Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|276
Gene name
LocationContig_1050:913..1572
Strand+
Gene length (bp)659
Transcript length (bp)549
Coding sequence length (bp)549
Protein length (aa) 183

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6793 0.3935 0.1164 0.2647 0.2895 0.0253 0.0974 0.0991 0.0822 0.0345

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5056
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|982
Ophiocordyceps australis map64 (Brazil) OphauB2|2800
Ophiocordyceps camponoti-floridani Ophcf2|02410
Ophiocordyceps camponoti-rufipedis Ophun1|6753
Ophiocordyceps kimflemingae Ophio5|4510
Ophiocordyceps subramaniannii Hirsu2|276 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|276
MSSSRSGSVSSKSSSKSNRPRSSVLQLIDCLTTHRVNTLTELCRIERVAASCEDEADARAFQKPMTAAWVHYVTS
HQLLTELRGLTRSYPFCGDVVREAYRRVRSDPNSNRSWNLAWLCLRTMKDDGLITAYAAAEAARPEMWTPMRPSA
EDVAKLAACFEHEWNTAVDTMLRHWQRAPAWY*
Coding >Hirsu2|276
ATGTCGTCAAGCCGTAGCGGCAGCGTCAGTTCAAAGAGTAGCAGCAAGTCCAACCGGCCCAGGTCATCCGTGCTA
CAGCTCATCGACTGCCTCACAACACACCGAGTCAACACACTGACGGAGCTCTGCCGCATCGAGCGCGTGGCGGCG
TCTTGCGAGGATGAAGCCGACGCGAGGGCCTTTCAGAAGCCGATGACGGCGGCTTGGGTACACTACGTCACCAGC
CACCAGCTACTTACGGAGCTACGCGGCCTCACAAGAAGCTACCCTTTCTGCGGCGACGTGGTCCGAGAGGCGTAT
CGTCGGGTCCGCAGCGACCCCAACAGCAACCGCAGCTGGAACCTGGCCTGGCTGTGCCTGCGAACGATGAAGGAC
GACGGCCTGATTACGGCGTACGCGGCGGCGGAGGCGGCGAGGCCCGAGATGTGGACGCCGATGCGGCCGAGCGCC
GAGGATGTGGCCAAGCTGGCGGCGTGCTTCGAGCACGAGTGGAACACGGCCGTCGACACGATGCTGCGGCACTGG
CAGCGGGCGCCGGCATGGTACTGA
Transcript >Hirsu2|276
ATGTCGTCAAGCCGTAGCGGCAGCGTCAGTTCAAAGAGTAGCAGCAAGTCCAACCGGCCCAGGTCATCCGTGCTA
CAGCTCATCGACTGCCTCACAACACACCGAGTCAACACACTGACGGAGCTCTGCCGCATCGAGCGCGTGGCGGCG
TCTTGCGAGGATGAAGCCGACGCGAGGGCCTTTCAGAAGCCGATGACGGCGGCTTGGGTACACTACGTCACCAGC
CACCAGCTACTTACGGAGCTACGCGGCCTCACAAGAAGCTACCCTTTCTGCGGCGACGTGGTCCGAGAGGCGTAT
CGTCGGGTCCGCAGCGACCCCAACAGCAACCGCAGCTGGAACCTGGCCTGGCTGTGCCTGCGAACGATGAAGGAC
GACGGCCTGATTACGGCGTACGCGGCGGCGGAGGCGGCGAGGCCCGAGATGTGGACGCCGATGCGGCCGAGCGCC
GAGGATGTGGCCAAGCTGGCGGCGTGCTTCGAGCACGAGTGGAACACGGCCGTCGACACGATGCTGCGGCACTGG
CAGCGGGCGCCGGCATGGTACTGA
Gene >Hirsu2|276
ATGTCGTCAAGCCGTAGCGGCAGCGTCAGTTCAAAGAGTAGCAGCAAGTCCAACCGGCCCAGGGTGAGTACCACA
ACGTCCATGACTGCTGCCTTGCCTATATGCCGCCATATCTTTTTTTCGACGGTTTAACACGACGATGGATTCTGA
CTTCTTTTTTTCCCCCTCCTCAGTCATCCGTGCTACAGCTCATCGACTGCCTCACAACACACCGAGTCAACACAC
TGACGGAGCTCTGCCGCATCGAGCGCGTGGCGGCGTCTTGCGAGGATGAAGCCGACGCGAGGGCCTTTCAGAAGC
CGATGACGGCGGCTTGGGTACACTACGTCACCAGCCACCAGCTACTTACGGAGCTACGCGGCCTCACAAGAAGCT
ACCCTTTCTGCGGCGACGTGGTCCGAGAGGCGTATCGTCGGGTCCGCAGCGACCCCAACAGCAACCGCAGCTGGA
ACCTGGCCTGGCTGTGCCTGCGAACGATGAAGGACGACGGCCTGATTACGGCGTACGCGGCGGCGGAGGCGGCGA
GGCCCGAGATGTGGACGCCGATGCGGCCGAGCGCCGAGGATGTGGCCAAGCTGGCGGCGTGCTTCGAGCACGAGT
GGAACACGGCCGTCGACACGATGCTGCGGCACTGGCAGCGGGCGCCGGCATGGTACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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