© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|269 |
| Gene name | |
| Location | Contig_105:19794..22043 |
| Strand | + |
| Gene length (bp) | 2249 |
| Transcript length (bp) | 2187 |
| Coding sequence length (bp) | 2187 |
| Protein length (aa) | 729 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00728 | Glyco_hydro_20 | Glycosyl hydrolase family 20, catalytic domain | 9.0E-24 | 182 | 342 |
| PF02838 | Glyco_hydro_20b | Glycosyl hydrolase family 20, domain 2 | 3.8E-07 | 76 | 159 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P49008|HEXA_PORGI | Beta-hexosaminidase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=nahA PE=3 SV=2 | 118 | 300 | 6.0E-17 |
| sp|P96155|HEX1_VIBFU | Beta-hexosaminidase OS=Vibrio furnissii GN=exo I PE=1 SV=1 | 128 | 340 | 2.0E-15 |
| sp|P43077|HEX1_CANAX | Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1 | 84 | 510 | 9.0E-14 |
| sp|Q04786|HEX_VIBVL | Beta-hexosaminidase OS=Vibrio vulnificus GN=hex PE=3 SV=1 | 126 | 293 | 7.0E-13 |
| sp|Q7WUL4|HEX20_CELFI | Beta-N-acetylhexosaminidase OS=Cellulomonas fimi GN=hex20 PE=1 SV=1 | 127 | 416 | 2.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P49008|HEXA_PORGI | Beta-hexosaminidase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=nahA PE=3 SV=2 | 118 | 300 | 6.0E-17 |
| sp|P96155|HEX1_VIBFU | Beta-hexosaminidase OS=Vibrio furnissii GN=exo I PE=1 SV=1 | 128 | 340 | 2.0E-15 |
| sp|P43077|HEX1_CANAX | Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1 | 84 | 510 | 9.0E-14 |
| sp|Q04786|HEX_VIBVL | Beta-hexosaminidase OS=Vibrio vulnificus GN=hex PE=3 SV=1 | 126 | 293 | 7.0E-13 |
| sp|Q7WUL4|HEX20_CELFI | Beta-N-acetylhexosaminidase OS=Cellulomonas fimi GN=hex20 PE=1 SV=1 | 127 | 416 | 2.0E-12 |
| sp|P06865|HEXA_HUMAN | Beta-hexosaminidase subunit alpha OS=Homo sapiens GN=HEXA PE=1 SV=2 | 127 | 512 | 2.0E-11 |
| sp|Q5RC84|HEXA_PONAB | Beta-hexosaminidase subunit alpha OS=Pongo abelii GN=HEXA PE=3 SV=1 | 127 | 512 | 3.0E-11 |
| sp|P13723|HEXA1_DICDI | Beta-hexosaminidase subunit A1 OS=Dictyostelium discoideum GN=hexa1 PE=1 SV=1 | 127 | 340 | 5.0E-10 |
| sp|D4AYT4|HEX2_ARTBC | Probable beta-hexosaminidase ARB_01353 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01353 PE=1 SV=1 | 127 | 514 | 7.0E-10 |
| sp|Q8L7S6|HEXO3_ARATH | Beta-hexosaminidase 3 OS=Arabidopsis thaliana GN=HEXO3 PE=1 SV=1 | 175 | 340 | 2.0E-09 |
| sp|A7WM73|HEXO1_ARATH | Beta-hexosaminidase 1 OS=Arabidopsis thaliana GN=HEXO1 PE=1 SV=1 | 175 | 288 | 5.0E-09 |
| sp|Q0V8R6|HEXA_BOVIN | Beta-hexosaminidase subunit alpha OS=Bos taurus GN=HEXA PE=2 SV=1 | 127 | 526 | 9.0E-09 |
| sp|Q86M34|HEXB_ENTHI | Beta-hexosaminidase subunit beta OS=Entamoeba histolytica GN=HEXB PE=1 SV=1 | 88 | 287 | 9.0E-09 |
