Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2783
Gene name
LocationContig_169:2557..2931
Strand-
Gene length (bp)374
Transcript length (bp)321
Coding sequence length (bp)321
Protein length (aa) 107

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular 0.0897 0.0793 0.6827 0.5234 0.0496 0.0043 0.1927 0.0892 0.1498 0.0043

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999555

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5060
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2221
Ophiocordyceps australis map64 (Brazil) OphauB2|1147
Ophiocordyceps camponoti-floridani Ophcf2|05729
Ophiocordyceps camponoti-rufipedis Ophun1|1626
Ophiocordyceps kimflemingae Ophio5|8589
Ophiocordyceps subramaniannii Hirsu2|2783 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2783
MRPALLVVAAAGAVAPVVAKPADAIPTTILPPPAVLGSQPVESAQGLPRSSIVSPSTCCTEGHPSLARPNATASR
VAEVTGGAIPQQMQASIVGLLGFCIMGLVML*
Coding >Hirsu2|2783
ATGCGTCCGGCGCTGCTCGTTGTCGCCGCCGCGGGCGCCGTCGCGCCCGTCGTCGCCAAGCCGGCCGACGCCATC
CCGACGACGATACTGCCTCCGCCCGCCGTCCTCGGCTCCCAGCCGGTCGAGTCCGCCCAGGGGCTCCCGCGCTCC
TCCATCGTCTCGCCCTCGACCTGCTGCACTGAGGGCCACCCTTCGCTCGCCCGCCCCAACGCAACGGCGTCGCGC
GTCGCAGAGGTCACCGGCGGCGCCATCCCGCAACAGATGCAGGCCTCCATCGTCGGCCTGCTGGGCTTCTGCATC
ATGGGCTTGGTCATGCTTTAG
Transcript >Hirsu2|2783
ATGCGTCCGGCGCTGCTCGTTGTCGCCGCCGCGGGCGCCGTCGCGCCCGTCGTCGCCAAGCCGGCCGACGCCATC
CCGACGACGATACTGCCTCCGCCCGCCGTCCTCGGCTCCCAGCCGGTCGAGTCCGCCCAGGGGCTCCCGCGCTCC
TCCATCGTCTCGCCCTCGACCTGCTGCACTGAGGGCCACCCTTCGCTCGCCCGCCCCAACGCAACGGCGTCGCGC
GTCGCAGAGGTCACCGGCGGCGCCATCCCGCAACAGATGCAGGCCTCCATCGTCGGCCTGCTGGGCTTCTGCATC
ATGGGCTTGGTCATGCTTTAG
Gene >Hirsu2|2783
ATGCGTCCGGCGCTGCTCGTTGTCGCCGCCGCGGGCGCCGTCGCGCCCGTCGTCGCCAAGCCGGCCGACGCCATC
CCGACGACGATACTGCCTCCGCCCGCCGTCCTCGGCTCCCAGCCGGTCGAGTCCGCCCAGGGGCTCCCGCGCTCC
TCCATCGTCTCGCCCTCGACCTGCTGCACTGAGGGTGAGTCTCTTGCCGGCCCCGTCGCCGCCGCTCGACGCTGA
CGCTGAGCCTAGGCCACCCTTCGCTCGCCCGCCCCAACGCAACGGCGTCGCGCGTCGCAGAGGTCACCGGCGGCG
CCATCCCGCAACAGATGCAGGCCTCCATCGTCGGCCTGCTGGGCTTCTGCATCATGGGCTTGGTCATGCTTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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