© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2725 |
| Gene name | |
| Location | Contig_167:8219..9378 |
| Strand | + |
| Gene length (bp) | 1159 |
| Transcript length (bp) | 1020 |
| Coding sequence length (bp) | 1020 |
| Protein length (aa) | 340 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01328 | Peroxidase_2 | Peroxidase, family 2 | 1.3E-38 | 39 | 240 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q00668|STCC_EMENI | Putative sterigmatocystin biosynthesis peroxidase stcC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcC PE=3 SV=2 | 36 | 240 | 3.0E-17 |
| sp|P04963|PRXC_LEPFU | Chloroperoxidase OS=Leptoxyphium fumago GN=CPO PE=1 SV=3 | 33 | 239 | 1.0E-14 |
| sp|B9W4V8|APO1_COPRA | Aromatic peroxygenase (Fragments) OS=Coprinellus radians GN=APO PE=1 SV=2 | 44 | 238 | 6.0E-10 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004601 | peroxidase activity | Yes |
| GO:0016491 | oxidoreductase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | No |
| GO:0016209 | antioxidant activity | No |
| GO:0003674 | molecular_function | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.129 | 0.0563 | 0.8055 | 0.0715 | 0.1057 | 0.0491 | 0.3566 | 0.2809 | 0.0942 | 0.0145 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 19 | 0.999532 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 76 | 98 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 10 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2725 MRGSKYLVGLICLPSVALGLIKPISQPVLDLKDKRFLQHRKPGPGDSRSPCPLLNSCANHGFLPRNGRNIDVADI VLGLFLCAGISPELSAIIFAFGIVSSHNALSLRLDLEDLRSHHLVIEHDCSFSRNDDRVGDNNNYQADLWDVAMV HLNHTRKFVDKNKRFINPLKFGRAKAARVTHQKQLNPNSVWGPRAWFNGFSEVGLILSAFGDVPGLARLDYIRSV FEEEKLPYHLGWRPRPFYCNTATMLAVGAASVLGDDKVLKTAAGLILHNPSELLEVFVPPRLDHLPDLENKILDL GFNPKPMKNLSKLLRKVSEKSHFVRSKDFIGPRRNKQKS* |
| Coding | >Hirsu2|2725 ATGAGAGGCTCAAAATACCTTGTCGGCCTCATCTGCCTGCCGTCCGTGGCACTTGGGCTTATCAAGCCCATCTCA CAGCCCGTCCTTGACCTGAAGGATAAGCGATTCCTGCAGCACAGGAAACCGGGGCCCGGCGACTCTCGTAGCCCC TGTCCTCTTCTAAACTCCTGCGCCAACCATGGATTTCTTCCTCGAAACGGGAGGAACATCGATGTCGCGGACATT GTCCTCGGGCTCTTCCTGTGCGCCGGTATCTCACCCGAGCTCAGTGCCATCATCTTTGCGTTCGGCATTGTCTCT AGTCACAATGCGCTCAGTCTGAGACTCGACCTTGAGGACCTCAGGAGTCACCATTTAGTCATTGAGCACGACTGC AGCTTCTCCCGGAACGATGACCGCGTGGGTGACAACAACAACTACCAAGCCGACCTCTGGGATGTCGCTATGGTG CACCTGAACCACACGCGCAAGTTCGTGGACAAGAACAAGAGATTTATCAATCCCCTCAAGTTTGGTCGGGCCAAG GCCGCGCGTGTCACACATCAAAAACAGTTGAACCCCAACTCGGTGTGGGGACCTAGGGCCTGGTTCAATGGCTTT TCCGAGGTCGGCCTTATTCTATCCGCCTTTGGCGATGTCCCTGGCCTAGCCAGGCTCGACTACATCAGGAGCGTC TTCGAAGAGGAGAAGCTTCCGTACCATCTTGGCTGGAGGCCCAGGCCCTTCTACTGCAACACGGCTACCATGTTG GCCGTTGGAGCCGCCTCGGTCCTCGGCGACGACAAGGTTCTGAAGACGGCAGCCGGCCTGATTCTGCACAATCCA TCGGAACTTCTGGAGGTTTTCGTCCCGCCGCGACTGGACCACCTTCCTGACCTGGAGAACAAGATCCTCGACTTG GGTTTCAACCCCAAGCCGATGAAGAATCTCAGTAAACTATTGCGCAAGGTTTCCGAGAAATCACACTTTGTGAGA AGCAAGGATTTCATCGGGCCGAGGAGGAATAAACAGAAGTCTTAG |