| sp|E9DFH0|HEX1_COCPS | Beta-hexosaminidase 1 OS=Coccidioides posadasii (strain RMSCC 757 / Silveira) GN=HEX1 PE=1 SV=1 | 125 | 513 | 1.0E-08 |
| sp|P29416|HEXA_MOUSE | Beta-hexosaminidase subunit alpha OS=Mus musculus GN=Hexa PE=1 SV=2 | 127 | 526 | 6.0E-08 |
| sp|Q641X3|HEXA_RAT | Beta-hexosaminidase subunit alpha OS=Rattus norvegicus GN=Hexa PE=2 SV=1 | 127 | 526 | 9.0E-08 |
| sp|Q8WSF3|FDL_DROME | Probable beta-hexosaminidase fdl OS=Drosophila melanogaster GN=fdl PE=1 SV=1 | 127 | 300 | 6.0E-07 |
| sp|P49007|HEXB_PSEO7 | Beta-hexosaminidase B OS=Pseudoalteromonas piscicida GN=nag096 PE=3 SV=1 | 110 | 288 | 8.0E-07 |
| sp|P49614|HEXB_FELCA | Beta-hexosaminidase subunit beta OS=Felis catus GN=HEXB PE=2 SV=2 | 125 | 288 | 3.0E-06 |
| sp|P07686|HEXB_HUMAN | Beta-hexosaminidase subunit beta OS=Homo sapiens GN=HEXB PE=1 SV=3 | 175 | 362 | 4.0E-06 |
| sp|Q54K56|HEXB2_DICDI | Beta-hexosaminidase subunit B2 OS=Dictyostelium discoideum GN=hexb2 PE=3 SV=1 | 175 | 311 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|269 MKADFLLAVVATPLIAFWGHENGLASANLLGIPSVPYRETEPKWFELSKLEGIRVDARYASARDEDGATLIPPTL RDFAATFADDLQTVFGIRTGVIESDGAGIDSIFLTLGDKSSYTDAAGRPTSEGYSLTSNESGIFITGASPLGVWW GTRTVLQQAALRKDAPGLPYGSGDDMPAWGERGMMLDAGRHYYPKDFLVELCSYMSFFKQNIFHLHLSDNLFVNR AYSRQQALRLDAWFRLWSDNAELSGLNTRRNESYTRADFEDIQARCAARGVTVIPEIEAPGHALPIVQWRPQLGL PSDLSLLNISHPETIPTMKMIWREFLPWFHSKTVSIGADEYTGPVRDYNRLVNAMDDFIREESGKSIRIWGTFPP RTTPGYNNIHKDVSIQHWKFAEDNPYRDYIRNNYSVVNSNGDFYVVAKWGGYPNAIDIAKTFHGDPAVKGGGLWY PNMFSQEKASDNPPRHEPLVLGAIAPLWNDFGSNATVYSEAYYAWRQGIPALADKHWGGNLSRQQFDSVFPQLHP FVPAQNLDRRIPSRGDVIFEYDLGQGVESYGKVVKDRSPNGYDATTNCESQGSSLLITPDCSLQTPWSSKGRDYS LSLQLKIDELPGTTNTTLVAGSDSVLMLTPGITLLASGNYYRLKSTVPLRNWVELSIRGRGAQTFASVRPLSQKT PAKEEEFRTKMGINGRSFHWDVMAIEAPIKEVTGWKGELRRFRLTNRGTGGHA* |
| Coding | >Hirsu2|269 ATGAAGGCCGACTTCCTACTAGCGGTCGTAGCGACGCCGCTTATCGCCTTCTGGGGCCACGAGAACGGTCTTGCC TCGGCAAACCTCCTCGGGATACCCTCTGTGCCCTACCGTGAAACGGAGCCAAAGTGGTTCGAACTGTCAAAGCTC GAGGGCATCAGAGTTGATGCTCGGTATGCCTCGGCTCGAGACGAGGATGGAGCCACGCTGATCCCCCCTACCCTG CGTGACTTCGCCGCCACATTTGCCGACGACTTACAGACCGTCTTCGGCATCCGGACTGGGGTCATAGAAAGCGAT GGCGCGGGGATAGACAGCATATTTCTGACCTTGGGCGACAAGTCGTCCTACACAGACGCCGCCGGCCGCCCCACG TCCGAGGGCTACAGCCTGACGTCGAACGAGTCCGGCATCTTCATCACCGGAGCCAGCCCGCTCGGCGTCTGGTGG GGCACCCGGACCGTCCTGCAGCAGGCGGCCCTGCGAAAGGATGCCCCTGGCCTGCCGTACGGCTCGGGCGACGAC ATGCCGGCCTGGGGCGAGCGCGGCATGATGCTCGACGCCGGCCGGCACTACTACCCCAAGGACTTCCTCGTCGAG CTGTGCTCCTACATGTCCTTCTTCAAGCAGAACATCTTCCACCTGCACCTCAGCGACAACCTCTTTGTCAACCGG GCCTACTCGCGGCAGCAGGCGCTCCGGCTCGACGCCTGGTTCCGGCTCTGGTCCGACAACGCCGAGCTCAGCGGC CTAAACACGCGCCGCAACGAGTCGTACACGCGCGCCGACTTTGAAGACATCCAGGCCCGCTGTGCCGCCCGCGGC