Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2766
Gene name
LocationContig_1681:34..2182
Strand+
Gene length (bp)2148
Transcript length (bp)1974
Coding sequence length (bp)1974
Protein length (aa) 658

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 2.6E-12 151 298

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O59744|YN28_SCHPO Uncharacterized transcriptional regulatory protein C530.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.08 PE=3 SV=1 199 425 8.0E-12
sp|P38699|STB5_YEAST Protein STB5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STB5 PE=1 SV=1 122 393 9.0E-10
sp|O14130|YF54_SCHPO Uncharacterized transcriptional regulatory protein C3C7.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3C7.04 PE=3 SV=1 212 491 4.0E-09
sp|O59741|YN25_SCHPO Uncharacterized transcriptional regulatory protein C530.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.05 PE=3 SV=2 226 351 2.0E-08
sp|P87000|ACU15_NEUCR Transcriptional activator protein acu-15 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=acu-15 PE=1 SV=2 152 451 1.0E-06

GO

GO Term Description Terminal node
GO:0006351 transcription, DNA-templated Yes
GO:0003677 DNA binding Yes
GO:0008270 zinc ion binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901360 organic cyclic compound metabolic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0009987 cellular process No
GO:1901363 heterocyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0003676 nucleic acid binding No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0005488 binding No
GO:0044249 cellular biosynthetic process No
GO:0009058 biosynthetic process No
GO:0008150 biological_process No
GO:0046483 heterocycle metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0043170 macromolecule metabolic process No
GO:0044237 cellular metabolic process No
GO:0046914 transition metal ion binding No
GO:1901576 organic substance biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0003674 molecular_function No
GO:0019438 aromatic compound biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0008152 metabolic process No
GO:0046872 metal ion binding No
GO:0043167 ion binding No
GO:0044238 primary metabolic process No
GO:0043169 cation binding No
GO:0016070 RNA metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0090304 nucleic acid metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2766
