Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2761
Gene name
LocationContig_168:22888..23991
Strand+
Gene length (bp)1103
Transcript length (bp)1041
Coding sequence length (bp)1041
Protein length (aa) 347

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 3.8E-15 40 184
PF08659 KR KR domain 4.2E-05 41 132

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2 36 290 5.0E-28
sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1 36 326 4.0E-27
sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1 36 325 6.0E-23
sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1 36 325 8.0E-23
sp|Q8CEE7|RDH13_MOUSE Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=1 SV=1 34 335 9.0E-23
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2 36 290 5.0E-28
sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1 36 326 4.0E-27
sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1 36 325 6.0E-23
sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1 36 325 8.0E-23
sp|Q8CEE7|RDH13_MOUSE Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=1 SV=1 34 335 9.0E-23
sp|Q9VLU5|WWOX_DROME WW domain-containing oxidoreductase OS=Drosophila melanogaster GN=Wwox PE=2 SV=1 36 290 2.0E-22
sp|Q9QYF1|RDH11_MOUSE Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=1 SV=2 37 326 5.0E-21
sp|Q8NBN7|RDH13_HUMAN Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2 34 330 2.0E-20
sp|Q803A8|WWOX_DANRE WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1 36 290 3.0E-20
sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1 21 326 8.0E-19
sp|Q96NR8|RDH12_HUMAN Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3 30 332 9.0E-19
sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2 36 326 2.0E-18
sp|Q9ERI6|RDH14_MOUSE Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1 37 326 3.0E-18
sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1 30 332 7.0E-18
sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1 39 332 1.0E-16
sp|Q17QU7|DHR13_BOVIN Dehydrogenase/reductase SDR family member 13 OS=Bos taurus GN=DHRS13 PE=2 SV=1 28 340 2.0E-16
sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1 36 330 2.0E-15
sp|Q5SS80|DHR13_MOUSE Dehydrogenase/reductase SDR family member 13 OS=Mus musculus GN=Dhrs13 PE=1 SV=1 36 336 1.0E-14
sp|P35320|OXIR_STRLI Probable oxidoreductase OS=Streptomyces lividans PE=3 SV=1 36 333 3.0E-14
sp|Q42850|PORB_HORVU Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1 27 256 9.0E-13
sp|Q6UX07|DHR13_HUMAN Dehydrogenase/reductase SDR family member 13 OS=Homo sapiens GN=DHRS13 PE=2 SV=1 36 340 2.0E-12
sp|O80333|POR_MARPA Protochlorophyllide reductase, chloroplastic OS=Marchantia paleacea GN=PORA PE=2 SV=1 29 184 6.0E-12
sp|O74959|YJCD_SCHPO Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1 36 330 7.0E-12
sp|Q03326|OXIR_STRAT Probable oxidoreductase OS=Streptomyces antibioticus PE=3 SV=1 36 326 1.0E-11
sp|O48741|PORC_ARATH Protochlorophyllide reductase C, chloroplastic OS=Arabidopsis thaliana GN=PORC PE=1 SV=1 41 154 3.0E-11