| Transcript | >Hirsu2|2725 ATGAGAGGCTCAAAATACCTTGTCGGCCTCATCTGCCTGCCGTCCGTGGCACTTGGGCTTATCAAGCCCATCTCA CAGCCCGTCCTTGACCTGAAGGATAAGCGATTCCTGCAGCACAGGAAACCGGGGCCCGGCGACTCTCGTAGCCCC TGTCCTCTTCTAAACTCCTGCGCCAACCATGGATTTCTTCCTCGAAACGGGAGGAACATCGATGTCGCGGACATT GTCCTCGGGCTCTTCCTGTGCGCCGGTATCTCACCCGAGCTCAGTGCCATCATCTTTGCGTTCGGCATTGTCTCT AGTCACAATGCGCTCAGTCTGAGACTCGACCTTGAGGACCTCAGGAGTCACCATTTAGTCATTGAGCACGACTGC AGCTTCTCCCGGAACGATGACCGCGTGGGTGACAACAACAACTACCAAGCCGACCTCTGGGATGTCGCTATGGTG CACCTGAACCACACGCGCAAGTTCGTGGACAAGAACAAGAGATTTATCAATCCCCTCAAGTTTGGTCGGGCCAAG GCCGCGCGTGTCACACATCAAAAACAGTTGAACCCCAACTCGGTGTGGGGACCTAGGGCCTGGTTCAATGGCTTT TCCGAGGTCGGCCTTATTCTATCCGCCTTTGGCGATGTCCCTGGCCTAGCCAGGCTCGACTACATCAGGAGCGTC TTCGAAGAGGAGAAGCTTCCGTACCATCTTGGCTGGAGGCCCAGGCCCTTCTACTGCAACACGGCTACCATGTTG GCCGTTGGAGCCGCCTCGGTCCTCGGCGACGACAAGGTTCTGAAGACGGCAGCCGGCCTGATTCTGCACAATCCA TCGGAACTTCTGGAGGTTTTCGTCCCGCCGCGACTGGACCACCTTCCTGACCTGGAGAACAAGATCCTCGACTTG GGTTTCAACCCCAAGCCGATGAAGAATCTCAGTAAACTATTGCGCAAGGTTTCCGAGAAATCACACTTTGTGAGA AGCAAGGATTTCATCGGGCCGAGGAGGAATAAACAGAAGTCTTAG |
| Gene | >Hirsu2|2725 ATGAGAGGCTCAAAATACCTTGTCGGCCTCATCTGCCTGCCGTCCGTGGCACTTGGGCTTATCAAGCCCATCTCA CAGCCCGTCCTTGACCTGAAGGATAAGCGATTCCTGCAGCACAGGAAACCGGGGCCCGGCGACTGTAAGAAATGA CCCATCCAACTATCGACCAGATTCCGCGGGCGCTTATGCTGTTCTTCTCCCACAGCTCGTAGCCCCTGTCCTCTT CTAAACTCCTGCGCCAACCATGGATTTCTTCCTCGAAACGGGAGGAACATCGATGTCGCGGACATTGTCCTCGGG CTCTTCCTGTGCGCCGGTATCTCACCCGAGCTCAGTGCCATCATCTTTGCGTTCGGCATTGTCTCTAGTCACAAT GCGCTCAGTCTGAGACTCGACCTTGAGGACCTCAGGAGTCACCATTTAGTCATTGAGCACGACTGCAGCTTCTCC CGGAACGATGACCGCGTGGGTGACAACAACAACTACCAAGCCGACCTCTGGGATGTCGCTATGGTGCACCTGAAC CACACGCGCAAGTTCGTGGACAAGAACAAGAGATTTATCAATCCCCTCAAGTTTGGTCGGGCCAAGGCCGCGCGT GTCACACATCAAAAACAGTTGAACCCCAACTCGGTGTGGGGACCTAGGGCCTGGTTCAATGGCTTTTCCGAGGTC GGCCTTATTCTATCCGCCTTTGGCGATGTCCCTGGCCTAGCCAGGCTCGACTACATCAGGAGCGTCTTCGAAGAG GAGAAGCTTCCGTACCATCTTGGCTGGAGGCCCAGGCCCTTCTACTGCAACACGGCTACCATGTTGGCCGTTGGA GCCGCCTCGGTCCTCGGCGACGACAAGGTTCTGAAGACGGCAGCCGGCCTGATTCTGCACAATCCATCGGTGAGT CAACAAGAAAAAGGCGATGAAGGCATATCGTGCGGTTCAGTCTGAGAAGCTAACGGGTCTCAATCAGGAACTTCT GGAGGTTTTCGTCCCGCCGCGACTGGACCACCTTCCTGACCTGGAGAACAAGATCCTCGACTTGGGTTTCAACCC CAAGCCGATGAAGAATCTCAGTAAACTATTGCGCAAGGTTTCCGAGAAATCACACTTTGTGAGAAGCAAGGATTT CATCGGGCCGAGGAGGAATAAACAGAAGTCTTAG |