LQADSSSRLAPAAAHERTLVGGAAPSPSQSSVAVPRPPELAAHAGSGSFRGPTSMAFNLDVANSTIANMGYCAID
EADDQDHVSGDVPVPMAANASFDALLEFDKDETIRLCRFYEDEIGIMYPVLDIQTVIAHAKYMAPFLESARNQQR
PPEAINDDKTLQLKMIMCCALVVEQHGHSDKAVRLYESMEAVVNRKLMADHGDVAQLPLLCLLAGYRFLSIDEVL
AWRVMGQVVRLCVELGIHQKRGLMSIQDESERRIALLSFWSAYVLDRRWSFATGLPFTVQDDEIDPQLPMPDEYP
YLVAMITYSRLGAKVWRQVSHFGPVLARDLRQEEIESLDRDILQWYETIPEDVKLHSWDAENPVSSTPCYDLQRL
RIWTYLRRNQIRIWLYTPVLHSATSIIANPQQAQRAVDMAKDTIQCLNHLNSTTNLYRRCQVFYHQFLTSAIAIV
FLASVHAPVRFSAACRDEFYLALDLVKDLSAKSWVSKRVWRTIKSLKDVAPRFGLDPDDDAHSSAALGMIGLAKA
HLESGSVAQTSPFPDLALPPVPPPPPPPQQQQQAQAQAQAQAQAQAQAQAQAQAQAQAQAQEVQLRQNGERLQSE
LSRIFEGYVGLNNRFHLGTSAGEDQLASHSGLTTPDSTGSLFAAADGTVFPQLREMF*
Coding >Hirsu2|2766
CTGCAGGCCGACTCGTCGTCGCGCCTGGCCCCGGCCGCCGCCCACGAGCGCACCCTGGTCGGCGGCGCCGCGCCC
TCGCCCTCGCAGAGCTCCGTCGCCGTGCCGCGCCCGCCCGAGCTCGCCGCCCACGCCGGCTCCGGCTCCTTCCGG
GGGCCGACGAGCATGGCCTTTAACCTGGACGTCGCCAACAGCACCATCGCCAACATGGGCTACTGCGCCATCGAC
GAGGCCGACGACCAGGACCACGTCTCCGGCGACGTCCCGGTGCCCATGGCCGCCAACGCCTCCTTCGACGCCCTC
TTGGAGTTCGACAAGGACGAGACGATCCGGCTCTGCCGCTTCTACGAGGACGAGATCGGCATCATGTACCCGGTC
CTCGACATCCAGACCGTCATCGCGCACGCCAAGTACATGGCGCCCTTCCTCGAGTCCGCCAGGAACCAGCAGCGG
CCGCCCGAGGCCATCAACGACGACAAGACGCTGCAGCTCAAGATGATCATGTGCTGCGCGCTCGTCGTCGAGCAG
CACGGCCACAGCGACAAGGCCGTCCGGCTGTACGAGAGCATGGAGGCCGTCGTCAACCGGAAGCTCATGGCCGAC
CACGGCGACGTGGCTCAGCTGCCGCTGCTGTGCCTCCTCGCCGGCTACCGCTTCCTGTCCATCGACGAGGTGCTC
GCCTGGCGGGTCATGGGCCAGGTCGTCCGGCTGTGCGTCGAGCTGGGCATCCACCAGAAGAGGGGCCTGATGAGC
ATCCAGGACGAGTCGGAGAGGAGGATCGCGCTCCTCAGCTTCTGGTCGGCCTACGTGCTGGACCGTCGCTGGTCC
TTTGCCACGGGGCTCCCCTTCACAGTGCAGGACGATGAGATCGATCCGCAGCTCCCCATGCCTGACGAATATCCC
TACCTCGTTGCCATGATAACGTATTCTCGGCTAGGGGCCAAGGTGTGGAGGCAGGTGTCGCATTTCGGGCCCGTC
CTGGCCCGGGACCTGCGCCAGGAGGAGATCGAAAGCCTCGACCGCGACATTCTGCAGTGGTACGAGACGATACCG
GAGGATGTCAAGCTGCACAGCTGGGACGCGGAGAATCCGGTGTCGTCGACTCCGTGCTACGACCTGCAGCGGCTG
AGGATATGGACCTATCTGAGGCGCAACCAGATCCGGATCTGGCTGTACACGCCGGTGCTGCACAGCGCGACGAGC
ATCATTGCGAACCCGCAGCAGGCGCAGCGCGCCGTGGACATGGCCAAGGACACGATCCAGTGCCTGAACCACCTC
AACAGCACGACGAACCTGTACCGTCGGTGCCAGGTCTTCTACCACCAGTTCCTCACCTCGGCCATCGCCATCGTC
TTCCTGGCCTCGGTCCACGCGCCCGTGCGCTTCAGCGCCGCCTGCCGCGACGAGTTCTACCTGGCCCTCGACCTG
GTCAAGGACCTGTCCGCCAAGAGCTGGGTGTCGAAGCGCGTGTGGCGCACCATCAAGTCGCTCAAGGACGTGGCG
CCCCGCTTCGGGCTGGACCCGGACGACGATGCCCATTCCTCCGCAGCACTGGGCATGATCGGGCTGGCCAAGGCC