sp|Q42536|PORA_ARATH Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=1 SV=2 33 184 7.0E-11
sp|Q39617|POR_CHLRE Protochlorophyllide reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PORA PE=3 SV=1 30 154 8.0E-11
sp|Q8VBZ0|DHRSX_MOUSE Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=1 SV=2 39 330 2.0E-09
sp|P21218|PORB_ARATH Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana GN=PORB PE=1 SV=3 6 154 3.0E-09
sp|Q8W3D9|PORB_ORYSJ Protochlorophyllide reductase B, chloroplastic OS=Oryza sativa subsp. japonica GN=PORB PE=2 SV=1 41 256 4.0E-09
sp|Q9SDT1|POR_DAUCA Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1 27 154 9.0E-09
sp|Q41249|PORA_CUCSA Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1 41 154 1.0E-08
sp|Q8MI29|CBR1_MACFA Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1 38 185 1.0E-08
sp|Q8N5I4|DHRSX_HUMAN Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2 40 330 6.0E-08
sp|O75828|CBR3_HUMAN Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CBR3 PE=1 SV=3 39 182 6.0E-08
sp|Q28960|CBR1_PIG Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1 PE=1 SV=3 40 194 1.0E-07
sp|P16152|CBR1_HUMAN Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3 38 185 1.0E-07
sp|Q5RCU5|CBR1_PONAB Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3 38 185 1.0E-07
sp|Q9M2E2|SDR1_ARATH (+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1 40 247 2.0E-07
sp|Q9Y394|DHRS7_HUMAN Dehydrogenase/reductase SDR family member 7 OS=Homo sapiens GN=DHRS7 PE=1 SV=1 32 171 5.0E-07
sp|Q59987|POR_SYNY3 Light-dependent protochlorophyllide reductase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=por PE=3 SV=2 41 256 5.0E-07
sp|Q9RPT1|RHLG_PSEAE Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=rhlG PE=1 SV=1 36 246 9.0E-07
sp|Q6WAU1|IPIPR_MENPI (-)-isopiperitenone reductase OS=Mentha piperita PE=1 SV=1 40 171 4.0E-06
sp|Q01289|POR_PEA Protochlorophyllide reductase, chloroplastic OS=Pisum sativum GN=3PCR PE=1 SV=1 43 154 5.0E-06
sp|Q9ZAU1|DNRU_STRPE Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces peucetius GN=dnrU PE=3 SV=1 37 326 5.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2761
MAPQFSISPEKEASMPQYLYRQLLGRTAPLSRREADLGGKTAIVTGSNVGLGLEVARQLLDLGLGRLVMAVRTVS
RGEEAARRLLEGRPAGACRIDVWPLDLASYKSIGDFADRARTLDRLDMAVLNAGVFKADEAFDPASGFEESVQVN
YLSNALLMALLLPALRPRAAGSGPGRLVLLSSDTSGWVAFRERSARPLLATYKQPAAKWDMQERYGTSKLLGQLF
LTELARRVPPSAVTVDAVNPGFCYGTDLQRDGKGTLLGFVLKIFTRIIGKPAQKGALGIVHAAVSFGQEVHGQYV
EDGEIRPMAPIIYKPEGEEVAKVLWEETMKELSFAPIQEAIQEVNN*
Coding >Hirsu2|2761
ATGGCTCCCCAGTTCAGCATCAGCCCCGAGAAGGAGGCCAGCATGCCGCAGTACCTGTACCGCCAGCTGTTGGGC
CGGACGGCGCCGCTGAGCCGGCGCGAGGCCGACCTGGGCGGCAAGACGGCCATCGTGACCGGCTCCAACGTCGGG
CTCGGGCTCGAGGTCGCGCGGCAGCTGCTCGACCTGGGCCTGGGCCGGCTCGTCATGGCGGTCCGGACCGTGTCG
CGCGGCGAGGAGGCCGCGCGCCGCCTGCTCGAGGGCCGGCCCGCCGGCGCGTGCCGCATCGACGTCTGGCCGCTC
GACCTGGCCTCGTACAAGTCCATCGGCGACTTCGCCGACCGGGCCCGGACCCTCGACCGGCTCGACATGGCCGTC
