© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|270 |
| Gene name | |
| Location | Contig_105:22932..23774 |
| Strand | + |
| Gene length (bp) | 842 |
| Transcript length (bp) | 636 |
| Coding sequence length (bp) | 636 |
| Protein length (aa) | 212 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P36032|MCH2_YEAST | Probable transporter MCH2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MCH2 PE=1 SV=2 | 4 | 206 | 9.0E-07 |
| sp|P53918|ESBP6_YEAST | Uncharacterized transporter ESBP6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ESBP6 PE=1 SV=1 | 22 | 207 | 1.0E-06 |
| sp|A1L1W9|MOT10_DANRE | Monocarboxylate transporter 10 OS=Danio rerio GN=slc16a10 PE=2 SV=1 | 126 | 204 | 1.0E-06 |
| sp|Q8K1P8|MOT8_RAT | Monocarboxylate transporter 8 OS=Rattus norvegicus GN=SLC16A2 PE=1 SV=1 | 13 | 204 | 8.0E-06 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Golgi apparatus | Signal peptide|Transmembrane domain | 0.1372 | 0.0905 | 0.0989 | 0.2285 | 0.2128 | 0.0029 | 0.5142 | 0.451 | 0.5416 | 0.0404 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 40 | 62 | 22 |
| 2 | 75 | 97 | 22 |
| 3 | 117 | 139 | 22 |
| 4 | 144 | 161 | 17 |
| 5 | 171 | 193 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 2180 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|270 MPARDMDLELDDFGSDRARGPESAAGRAELLPPTDRGSGAYLALACCTISQAPIWGYSVSFGIFQEYYSDGRSGI VASAGAFASVGATQMGVMYLMMPLAFVTLYRYPHLRPWCGRIGLVLTVASIAASAFVDSVAGLVATQGVLYALGC GLLFSPMSMYMDEWFVERKGVAYGVMWGGKSAVGVAMPFVFSALLQRFGLRPTLLSCHWDT* |
| Coding | >Hirsu2|270 ATGCCTGCCCGGGACATGGACTTGGAGTTGGACGACTTCGGCTCAGACAGGGCTCGCGGCCCCGAGTCCGCGGCC GGCCGAGCCGAGCTGCTCCCGCCTACGGATCGAGGCTCCGGCGCATACCTTGCCCTGGCATGCTGCACGATCTCG CAAGCTCCCATATGGGGATACTCCGTCTCCTTCGGCATCTTCCAGGAGTACTACAGCGATGGTCGGAGCGGCATC GTGGCCTCGGCCGGCGCCTTCGCCTCCGTCGGCGCAACGCAGATGGGCGTCATGTACCTCATGATGCCCCTGGCC TTCGTGACGCTCTACCGATACCCTCACCTGCGCCCCTGGTGTGGCCGCATCGGCCTGGTGCTGACCGTCGCGAGC ATCGCGGCCTCGGCCTTTGTCGACAGCGTCGCTGGCCTCGTCGCGACCCAGGGCGTGCTGTACGCCCTCGGTTGC GGCTTGCTCTTCAGCCCCATGTCCATGTACATGGACGAGTGGTTCGTGGAGCGCAAGGGCGTCGCCTACGGCGTC ATGTGGGGAGGCAAGTCTGCCGTCGGGGTCGCGATGCCCTTCGTCTTCAGCGCGCTTTTGCAGCGGTTTGGTCTG CGGCCGACGCTTCTGTCCTGTCACTGGGATACCTGA |
| Transcript | >Hirsu2|270 ATGCCTGCCCGGGACATGGACTTGGAGTTGGACGACTTCGGCTCAGACAGGGCTCGCGGCCCCGAGTCCGCGGCC GGCCGAGCCGAGCTGCTCCCGCCTACGGATCGAGGCTCCGGCGCATACCTTGCCCTGGCATGCTGCACGATCTCG CAAGCTCCCATATGGGGATACTCCGTCTCCTTCGGCATCTTCCAGGAGTACTACAGCGATGGTCGGAGCGGCATC GTGGCCTCGGCCGGCGCCTTCGCCTCCGTCGGCGCAACGCAGATGGGCGTCATGTACCTCATGATGCCCCTGGCC TTCGTGACGCTCTACCGATACCCTCACCTGCGCCCCTGGTGTGGCCGCATCGGCCTGGTGCTGACCGTCGCGAGC ATCGCGGCCTCGGCCTTTGTCGACAGCGTCGCTGGCCTCGTCGCGACCCAGGGCGTGCTGTACGCCCTCGGTTGC GGCTTGCTCTTCAGCCCCATGTCCATGTACATGGACGAGTGGTTCGTGGAGCGCAAGGGCGTCGCCTACGGCGTC ATGTGGGGAGGCAAGTCTGCCGTCGGGGTCGCGATGCCCTTCGTCTTCAGCGCGCTTTTGCAGCGGTTTGGTCTG CGGCCGACGCTTCTGTCCTGTCACTGGGATACCTGA |
| Gene | >Hirsu2|270 ATGCCTGCCCGGGACATGGACTTGGAGTTGGACGACTTCGGCTCAGACAGGGCTCGCGGCCCCGAGTCCGCGGCC GGCCGAGCCGAGCTGCTCCCGCCTACGGATCGAGGCTCCGGCGCATACCTTGCCCTGGCATGCTGCACGATCTCG CAAGCTCCCATATGGGGTACAGCCTCCGGACTCGCAGTTGGGGACTGGAGATGCTGACATCAACCGGGCAGGATA CTCCGTCTCCTTCGGCATCTTCCAGGAGTACTACAGCGATGGTCGGAGCGGCATCGTGGCCTCGGCCGGCGCCTT CGCCTCCGTCGGCGCAACGCAGATGGGCGTCATGTACCTCATGATGCCCCTGGCCTTCGTGACGCTCTACCGATA CCCTCACCTGCGCCCCTGGTGTGGCCGCATCGGCCTGGTGCTGACCGTCGCGAGCATCGCGGCCTCGGCCTTTGT CGACAGCGTCGCTGGCCTCGTCGCGACCCAGGGCGTGCTGTACGCCCTCGGTTGCGGCTTGCTCTTCAGCCCCAT GTCCATGTACATGGACGAGTGGTTCGTGGAGCGCAAGGGCGTCGCCTACGGCGTCATGTGGGGAGGCAAGTCTGC CGTCGGGGTCGCGATGCCCTTCGTCTTCAGCGCGCTTTTGCAGCGGTTTGGTCTGCGGCCGACGCTTCTGTCCTG GTCCGTCGGGTCTGCTGTCCTCGCGCTGCCGACGCTCTTCTTCCTTAGGCCGAGGTTGCCCTTGCCCCGGGCTTA TCAGGCCCGTCCGCTGCCGTGGTCCTTCATCCGCCATACGTCCTTCTGGATGATGCAGATTGGCGTCGTTATCCA GTCACTGGGATACCTGA |