CATCTGGAGTCGGGCTCGGTTGCACAGACGAGCCCCTTCCCCGACTTGGCCCTGCCGCCCGTGCCTCCGCCTCCA
CCGCCGCCGCAGCAGCAGCAGCAGGCGCAGGCGCAGGCGCAGGCACAGGCACAGGCACAGGCGCAGGCGCAGGCA
CAGGCACAGGCACAGGCACAGGCACAGGCACAGGAAGTGCAGCTGCGGCAGAACGGGGAACGCCTTCAGAGCGAG
CTGTCCCGTATTTTCGAGGGCTACGTCGGCCTGAACAACAGGTTTCACTTGGGCACCTCCGCCGGCGAGGACCAG
CTCGCTTCCCACTCCGGGCTGACGACCCCGGACTCGACCGGCAGCCTGTTCGCCGCCGCCGACGGGACGGTGTTT
CCGCAGCTGCGAGAGATGTTTTAA
Transcript >Hirsu2|2766
CTGCAGGCCGACTCGTCGTCGCGCCTGGCCCCGGCCGCCGCCCACGAGCGCACCCTGGTCGGCGGCGCCGCGCCC
TCGCCCTCGCAGAGCTCCGTCGCCGTGCCGCGCCCGCCCGAGCTCGCCGCCCACGCCGGCTCCGGCTCCTTCCGG
GGGCCGACGAGCATGGCCTTTAACCTGGACGTCGCCAACAGCACCATCGCCAACATGGGCTACTGCGCCATCGAC
GAGGCCGACGACCAGGACCACGTCTCCGGCGACGTCCCGGTGCCCATGGCCGCCAACGCCTCCTTCGACGCCCTC
TTGGAGTTCGACAAGGACGAGACGATCCGGCTCTGCCGCTTCTACGAGGACGAGATCGGCATCATGTACCCGGTC
CTCGACATCCAGACCGTCATCGCGCACGCCAAGTACATGGCGCCCTTCCTCGAGTCCGCCAGGAACCAGCAGCGG
CCGCCCGAGGCCATCAACGACGACAAGACGCTGCAGCTCAAGATGATCATGTGCTGCGCGCTCGTCGTCGAGCAG
CACGGCCACAGCGACAAGGCCGTCCGGCTGTACGAGAGCATGGAGGCCGTCGTCAACCGGAAGCTCATGGCCGAC
CACGGCGACGTGGCTCAGCTGCCGCTGCTGTGCCTCCTCGCCGGCTACCGCTTCCTGTCCATCGACGAGGTGCTC
GCCTGGCGGGTCATGGGCCAGGTCGTCCGGCTGTGCGTCGAGCTGGGCATCCACCAGAAGAGGGGCCTGATGAGC
ATCCAGGACGAGTCGGAGAGGAGGATCGCGCTCCTCAGCTTCTGGTCGGCCTACGTGCTGGACCGTCGCTGGTCC
TTTGCCACGGGGCTCCCCTTCACAGTGCAGGACGATGAGATCGATCCGCAGCTCCCCATGCCTGACGAATATCCC
TACCTCGTTGCCATGATAACGTATTCTCGGCTAGGGGCCAAGGTGTGGAGGCAGGTGTCGCATTTCGGGCCCGTC
CTGGCCCGGGACCTGCGCCAGGAGGAGATCGAAAGCCTCGACCGCGACATTCTGCAGTGGTACGAGACGATACCG
GAGGATGTCAAGCTGCACAGCTGGGACGCGGAGAATCCGGTGTCGTCGACTCCGTGCTACGACCTGCAGCGGCTG
AGGATATGGACCTATCTGAGGCGCAACCAGATCCGGATCTGGCTGTACACGCCGGTGCTGCACAGCGCGACGAGC
ATCATTGCGAACCCGCAGCAGGCGCAGCGCGCCGTGGACATGGCCAAGGACACGATCCAGTGCCTGAACCACCTC
AACAGCACGACGAACCTGTACCGTCGGTGCCAGGTCTTCTACCACCAGTTCCTCACCTCGGCCATCGCCATCGTC
TTCCTGGCCTCGGTCCACGCGCCCGTGCGCTTCAGCGCCGCCTGCCGCGACGAGTTCTACCTGGCCCTCGACCTG
GTCAAGGACCTGTCCGCCAAGAGCTGGGTGTCGAAGCGCGTGTGGCGCACCATCAAGTCGCTCAAGGACGTGGCG
CCCCGCTTCGGGCTGGACCCGGACGACGATGCCCATTCCTCCGCAGCACTGGGCATGATCGGGCTGGCCAAGGCC
CATCTGGAGTCGGGCTCGGTTGCACAGACGAGCCCCTTCCCCGACTTGGCCCTGCCGCCCGTGCCTCCGCCTCCA
CCGCCGCCGCAGCAGCAGCAGCAGGCGCAGGCGCAGGCGCAGGCACAGGCACAGGCACAGGCGCAGGCGCAGGCA
CAGGCACAGGCACAGGCACAGGCACAGGCACAGGAAGTGCAGCTGCGGCAGAACGGGGAACGCCTTCAGAGCGAG
CTGTCCCGTATTTTCGAGGGCTACGTCGGCCTGAACAACAGGTTTCACTTGGGCACCTCCGCCGGCGAGGACCAG
CTCGCTTCCCACTCCGGGCTGACGACCCCGGACTCGACCGGCAGCCTGTTCGCCGCCGCCGACGGGACGGTGTTT
