCCAGAGTC TTGGACCTGGGAACCGGCACCGGCATCTGGGCCATCAATGTGGCCGAAGAATCGGAACACGTCCCCGAGATCATG GCTGTGGACATCAACCGGATTCAACCAGCTCTAATACCACGCGGCATGATGACGATGCAGTTCGACATCGAGGAG CCGTCTTGGGATTCCTTGATGTGGAATTGTGATCTGATCCACCTCCGGATGCTCTTTGGCAGCATCCAGACGGAC CTGTGGCCGGACACGTACCGCAAGATTTTCGAACACTTGGCCCCGGGGACGGGCACCGTGGAGCATGTTGAGATC GACTGGGTCCCCCGCTGGGAGCACAGCGGCGAGTTCCCCGAGAACTCGGCCTTTAAGGAGTGGTCGGACGCCTTT CTCAAAGCCCTAGACCTCTTCAACCGCAGCGCCCGCGTGTCGACGCATCATACCAGGCACATGATCGAACAGGCC GGTTTTTGCGACTTTCAAGAGCAGACAATCCGCTGTTATGTCAACCCTTGGTCGGCCAATTCATGGGAACAGGAG ACGGCAAGGTGGTTCAATCTGGGCCTTAAGCATTGCCTGGAAGCGATGAGCCTCATGCCCATGATCGAGCGGCTG CGCATGACGGCGGAACAGGTCAACGACCTCTGCGCACGCGTCAAGGAGGAGAATACGAAATTACGGTATCACGGC TACTGCACGATACACATCTGGACAGCCAGGAAGCCTGCTCATCCTGCTCCAAGGGGGCCACCTAAGCCAGATGTG AGCCGTCTGGAAGGCAAGGTTCCATGTTTTGATTACCTCGATGGCGTAGAGTCCACGCGCCGCTCTGCGACTAAA GCCAACTCGAAAGACATTTATTTGGACCAAGGGCTCGTCGACTTCAGCAGACTCTGGAAGCGCCGAAGAGCAGCC TCGAGCAGCTCCGATGCCCGCGTTACGTGGTGGAAAGTCGGGTCCAGCCCCCGTCGCTTTGCGGGCTTCGGCGAG ACCGGGCTCATCCCGAGTTTGTAG |
| Gene | >Hirsu2|2787 ATGTCACAAAACGTGTATGTGCCGGCCCGCTTCTGAGTCGGCAACGGCCTCTGGGCCCTCTCCTCGGACTTTGGA TAGCTGCTGACCCACGAATACAGGGTGTCTGGCCAGCTTCCACAGCCGCCGCAATCGATGCAAGGATTCTGGGCA CACGGCAGGTTTTACGGCGGCTGGAGACCGAGAAAGTACCTGTTCCCAATCGATGCTGTTGGTCCTCCTCCCTTG TCCTCCACGTCGTTCTACTGACGCTCTGTTGATCAGGAAGAGCTCAACAGACTCGACATATTCCACAAGTTCTTT CTTGTCGCCCGCAAGGATGCAGTCTGCTCCCACAGCTTGAACCTGGGCCGGACTGCCAGAGTCTTGGACCTGGGA ACCGGCACCGGCATCTGGGCCATCAATGTGGCCGAAGAGTGAGGACCCTGATGCTCGCGCCCTCTGCTTGCCTGC CGCGCGACGCGCGAAGCTGACTCGAGCCAGATCGGAACACGTCCCCGAGATCATGGCTGTGGACATCAACCGGAT TCAACCAGCTCTGTAAGTGGTCTTGGGCCGGCCAACACGTGCCACCCGCTCACCATCCTCAGAATACCACGCGGC ATGATGACGATGCAGTTCGACATCGAGGAGCCGTCTTGGGATTCCTTGATGTGGAATTGTGATCTGATCCACCTC CGGATGCTCTTTGGCAGCATCCAGACGGACCTGTGGCCGGACACGTACCGCAAGATTTTCGAGTAAGCGCCCTCG CTCAGGACCCTGCCCGAGACGCTCACCACTGACGGCGACCCAGACACTTGGCCCCGGGGACGGGCACCGTGGAGC ATGTTGAGATCGACTGGGTCCCCCGCTGGGAGCACAGCGGCGAGTTCCCCGAGAACTCGGCCTTTAAGGAGTGGT CGGACGCCTTTCTCAAAGCCCTAGACCTCTTCAACCGCAGCGCCCGCGTGTCGACGCATCATACCAGGCACATGA TCGAACAGGCCGGTTTTTGCGACTTTCAAGAGCAGACAATCCGCTGTTATGTCAACCCTTGGTCGGCCAATTCAT GGGAACAGGAGACGGCAAGGTGGTTCAATCTGGGCCTTAAGCATTGCCTGGAAGCGATGAGCCTCATGCCCATGA TCGAGCGGCTGCGCATGACGGCGGAACAGGTCAACGACCTCTGCGCACGCGTCAAGGAGGAGAATACGAAATTAC GGTATCACGGCTACTGCACGATGTAAGTCTCCCAACACCTAGTTTCCTCGTGCCTGCCCCCCTCGGCTCGGCCTC TCTCTCGCCTTGTCCTCTTCTTTTCCTCTTGAGCTGCTCCCCTTGCCCTCTTTCCATACTCGAGGCTCATGACAG CTGATACGCCCGTGATGGCCTCGTACAGACACATCTGGACAGCCAGGAAGCCTGCTCATCCTGCTCCAAGGGGGC CACCTAAGCCAGTGCCCCCAATGCAGGTCAATAGTGTGAGGCACGGACCTCCCGGCAGGATGTGAGCCGTCTGGA AGGTGAGGGGCATCGCATCGCTACGCTGTATCGTGCGGCAACCACTGACGAGCCTTGGCATGTCAAGGCAAGGTT CCATGTTTTGATTACCTCGATGGCGTAGAGTCCACGCGCCGCTCTGCGACTAAAGCCAACTCGAAAGACATTTAT TTGGACCAAGGGCTCGTCGACTTCAGCAGACTCTGGAAGCGCCGAAGAGCAGCCTCGAGCAGCTCCGATGCCCGC GTTACGTGGTGGAAAGTCGGGTCCAGCCCCCGTCGCTTTGCGGGCTTCGGCGAGACCGGGCTCATCCCGAGTTTG TAG |