Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2773
Gene name
LocationContig_1683:2672..3567
Strand+
Gene length (bp)895
Transcript length (bp)837
Coding sequence length (bp)837
Protein length (aa) 279

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1558 0.085 0.9111 0.0804 0.0828 0.035 0.2332 0.1861 0.1539 0.0805

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5058
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|03768
Ophiocordyceps camponoti-rufipedis Ophun1|4732
Ophiocordyceps subramaniannii Hirsu2|2773 (this protein)
Ophiocordyceps subramaniannii Hirsu2|6412
Ophiocordyceps subramaniannii Hirsu2|7102

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2773
MHFSSLLAVASLGAAEIAFQLGDQATSRQQVLSSARQFSHADDRAALQNVEDDIAVGPLVSTMIHHPLPGQEVDT
GSDFNVEFSIDNLLLSDQTIPYFEPQRVDSLTGEVLGHVQVIIERMEETGTDWSSVGLQVVYFHQVGIDSHAVVD
DLTGRLSVQVQGGLTKPGRHRICTVAMAENQQPVAMPSVESGPMNDCTWFSVESTKETQAMADAEPTNLERHIPS
IARDVPLPSGLRSLSSQRFREHSQQLLGVNATERARGLLYSVLYSSALLSKTG*
Coding >Hirsu2|2773
ATGCATTTCTCATCACTTCTTGCTGTGGCGAGCCTAGGTGCTGCCGAAATTGCTTTCCAGCTTGGAGACCAGGCC
ACGAGCCGCCAACAGGTCCTCTCCTCAGCTCGTCAATTTTCTCATGCCGATGACCGAGCTGCCCTACAAAATGTC
GAAGACGACATCGCAGTAGGCCCTCTGGTATCGACAATGATTCACCACCCGTTGCCGGGGCAAGAAGTCGACACG
GGGTCGGACTTCAATGTCGAATTCTCAATCGACAATCTGCTCCTATCAGATCAGACTATTCCTTACTTCGAGCCA
CAGCGGGTTGACTCCCTGACCGGCGAAGTCCTGGGGCATGTCCAAGTAATCATCGAGAGGATGGAGGAGACAGGC
ACAGACTGGTCTTCCGTCGGATTGCAAGTTGTGTATTTCCACCAAGTCGGCATCGATAGCCACGCAGTTGTCGAC
GACCTCACGGGAAGACTCAGCGTCCAGGTTCAGGGCGGCCTCACCAAGCCAGGGCGCCACCGTATCTGCACCGTG
GCCATGGCAGAGAACCAGCAGCCGGTGGCGATGCCCTCAGTTGAGAGCGGGCCCATGAATGATTGCACATGGTTT
AGCGTCGAGAGCACAAAGGAAACGCAGGCTATGGCGGATGCAGAGCCAACCAATCTCGAGCGGCATATTCCGTCC
ATCGCCCGGGATGTGCCGTTGCCGTCCGGCCTGCGTTCTCTTTCCTCCCAGCGTTTTCGGGAGCATTCACAGCAG
CTTCTGGGGGTCAACGCAACGGAGAGGGCCCGCGGACTCCTGTACAGCGTTTTGTACAGCTCAGCCCTCTTGTCC
AAAACGGGTTAA
Transcript >Hirsu2|2773
ATGCATTTCTCATCACTTCTTGCTGTGGCGAGCCTAGGTGCTGCCGAAATTGCTTTCCAGCTTGGAGACCAGGCC
ACGAGCCGCCAACAGGTCCTCTCCTCAGCTCGTCAATTTTCTCATGCCGATGACCGAGCTGCCCTACAAAATGTC
GAAGACGACATCGCAGTAGGCCCTCTGGTATCGACAATGATTCACCACCCGTTGCCGGGGCAAGAAGTCGACACG
GGGTCGGACTTCAATGTCGAATTCTCAATCGACAATCTGCTCCTATCAGATCAGACTATTCCTTACTTCGAGCCA
CAGCGGGTTGACTCCCTGACCGGCGAAGTCCTGGGGCATGTCCAAGTAATCATCGAGAGGATGGAGGAGACAGGC
ACAGACTGGTCTTCCGTCGGATTGCAAGTTGTGTATTTCCACCAAGTCGGCATCGATAGCCACGCAGTTGTCGAC
GACCTCACGGGAAGACTCAGCGTCCAGGTTCAGGGCGGCCTCACCAAGCCAGGGCGCCACCGTATCTGCACCGTG
GCCATGGCAGAGAACCAGCAGCCGGTGGCGATGCCCTCAGTTGAGAGCGGGCCCATGAATGATTGCACATGGTTT
AGCGTCGAGAGCACAAAGGAAACGCAGGCTATGGCGGATGCAGAGCCAACCAATCTCGAGCGGCATATTCCGTCC
ATCGCCCGGGATGTGCCGTTGCCGTCCGGCCTGCGTTCTCTTTCCTCCCAGCGTTTTCGGGAGCATTCACAGCAG
CTTCTGGGGGTCAACGCAACGGAGAGGGCCCGCGGACTCCTGTACAGCGTTTTGTACAGCTCAGCCCTCTTGTCC
AAAACGGGTTAA
Gene >Hirsu2|2773
ATGCATTTCTCATCACTTCTTGCTGTGGCGAGCCTAGGTGCTGCCGAAATTGCTTTCCAGCTTGGAGACCAGGCC
ACGAGCCGCCAACAGGTCCTCTCCTCAGCTCGTCAGTAAGTCACGCCGAGACTCTGAACATTTGCAAAAAGCCAG
CCCACTAATATCGATTAGATTTTCTCATGCCGATGACCGAGCTGCCCTACAAAATGTCGAAGACGACATCGCAGT
AGGCCCTCTGGTATCGACAATGATTCACCACCCGTTGCCGGGGCAAGAAGTCGACACGGGGTCGGACTTCAATGT
CGAATTCTCAATCGACAATCTGCTCCTATCAGATCAGACTATTCCTTACTTCGAGCCACAGCGGGTTGACTCCCT
GACCGGCGAAGTCCTGGGGCATGTCCAAGTAATCATCGAGAGGATGGAGGAGACAGGCACAGACTGGTCTTCCGT
CGGATTGCAAGTTGTGTATTTCCACCAAGTCGGCATCGATAGCCACGCAGTTGTCGACGACCTCACGGGAAGACT
CAGCGTCCAGGTTCAGGGCGGCCTCACCAAGCCAGGGCGCCACCGTATCTGCACCGTGGCCATGGCAGAGAACCA
GCAGCCGGTGGCGATGCCCTCAGTTGAGAGCGGGCCCATGAATGATTGCACATGGTTTAGCGTCGAGAGCACAAA
GGAAACGCAGGCTATGGCGGATGCAGAGCCAACCAATCTCGAGCGGCATATTCCGTCCATCGCCCGGGATGTGCC
GTTGCCGTCCGGCCTGCGTTCTCTTTCCTCCCAGCGTTTTCGGGAGCATTCACAGCAGCTTCTGGGGGTCAACGC
AACGGAGAGGGCCCGCGGACTCCTGTACAGCGTTTTGTACAGCTCAGCCCTCTTGTCCAAAACGGGTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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