CCGCAGCTGCGAGAGATGTTTTAA
Gene >Hirsu2|2766
CTGCAGGCCGACTCGTCGTCGCGCCTGGCCCCGGCCGCCGCCCACGAGCGCACCCTGGTCGGCGGCGCCGCGCCC
TCGCCCTCGCAGAGCTCCGTCGCCGTGCCGCGCCCGCCCGAGCTCGCCGCCCACGCCGGCTCCGGCTCCTTCCGG
GGGCCGACGAGCATGGCCTTTAACCTGGACGTCGCCAACAGCACCATCGCCAACATGGGCTACTGCGCCATCGAC
GAGGCCGACGACCAGGACCACGTCTCCGGCGACGTCCCGGTGCCCATGGCCGCCAACGCCTCCTTCGACGCCCTC
TTGGAGTTCGACAAGGACGAGACGATCCGGCTCTGCCGCTTCTACGAGGACGAGATCGGCATCATGTACCCGGTC
CTCGACATCCAGACCGTCATCGCGCACGCCAAGTACATGGCGCCCTTCCTCGAGTCCGCCAGGAACCAGCAGCGG
CCGCCCGAGGCCATCAACGACGACAAGACGCTGCAGCTCAAGATGATCATGTGCTGCGCGCTCGTCGTCGAGCAG
CACGGCCACAGCGACAAGGCCGTCCGGCTGTACGAGAGCATGGAGGCCGTCGTCAACCGGAAGCTCATGGCCGAC
CACGGCGACGTGGCTCAGCTGCCGCTGCTGTGCCTCCTCGCCGGCTACCGCTTCCTGTCCATCGACGAGGTGCTC
GCCTGGCGGGTCATGGGCCAGGTCGTCCGGCTGTGCGTCGAGCTGGGCATCCACCAGAAGAGGGGCCTGATGAGC
ATCCAGGACGAGTCGGAGAGGAGGATCGCGCTCCTCAGCTTCTGGTCGGCCTACGTGCTGGACCGTCGCTGGTCC
TTTGCCACGGGGCTCCCCTTCACAGTGCAGGACGATGAGATCGATCCGCAGCTCCCCATGCCTGTGAGTGAGAGG
CTCCCCCCTCCCTCCCTCGGGCTCACGTCTTGTGTTCCTTTTGTCCGCCGCCGTCTGACTCTTGCTTCCGCCCTC
CGCCAAGGACGAATATCCCTACCTCGTTGCCATGATAACGTATTCTCGGCTAGGGGCCAAGGTGTGGAGGCAGGT
GTCGCATTTCGGGCCCGTCCTGGCCCGGGACCTGCGCCAGGAGGAGATCGAAAGCCTCGACCGCGACATTCTGCA
GTGGTACGAGACGATACCGGAGGATGTCAAGCTGCACAGCTGGGACGCGGAGAATCCGGTGTCGTCGACTCCGTG
CTACGACCTGCAGCGGCTGAGGATATGGACCTATCTGAGGCGCAACCAGGTGAGATACGGGAGACAGCTACTCAC
TTACTTGCTGGCAATGCTAGGTAATCTCCTACTGACGAAGGAGGGGCGCAACAGATCCGGATCTGGCTGTACACG
CCGGTGCTGCACAGCGCGACGAGCATCATTGCGAACCCGCAGCAGGCGCAGCGCGCCGTGGACATGGCCAAGGAC
ACGATCCAGTGCCTGAACCACCTCAACAGCACGACGAACCTGTACCGTCGGTGCCAGGTCTTCTACCACCAGTTC
CTCACCTCGGCCATCGCCATCGTCTTCCTGGCCTCGGTCCACGCGCCCGTGCGCTTCAGCGCCGCCTGCCGCGAC
GAGTTCTACCTGGCCCTCGACCTGGTCAAGGACCTGTCCGCCAAGAGCTGGGTGTCGAAGCGCGTGTGGCGCACC
ATCAAGTCGCTCAAGGACGTGGCGCCCCGCTTCGGGCTGGACCCGGACGACGATGCCCATTCCTCCGCAGCACTG
GGCATGATCGGGCTGGCCAAGGCCCATCTGGAGTCGGGCTCGGTTGCACAGACGAGCCCCTTCCCCGACTTGGCC
CTGCCGCCCGTGCCTCCGCCTCCACCGCCGCCGCAGCAGCAGCAGCAGGCGCAGGCGCAGGCGCAGGCACAGGCA
CAGGCACAGGCGCAGGCGCAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGAAGTGCAGCTGCGGCAG
AACGGGGAACGCCTTCAGAGCGAGCTGTCCCGTATTTTCGAGGGCTACGTCGGCCTGAACAACAGGTTTCACTTG
GGCACCTCCGCCGGCGAGGACCAGCTCGCTTCCCACTCCGGGCTGACGACCCCGGACTCGACCGGCAGCCTGTTC
GCCGCCGCCGACGGGACGGTGTTTCCGCAGCTGCGAGAGATGTTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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