Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2692
Gene name
LocationContig_1654:646..2155
Strand-
Gene length (bp)1509
Transcript length (bp)1458
Coding sequence length (bp)1458
Protein length (aa) 486

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16782 SIL1 Nucleotide exchange factor SIL1 1.4E-10 144 319

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q6BTV5|SIL1_DEBHA Nucleotide exchange factor SIL1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=SIL1 PE=3 SV=2 40 313 9.0E-28
sp|Q5A360|SIL1_CANAL Nucleotide exchange factor SIL1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SIL1 PE=3 SV=1 14 231 1.0E-19
sp|Q99158|SIL1_YARLI Nucleotide exchange factor SIL1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SIL1 PE=1 SV=2 52 287 8.0E-16
sp|Q758U2|SIL1_ASHGO Nucleotide exchange factor SIL1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SIL1 PE=3 SV=1 41 294 4.0E-13
sp|Q08199|SIL1_YEAST Nucleotide exchange factor SIL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIL1 PE=1 SV=1 27 243 9.0E-11
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Swissprot ID Swissprot Description Start End E-value
sp|Q6BTV5|SIL1_DEBHA Nucleotide exchange factor SIL1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=SIL1 PE=3 SV=2 40 313 9.0E-28
sp|Q5A360|SIL1_CANAL Nucleotide exchange factor SIL1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SIL1 PE=3 SV=1 14 231 1.0E-19
sp|Q99158|SIL1_YARLI Nucleotide exchange factor SIL1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SIL1 PE=1 SV=2 52 287 8.0E-16
sp|Q758U2|SIL1_ASHGO Nucleotide exchange factor SIL1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SIL1 PE=3 SV=1 41 294 4.0E-13
sp|Q08199|SIL1_YEAST Nucleotide exchange factor SIL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIL1 PE=1 SV=1 27 243 9.0E-11
sp|Q9VBV5|SIL1_DROME Nucleotide exchange factor SIL1 OS=Drosophila melanogaster GN=CG10420 PE=2 SV=1 57 107 6.0E-07
sp|Q6NUA7|SIL1_XENLA Nucleotide exchange factor SIL1 OS=Xenopus laevis GN=sil1 PE=2 SV=1 10 91 2.0E-06
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GO

GO Term Description Terminal node
GO:0005783 endoplasmic reticulum Yes
GO:0000774 adenyl-nucleotide exchange factor activity Yes
GO:0098772 molecular function regulator activity No
GO:0043227 membrane-bounded organelle No
GO:0043226 organelle No
GO:0005488 binding No
GO:0036094 small molecule binding No
GO:0043229 intracellular organelle No
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0030554 adenyl nucleotide binding No
GO:1901265 nucleoside phosphate binding No
GO:0000166 nucleotide binding No
GO:0060590 ATPase regulator activity No
GO:0110165 cellular anatomical entity No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0043231 intracellular membrane-bounded organelle No
GO:0017076 purine nucleotide binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide|Transmembrane domain 0.2109 0.1835 0.3416 0.2045 0.1852 0.0556 0.7564 0.5224 0.563 0.077

