Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|275
Gene name
LocationContig_105:35936..37106
Strand+
Gene length (bp)1170
Transcript length (bp)1032
Coding sequence length (bp)1032
Protein length (aa) 344

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.415 0.6742 0.2652 0.1387 0.1466 0.0962 0.033 0.0415 0.0732 0.0211

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6572
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|02551
Ophiocordyceps camponoti-rufipedis Ophun1|3596
Ophiocordyceps kimflemingae Ophio5|981
Ophiocordyceps subramaniannii Hirsu2|275 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|275
MLASIFSPQERPPAGSAAEPTPDARASWSPKVPRPARESMTRSRKSSVALTADVVDRDQQPTIVATSRVESSEAA
IDRDPHEPSSIIATSRVETADAVMARESRDGPPKRRITATSFSPTPRVAKKRVARSAPIAALDPIEKPAPKDRER
QKAGPRNQRDADAAHHKKEKEKDKDKDKDKDKEKETEKEKDKEKEEGKEKEKEKDKPDVEASDAQKGDQRAPQDR
DECSFKRFANHRWVGNSMEIRVEWEDGDVTWEPEANLHADALDTLLQYWSRQGGRPTNPVAPDMYDIFAIRKHSR
DRRRLLVEWVGYGPNDASWVSRSAVEETAPEVVKEYWRTMGRR*
Coding >Hirsu2|275
ATGCTGGCCTCGATATTCTCGCCTCAGGAACGTCCTCCGGCCGGCTCGGCTGCCGAGCCGACGCCCGATGCCAGG
GCGTCGTGGTCGCCCAAGGTGCCCCGACCAGCCCGCGAGTCGATGACTCGATCGCGCAAGTCTTCAGTTGCCCTG
ACCGCCGACGTCGTCGACCGTGACCAGCAGCCTACCATCGTTGCCACGTCGCGAGTCGAGTCCAGCGAGGCCGCC
ATAGATCGGGACCCCCACGAGCCCTCTTCCATCATTGCCACCTCGCGCGTCGAGACCGCCGACGCTGTCATGGCC
CGAGAATCACGCGACGGACCGCCCAAACGCCGCATTACCGCCACCTCTTTCTCCCCAACACCCCGTGTCGCCAAA
AAGCGGGTTGCCCGATCTGCACCGATAGCAGCCCTTGATCCCATCGAAAAGCCCGCTCCCAAGGATAGGGAGAGG
CAGAAGGCGGGGCCCCGAAATCAGCGAGACGCCGATGCGGCACACCACAAGAAGGAAAAGGAAAAGGATAAAGAC
AAGGACAAGGACAAGGACAAGGAAAAGGAAACGGAAAAGGAAAAGGACAAGGAAAAGGAGGAAGGAAAAGAAAAG
GAGAAGGAGAAAGACAAGCCCGATGTGGAAGCCAGCGATGCGCAGAAGGGCGACCAACGCGCCCCTCAGGACAGA
GACGAATGCTCCTTCAAGCGCTTCGCCAACCATCGCTGGGTGGGAAACTCGATGGAAATCCGCGTCGAATGGGAG
GACGGCGACGTGACCTGGGAGCCCGAGGCCAACCTGCATGCCGATGCCCTCGATACCCTTCTGCAGTACTGGTCC
AGGCAGGGCGGCCGGCCGACGAACCCCGTCGCCCCGGATATGTACGACATTTTCGCCATCCGCAAGCACAGCAGG
GATCGCCGACGCCTCTTGGTCGAGTGGGTGGGCTACGGCCCCAACGACGCCTCGTGGGTTTCGCGCTCCGCCGTC
GAGGAAACGGCGCCCGAGGTGGTCAAGGAGTACTGGAGGACTATGGGACGGCGCTGA
Transcript >Hirsu2|275
ATGCTGGCCTCGATATTCTCGCCTCAGGAACGTCCTCCGGCCGGCTCGGCTGCCGAGCCGACGCCCGATGCCAGG
GCGTCGTGGTCGCCCAAGGTGCCCCGACCAGCCCGCGAGTCGATGACTCGATCGCGCAAGTCTTCAGTTGCCCTG
