Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2754
Gene name
LocationContig_168:12378..13061
Strand+
Gene length (bp)683
Transcript length (bp)606
Coding sequence length (bp)606
Protein length (aa) 202

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07883 Cupin_2 Cupin domain 1.9E-06 105 173

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2754
MAAEQPTSDLLLTSAGYISTGFPAPGLRRTVRHITGHNDEGKGIFLSTDCGDHHRIIGNEQAIANIVYSTKETPV
ELNGDVDLKYARENEPGLHIHNGSVCRMIDFAPNVLSPMHRAVSLDYGVVIEGEFKLILDSGEERIMRQGDVSVQ
RASAHQWHNITGNGTLPGRMMWVLLDCKPVVINGQALGEELNELQPYYEGR*
Coding >Hirsu2|2754
ATGGCTGCTGAACAACCGACTTCGGACCTGCTCCTCACCAGCGCCGGGTACATCTCGACGGGCTTCCCGGCCCCG
GGCCTCCGCCGGACGGTGCGGCACATAACCGGGCACAACGACGAGGGCAAGGGCATCTTCCTCAGCACCGATTGC
GGCGATCACCACCGCATCATCGGCAATGAGCAGGCCATCGCCAACATCGTCTACTCGACCAAGGAGACGCCCGTG
GAGCTCAACGGCGACGTCGACCTCAAGTACGCACGGGAGAACGAGCCCGGGCTGCACATCCACAATGGCTCCGTC
TGTCGGATGATCGACTTCGCGCCCAACGTGCTGTCGCCGATGCACCGCGCCGTCTCGCTCGACTATGGCGTCGTC
ATCGAGGGTGAGTTCAAGCTGATCCTCGACTCGGGCGAGGAGCGCATCATGCGCCAGGGCGACGTGAGCGTGCAG
CGCGCCTCGGCACACCAGTGGCACAACATCACCGGCAACGGCACCCTGCCCGGCCGCATGATGTGGGTGCTGCTC
GACTGCAAGCCCGTCGTTATCAACGGGCAGGCCCTGGGCGAGGAGCTCAACGAGCTCCAGCCGTACTACGAGGGG
CGCTAG
Transcript >Hirsu2|2754
ATGGCTGCTGAACAACCGACTTCGGACCTGCTCCTCACCAGCGCCGGGTACATCTCGACGGGCTTCCCGGCCCCG
GGCCTCCGCCGGACGGTGCGGCACATAACCGGGCACAACGACGAGGGCAAGGGCATCTTCCTCAGCACCGATTGC
GGCGATCACCACCGCATCATCGGCAATGAGCAGGCCATCGCCAACATCGTCTACTCGACCAAGGAGACGCCCGTG
GAGCTCAACGGCGACGTCGACCTCAAGTACGCACGGGAGAACGAGCCCGGGCTGCACATCCACAATGGCTCCGTC
TGTCGGATGATCGACTTCGCGCCCAACGTGCTGTCGCCGATGCACCGCGCCGTCTCGCTCGACTATGGCGTCGTC
ATCGAGGGTGAGTTCAAGCTGATCCTCGACTCGGGCGAGGAGCGCATCATGCGCCAGGGCGACGTGAGCGTGCAG
CGCGCCTCGGCACACCAGTGGCACAACATCACCGGCAACGGCACCCTGCCCGGCCGCATGATGTGGGTGCTGCTC
GACTGCAAGCCCGTCGTTATCAACGGGCAGGCCCTGGGCGAGGAGCTCAACGAGCTCCAGCCGTACTACGAGGGG
CGCTAG
Gene >Hirsu2|2754
ATGGCTGCTGAACAACCGACTTCGGACCTGCTCCTCACCAGCGCCGGGTACATCTCGACGGGCTTCCCGGCCCCG
GGCCTCCGCCGGACGGTGCGGCACATAACCGGGCACAACGACGAGGGCAAGGGCATCTTCCTCAGCACCGATTGC
GGCGATCACCACCGCATCATCGGCAATGAGCAGGCCATCGCCAACATCGTCTACTCGACCAAGGAGACGCCCGTG
GAGCTCAACGGCGACGTCGACCTCAAGTACGCACGGGAGAACGAGGTAGACGCACCCCGTGTTTGCCTCGACCTG
GCCGCTGTTTCTGGCTCTGGCTGACTGTCTCGAAACTCTCGTCCCAGCCCGGGCTGCACATCCACAATGGCTCCG
TCTGTCGGATGATCGACTTCGCGCCCAACGTGCTGTCGCCGATGCACCGCGCCGTCTCGCTCGACTATGGCGTCG
TCATCGAGGGTGAGTTCAAGCTGATCCTCGACTCGGGCGAGGAGCGCATCATGCGCCAGGGCGACGTGAGCGTGC
AGCGCGCCTCGGCACACCAGTGGCACAACATCACCGGCAACGGCACCCTGCCCGGCCGCATGATGTGGGTGCTGC
TCGACTGCAAGCCCGTCGTTATCAACGGGCAGGCCCTGGGCGAGGAGCTCAACGAGCTCCAGCCGTACTACGAGG
GGCGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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