SignalP

SignalP signal predicted Location Score
Yes 1 - 32 0.999764

Transmembrane Domains

Domain # Start End Length
1 453 475 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5046
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|887
Ophiocordyceps australis map64 (Brazil) OphauB2|5449
Ophiocordyceps camponoti-floridani Ophcf2|04641
Ophiocordyceps kimflemingae Ophio5|6714
Ophiocordyceps subramaniannii Hirsu2|2692 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2692
MGQGRSNISSSPILRAIVLALFLSFSVTSASAAPPQSPPGEVICSPSDPQDCYPRTFHPTDKFQVVREGQDIPPG
LHVRLNITTGLKEAKINVPGESDSSLNGLPIDGSLVVSPQPDDDGQQTPKGAPAYDPVGKIKKPQQESESFTAAT
KMLREGNLRHNHAVDESLDGLDELSHDMYYGLKIAEDTEVVRALFCLMVSQHVPVSTGSFIPRDLRAASILVGTL
SNNPPARNKVADAWPELRDGHCPKSDLTLGQALFDSLVPTGSKDAADVKKSAASIKAIVPVVNDLLKNDKMRAEF
LAQGGMERLLQVLVLEGHEWAGAQRKVGQLALDNFLDADMGAKLGQWPTAPSLDDRQCRSAGRSPPDGCWDHHVA
RIAEANKHQQGHWSTDLHDKLSAARKASGSGQAPGSPYDSGMAHSSDAESSEEAKDQPDGAGETQHKLSGPGPSP
YYFFYLLLVVTVGVCVLHTLGFSVLGAFRRLLSRR*
Coding >Hirsu2|2692
ATGGGCCAGGGCCGGTCAAACATCAGCTCCTCACCCATCTTGCGGGCCATCGTCTTGGCCCTCTTTCTCTCCTTC
TCCGTCACATCAGCCTCGGCCGCACCTCCTCAGAGCCCCCCCGGAGAAGTCATCTGTTCTCCTTCGGACCCCCAA
GACTGCTATCCCCGGACCTTCCATCCAACGGACAAGTTCCAGGTCGTGCGCGAGGGCCAAGACATCCCCCCCGGA
TTGCACGTGCGGCTCAACATCACGACGGGCCTGAAGGAGGCCAAGATCAACGTCCCCGGCGAGTCGGACTCGTCC
CTCAACGGCCTGCCCATCGACGGGTCGCTTGTTGTTTCCCCCCAGCCGGATGACGACGGCCAACAGACGCCCAAG
GGCGCGCCGGCATACGACCCCGTCGGCAAGATCAAGAAGCCCCAGCAGGAATCCGAGTCCTTCACGGCAGCCACG
AAGATGCTTCGCGAAGGCAACCTTCGCCACAACCATGCCGTCGACGAGTCTCTCGACGGCCTCGACGAGCTCTCT
CACGACATGTACTACGGCTTGAAGATCGCCGAGGACACCGAGGTCGTCCGCGCCCTCTTCTGCCTCATGGTCAGT
CAACACGTGCCCGTGAGCACCGGTAGCTTCATCCCCCGTGACCTGCGCGCCGCCTCCATCCTCGTCGGCACCCTC
TCCAACAACCCCCCGGCCCGGAACAAGGTGGCCGACGCCTGGCCCGAGCTGAGGGACGGCCACTGCCCCAAGAGC
GACCTGACGCTCGGCCAGGCCTTGTTCGACAGCCTCGTCCCGACCGGGAGCAAAGATGCGGCCGACGTCAAGAAG
TCGGCCGCGTCCATCAAGGCCATAGTCCCGGTCGTCAACGACCTCCTCAAGAACGACAAGATGCGGGCCGAATTC
CTCGCCCAGGGCGGCATGGAGCGGCTCCTCCAGGTCTTGGTCCTCGAGGGGCACGAGTGGGCCGGCGCGCAGCGC
AAGGTCGGACAGCTCGCCCTCGACAACTTCCTCGACGCCGACATGGGCGCCAAACTGGGACAGTGGCCCACGGCG
CCGAGTCTGGACGACAGGCAATGCCGGTCGGCCGGGCGCAGCCCCCCGGACGGCTGCTGGGACCACCACGTCGCC
AGGATCGCCGAGGCCAACAAGCACCAGCAGGGCCACTGGAGCACCGACCTGCACGACAAGCTGTCGGCGGCGCGC
AAGGCTTCCGGCTCCGGCCAGGCCCCCGGCAGCCCCTACGACTCGGGCATGGCTCACAGCAGCGACGCCGAGTCC
AGCGAGGAAGCCAAGGACCAACCCGACGGCGCTGGCGAGACGCAGCACAAGCTTTCCGGCCCTGGGCCGTCGCCG
TATTACTTCTTTTACCTTTTGCTGGTCGTGACCGTCGGCGTTTGCGTGCTGCATACCTTGGGGTTTTCGGTGTTG
GGCGCATTCCGCCGCCTGCTGTCGCGTCGTTGA
Transcript >Hirsu2|2692
ATGGGCCAGGGCCGGTCAAACATCAGCTCCTCACCCATCTTGCGGGCCATCGTCTTGGCCCTCTTTCTCTCCTTC
TCCGTCACATCAGCCTCGGCCGCACCTCCTCAGAGCCCCCCCGGAGAAGTCATCTGTTCTCCTTCGGACCCCCAA
GACTGCTATCCCCGGACCTTCCATCCAACGGACAAGTTCCAGGTCGTGCGCGAGGGCCAAGACATCCCCCCCGGA
TTGCACGTGCGGCTCAACATCACGACGGGCCTGAAGGAGGCCAAGATCAACGTCCCCGGCGAGTCGGACTCGTCC