ACCGCCGACGTCGTCGACCGTGACCAGCAGCCTACCATCGTTGCCACGTCGCGAGTCGAGTCCAGCGAGGCCGCC
ATAGATCGGGACCCCCACGAGCCCTCTTCCATCATTGCCACCTCGCGCGTCGAGACCGCCGACGCTGTCATGGCC
CGAGAATCACGCGACGGACCGCCCAAACGCCGCATTACCGCCACCTCTTTCTCCCCAACACCCCGTGTCGCCAAA
AAGCGGGTTGCCCGATCTGCACCGATAGCAGCCCTTGATCCCATCGAAAAGCCCGCTCCCAAGGATAGGGAGAGG
CAGAAGGCGGGGCCCCGAAATCAGCGAGACGCCGATGCGGCACACCACAAGAAGGAAAAGGAAAAGGATAAAGAC
AAGGACAAGGACAAGGACAAGGAAAAGGAAACGGAAAAGGAAAAGGACAAGGAAAAGGAGGAAGGAAAAGAAAAG
GAGAAGGAGAAAGACAAGCCCGATGTGGAAGCCAGCGATGCGCAGAAGGGCGACCAACGCGCCCCTCAGGACAGA
GACGAATGCTCCTTCAAGCGCTTCGCCAACCATCGCTGGGTGGGAAACTCGATGGAAATCCGCGTCGAATGGGAG
GACGGCGACGTGACCTGGGAGCCCGAGGCCAACCTGCATGCCGATGCCCTCGATACCCTTCTGCAGTACTGGTCC
AGGCAGGGCGGCCGGCCGACGAACCCCGTCGCCCCGGATATGTACGACATTTTCGCCATCCGCAAGCACAGCAGG
GATCGCCGACGCCTCTTGGTCGAGTGGGTGGGCTACGGCCCCAACGACGCCTCGTGGGTTTCGCGCTCCGCCGTC
GAGGAAACGGCGCCCGAGGTGGTCAAGGAGTACTGGAGGACTATGGGACGGCGCTGA
Gene >Hirsu2|275
ATGCTGGCCTCGATATTCTCGCCTCAGGAACGTCCTCCGGCCGGCTCGGCTGCCGAGCCGACGCCCGATGCCAGG
GCGTCGTGGTCGCCCAAGGTGCCCCGACCAGCCCGCGAGTCGATGACTCGATCGCGCAAGTCTTCAGTTGCCCTG
GTAGGTTCGTTCGTTTGCCGCCAGCTGGCCGGGAAACCCTCTGATTTTCCGCCCTTCCCCCCCCTCCCCCTCCTC
TTCCTGCTTTGAACCGACCTTCGCGCGCGCGCCTGATGCCTCTGACCGCTCCGCTGCCTCCAGACCGCCGACGTC
GTCGACCGTGACCAGCAGCCTACCATCGTTGCCACGTCGCGAGTCGAGTCCAGCGAGGCCGCCATAGATCGGGAC
CCCCACGAGCCCTCTTCCATCATTGCCACCTCGCGCGTCGAGACCGCCGACGCTGTCATGGCCCGAGAATCACGC
GACGGACCGCCCAAACGCCGCATTACCGCCACCTCTTTCTCCCCAACACCCCGTGTCGCCAAAAAGCGGGTTGCC
CGATCTGCACCGATAGCAGCCCTTGATCCCATCGAAAAGCCCGCTCCCAAGGATAGGGAGAGGCAGAAGGCGGGG
CCCCGAAATCAGCGAGACGCCGATGCGGCACACCACAAGAAGGAAAAGGAAAAGGATAAAGACAAGGACAAGGAC
AAGGACAAGGAAAAGGAAACGGAAAAGGAAAAGGACAAGGAAAAGGAGGAAGGAAAAGAAAAGGAGAAGGAGAAA
GACAAGCCCGATGTGGAAGCCAGCGATGCGCAGAAGGGCGACCAACGCGCCCCTCAGGACAGAGACGAATGCTCC
TTCAAGCGCTTCGCCAACCATCGCTGGGTGGGAAACTCGATGGAAATCCGCGTCGAATGGGAGGACGGCGACGTG
ACCTGGGAGCCCGAGGCCAACCTGCATGCCGATGCCCTCGATACCCTTCTGCAGTACTGGTCCAGGCAGGGCGGC
CGGCCGACGAACCCCGTCGCCCCGGATATGTACGACATTTTCGCCATCCGCAAGCACAGCAGGGATCGCCGACGC
CTCTTGGTCGAGTGGGTGGGCTACGGCCCCAACGACGCCTCGTGGGTTTCGCGCTCCGCCGTCGAGGAAACGGCG
CCCGAGGTGGTCAAGGAGTACTGGAGGACTATGGGACGGCGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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