CTCAACGCCGGCGTCTTCAAGGCCGACGAGGCCTTCGACCCGGCCTCGGGCTTCGAGGAGAGCGTCCAGGTCAAC
TACCTGTCCAACGCGCTGCTGATGGCGCTGCTGCTGCCCGCCCTGCGGCCGCGCGCCGCCGGCTCCGGCCCGGGC
CGCCTGGTCCTCCTCTCGTCCGACACGTCCGGCTGGGTCGCGTTCCGCGAGCGCTCCGCCCGCCCGCTCCTCGCC
ACCTACAAGCAGCCGGCCGCCAAGTGGGACATGCAGGAGCGCTACGGCACCAGCAAGCTGCTGGGCCAGCTGTTC
CTGACGGAGCTGGCCCGCCGCGTGCCGCCGTCGGCCGTCACCGTCGACGCCGTCAACCCGGGCTTCTGCTACGGC
ACCGACCTCCAGCGCGACGGCAAGGGCACCCTGCTCGGCTTCGTCCTCAAGATCTTCACCCGCATCATCGGCAAG
CCGGCCCAGAAGGGCGCCCTCGGCATCGTCCACGCCGCCGTCAGCTTCGGCCAGGAGGTCCACGGCCAGTACGTC
GAGGACGGAGAGATCAGACCCATGGCGCCCATCATCTACAAGCCCGAGGGCGAAGAGGTCGCCAAGGTGCTGTGG
GAGGAGACGATGAAGGAGCTGTCGTTTGCCCCTATACAGGAAGCCATCCAGGAGGTCAACAACTAG
Transcript >Hirsu2|2761
ATGGCTCCCCAGTTCAGCATCAGCCCCGAGAAGGAGGCCAGCATGCCGCAGTACCTGTACCGCCAGCTGTTGGGC
CGGACGGCGCCGCTGAGCCGGCGCGAGGCCGACCTGGGCGGCAAGACGGCCATCGTGACCGGCTCCAACGTCGGG
CTCGGGCTCGAGGTCGCGCGGCAGCTGCTCGACCTGGGCCTGGGCCGGCTCGTCATGGCGGTCCGGACCGTGTCG
CGCGGCGAGGAGGCCGCGCGCCGCCTGCTCGAGGGCCGGCCCGCCGGCGCGTGCCGCATCGACGTCTGGCCGCTC
GACCTGGCCTCGTACAAGTCCATCGGCGACTTCGCCGACCGGGCCCGGACCCTCGACCGGCTCGACATGGCCGTC
CTCAACGCCGGCGTCTTCAAGGCCGACGAGGCCTTCGACCCGGCCTCGGGCTTCGAGGAGAGCGTCCAGGTCAAC
TACCTGTCCAACGCGCTGCTGATGGCGCTGCTGCTGCCCGCCCTGCGGCCGCGCGCCGCCGGCTCCGGCCCGGGC
CGCCTGGTCCTCCTCTCGTCCGACACGTCCGGCTGGGTCGCGTTCCGCGAGCGCTCCGCCCGCCCGCTCCTCGCC
ACCTACAAGCAGCCGGCCGCCAAGTGGGACATGCAGGAGCGCTACGGCACCAGCAAGCTGCTGGGCCAGCTGTTC
CTGACGGAGCTGGCCCGCCGCGTGCCGCCGTCGGCCGTCACCGTCGACGCCGTCAACCCGGGCTTCTGCTACGGC
ACCGACCTCCAGCGCGACGGCAAGGGCACCCTGCTCGGCTTCGTCCTCAAGATCTTCACCCGCATCATCGGCAAG
CCGGCCCAGAAGGGCGCCCTCGGCATCGTCCACGCCGCCGTCAGCTTCGGCCAGGAGGTCCACGGCCAGTACGTC
GAGGACGGAGAGATCAGACCCATGGCGCCCATCATCTACAAGCCCGAGGGCGAAGAGGTCGCCAAGGTGCTGTGG
GAGGAGACGATGAAGGAGCTGTCGTTTGCCCCTATACAGGAAGCCATCCAGGAGGTCAACAACTAG
Gene >Hirsu2|2761
ATGGCTCCCCAGTTCAGCATCAGCCCCGAGAAGGAGGCCAGCATGCCGCAGTACCTGTACCGCCAGCTGTTGGGC
CGGACGGCGCCGCTGAGCCGGCGCGAGGCCGACCTGGGCGGCAAGACGGCCATCGTGACCGGCTCCAACGTCGGG
CTCGGGCTCGAGGTCGCGCGGCAGCTGCTCGACCTGGGCCTGGGCCGGCTCGTCATGGCGGTCCGGACCGTGTCG
CGCGGCGAGGAGGCCGCGCGCCGCCTGCTCGAGGGCCGGCCCGCCGGCGCGTGCCGCATCGACGTCTGGCCGCTC
GACCTGGCCTCGTACAAGTCCATCGGCGACTTCGCCGACCGGGCCCGGACCCTCGACCGGCTCGACATGGCCGTC
CTCAACGCCGGCGTCTTCAAGGCCGACGAGGCCTTCGACCCGGCCTCGGGCTTCGAGGAGAGCGTCCAGGTCAAC
TACCTGTCCAACGCGCTGCTGATGGCGCTGCTGCTGCCCGCCCTGCGGCCGCGCGCCGCCGGCTCCGGCCCGGGC
CGCCTGGTCCTCCTCTCGTCCGACACGTCCGGCTGGGTCGCGTTCCGCGAGCGCTCCGCCCGCCCGCTCCTCGCC
ACCTACAAGCAGCCGGCCGCCAAGTGGGACATGCAGGAGCGCTACGGCACCAGCAAGCTGCTGGGCCAGCTGTTC
CTGACGGAGCTGGCCCGCCGCGTGCCGCCGTCGGCCGTCACCGTCGACGCCGTCAACCCGGGCTTCTGCTACGGC
ACCGACCTCCAGCGCGACGGCAAGGGCACCCTGCTCGGCTTCGTCCTCAAGATCTTCACCCGCATCATCGGCAAG
CCGGCCCAGAAGGGCGCCCTCGGCATCGTCCACGCCGCCGTCAGCTTCGGCCAGGAGGTCCACGGCCAGTACGTC
GAGGACGGAGAGATCAGACCGTAAGTCCCGTCCGAGACCCGAGCTGATGGCCAACCGCTGACCACGACCTCTTAT
CCAATAGCATGGCGCCCATCATCTACAAGCCCGAGGGCGAAGAGGTCGCCAAGGTGCTGTGGGAGGAGACGATGA
AGGAGCTGTCGTTTGCCCCTATACAGGAAGCCATCCAGGAGGTCAACAACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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