CTCAACGGCCTGCCCATCGACGGGTCGCTTGTTGTTTCCCCCCAGCCGGATGACGACGGCCAACAGACGCCCAAG
GGCGCGCCGGCATACGACCCCGTCGGCAAGATCAAGAAGCCCCAGCAGGAATCCGAGTCCTTCACGGCAGCCACG
AAGATGCTTCGCGAAGGCAACCTTCGCCACAACCATGCCGTCGACGAGTCTCTCGACGGCCTCGACGAGCTCTCT
CACGACATGTACTACGGCTTGAAGATCGCCGAGGACACCGAGGTCGTCCGCGCCCTCTTCTGCCTCATGGTCAGT
CAACACGTGCCCGTGAGCACCGGTAGCTTCATCCCCCGTGACCTGCGCGCCGCCTCCATCCTCGTCGGCACCCTC
TCCAACAACCCCCCGGCCCGGAACAAGGTGGCCGACGCCTGGCCCGAGCTGAGGGACGGCCACTGCCCCAAGAGC
GACCTGACGCTCGGCCAGGCCTTGTTCGACAGCCTCGTCCCGACCGGGAGCAAAGATGCGGCCGACGTCAAGAAG
TCGGCCGCGTCCATCAAGGCCATAGTCCCGGTCGTCAACGACCTCCTCAAGAACGACAAGATGCGGGCCGAATTC
CTCGCCCAGGGCGGCATGGAGCGGCTCCTCCAGGTCTTGGTCCTCGAGGGGCACGAGTGGGCCGGCGCGCAGCGC
AAGGTCGGACAGCTCGCCCTCGACAACTTCCTCGACGCCGACATGGGCGCCAAACTGGGACAGTGGCCCACGGCG
CCGAGTCTGGACGACAGGCAATGCCGGTCGGCCGGGCGCAGCCCCCCGGACGGCTGCTGGGACCACCACGTCGCC
AGGATCGCCGAGGCCAACAAGCACCAGCAGGGCCACTGGAGCACCGACCTGCACGACAAGCTGTCGGCGGCGCGC
AAGGCTTCCGGCTCCGGCCAGGCCCCCGGCAGCCCCTACGACTCGGGCATGGCTCACAGCAGCGACGCCGAGTCC
AGCGAGGAAGCCAAGGACCAACCCGACGGCGCTGGCGAGACGCAGCACAAGCTTTCCGGCCCTGGGCCGTCGCCG
TATTACTTCTTTTACCTTTTGCTGGTCGTGACCGTCGGCGTTTGCGTGCTGCATACCTTGGGGTTTTCGGTGTTG
GGCGCATTCCGCCGCCTGCTGTCGCGTCGTTGA
Gene >Hirsu2|2692
ATGGGCCAGGGCCGGTCAAACATCAGCTCCTCACCCATCTTGCGGGCCATCGTCTTGGCCCTCTTTCTCTCCTTC
TCCGTCACATCAGCCTCGGCCGCACCTCCTCAGAGCCCCCCCGGAGAAGTCATCTGTTCTCCTTCGGACCCCCAA
GACTGCTATCCCCGGACCTTCCATCCAACGGACAAGTTCCAGGTCGTGCGCGAGGGCCAAGACATCCCCCCCGGA
TTGCACGTGCGGCTCAACATCACGACGGGCCTGAAGGAGGCCAAGATCAACGTCCCCGGCGAGTCGGACTCGTCC
CTCAACGGCCTGCCCATCGACGGGTCGCTTGTTGTTTCCCCCCAGCCGGATGACGACGGCCAACAGACGCCCAAG
GGCGCGCCGGCATACGACCCCGTCGGCAAGATCAAGAAGCCCCAGCAGGAATCCGAGTCCTTCACGGCAGCCACG
AAGATGCTTCGCGAAGGCAACCTTCGCCACAACCATGCCGTCGACGAGTCTCTCGACGGCCTCGACGAGCTCTCT
CACGACATGTACTACGGCTTGAAGATCGCCGAGGACACCGAGGTCGTCCGCGCCCTCTTCTGCCTCATGGTCAGT
CAACACGTGCCCGTGAGCACCGGTAGCTTCATCCCCCGTGACCTGCGCGCCGCCTCCATCCTCGTCGGCACCCTC
TCCAACAACCCCCCGGCCCGGAACAAGGTGGCCGACGCCTGGCCCGAGCTGAGGGACGGCCACTGCCCCAAGAGC
GACCTGACGCTCGGCCAGGCCTTGTTCGACAGCCTCGTCCCGACCGGGAGCAAAGATGCGGCCGACGTCAAGAAG
TCGGCCGCGTCCATCAAGGCCATAGTCCCGGTCGTCAACGACCTCCTCAAGAACGACAAGATGCGGGCCGAATTC
CTCGCCCAGGGCGGCATGGAGCGGCTCCTCCAGGTCTTGGTCCTCGAGGGGCACGAGTGGGCCGGCGCGCAGCGC
AAGGTCGGACAGCTCGCCCTCGACAACTTCCTCGACGCCGACATGGGCGCCAAACTGGGACAGTGGCCCACGGCG
CCGAGTCTGGACGACAGGCAATGCCGGTCGGCCGGGCGCAGCCCCCCGGACGGCTGCTGGGACCACCACGTCGCC
AGGATCGCCGAGGCCAACAAGCACCAGCAGGGCCACTGGAGCACCGACCTGCACGACAAGCTGTCGGCGGCGCGC
AAGGCTTCCGGCTCCGGCCAGGCCCCCGGCAGCCCCTACGACTCGGGCATGGCTCACAGCAGCGACGCCGAGTCC
AGCGAGGAAGCCAAGGACCAACCCGACGGCGCTGGCGAGACGCAGCACAAGCTTTCCGGCCCTGGTGAGGCTCCG
CGCCCCGAACTGTAGAAGAGCATGACTGAGTGCAGCTCAGGGCCGTCGCCGTATTACTTCTTTTACCTTTTGCTG
GTCGTGACCGTCGGCGTTTGCGTGCTGCATACCTTGGGGTTTTCGGTGTTGGGCGCATTCCGCCGCCTGCTGTCG
CGTCGTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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