GTGACCGTCATCCCCGAGATCGAGGCGCCCGGGCACGCGCTGCCCATCGTGCAGTGGCGGCCCCAGCTCGGCCTG CCCAGCGACCTGAGCCTCCTCAACATCTCCCATCCGGAGACTATACCGACCATGAAAATGATCTGGCGGGAGTTC CTGCCCTGGTTCCACTCCAAGACGGTCTCTATCGGAGCAGATGAGTACACGGGGCCCGTCCGGGACTACAACCGG CTCGTCAACGCCATGGACGACTTCATCCGGGAGGAGTCGGGCAAATCGATCCGTATCTGGGGCACCTTCCCGCCT CGCACTACCCCAGGATACAACAACATACACAAAGACGTGTCGATCCAGCATTGGAAGTTCGCCGAGGACAATCCG TACCGCGACTACATCCGCAACAACTACTCGGTCGTGAACTCCAACGGGGACTTCTACGTCGTCGCCAAGTGGGGA GGGTATCCCAATGCCATAGACATCGCCAAGACGTTCCATGGCGATCCCGCCGTCAAGGGCGGCGGCCTCTGGTAT CCCAACATGTTCAGCCAGGAGAAGGCATCGGATAACCCGCCGCGCCACGAGCCTCTGGTCCTCGGTGCCATCGCG CCGCTCTGGAACGACTTCGGCTCCAACGCCACCGTCTACTCCGAGGCCTACTACGCCTGGCGCCAAGGTATACCG GCTTTGGCGGACAAACACTGGGGCGGGAACTTGAGCCGGCAGCAGTTCGACAGCGTCTTCCCCCAGCTGCACCCG TTCGTCCCGGCACAAAATCTCGACCGGAGGATTCCATCCAGGGGAGACGTCATCTTCGAATACGATCTGGGGCAA GGCGTCGAGTCTTACGGAAAAGTAGTGAAAGACAGGTCGCCCAACGGATACGATGCCACGACGAATTGCGAGTCG CAGGGCTCGTCCCTGCTCATTACGCCGGACTGCTCGCTGCAGACTCCGTGGTCGTCCAAGGGAAGGGACTACTCT CTCTCCTTGCAGCTCAAGATTGACGAGCTACCGGGAACCACGAACACAACACTCGTGGCTGGGTCGGACTCCGTT TTGATGCTGACTCCGGGCATCACCCTCTTGGCGTCTGGGAACTACTATCGGCTGAAAAGCACCGTGCCCCTGAGA AATTGGGTTGAGCTGAGCATACGAGGACGGGGAGCTCAGACATTTGCTTCAGTCAGGCCGCTTAGCCAGAAGACA CCTGCGAAAGAGGAGGAGTTCCGCACAAAGATGGGCATCAATGGGCGAAGTTTCCACTGGGACGTCATGGCTATC GAGGCGCCAATCAAGGAGGTCACGGGCTGGAAAGGCGAGCTACGAAGATTCCGCCTAACTAACCGCGGCACCGGA GGACATGCTTGA |
| Transcript | >Hirsu2|269 ATGAAGGCCGACTTCCTACTAGCGGTCGTAGCGACGCCGCTTATCGCCTTCTGGGGCCACGAGAACGGTCTTGCC TCGGCAAACCTCCTCGGGATACCCTCTGTGCCCTACCGTGAAACGGAGCCAAAGTGGTTCGAACTGTCAAAGCTC GAGGGCATCAGAGTTGATGCTCGGTATGCCTCGGCTCGAGACGAGGATGGAGCCACGCTGATCCCCCCTACCCTG CGTGACTTCGCCGCCACATTTGCCGACGACTTACAGACCGTCTTCGGCATCCGGACTGGGGTCATAGAAAGCGAT GGCGCGGGGATAGACAGCATATTTCTGACCTTGGGCGACAAGTCGTCCTACACAGACGCCGCCGGCCGCCCCACG TCCGAGGGCTACAGCCTGACGTCGAACGAGTCCGGCATCTTCATCACCGGAGCCAGCCCGCTCGGCGTCTGGTGG GGCACCCGGACCGTCCTGCAGCAGGCGGCCCTGCGAAAGGATGCCCCTGGCCTGCCGTACGGCTCGGGCGACGAC ATGCCGGCCTGGGGCGAGCGCGGCATGATGCTCGACGCCGGCCGGCACTACTACCCCAAGGACTTCCTCGTCGAG CTGTGCTCCTACATGTCCTTCTTCAAGCAGAACATCTTCCACCTGCACCTCAGCGACAACCTCTTTGTCAACCGG GCCTACTCGCGGCAGCAGGCGCTCCGGCTCGACGCCTGGTTCCGGCTCTGGTCCGACAACGCCGAGCTCAGCGGC CTAAACACGCGCCGCAACGAGTCGTACACGCGCGCCGACTTTGAAGACATCCAGGCCCGCTGTGCCGCCCGCGGC GTGACCGTCATCCCCGAGATCGAGGCGCCCGGGCACGCGCTGCCCATCGTGCAGTGGCGGCCCCAGCTCGGCCTG CCCAGCGACCTGAGCCTCCTCAACATCTCCCATCCGGAGACTATACCGACCATGAAAATGATCTGGCGGGAGTTC CTGCCCTGGTTCCACTCCAAGACGGTCTCTATCGGAGCAGATGAGTACACGGGGCCCGTCCGGGACTACAACCGG CTCGTCAACGCCATGGACGACTTCATCCGGGAGGAGTCGGGCAAATCGATCCGTATCTGGGGCACCTTCCCGCCT CGCACTACCCCAGGATACAACAACATACACAAAGACGTGTCGATCCAGCATTGGAAGTTCGCCGAGGACAATCCG TACCGCGACTACATCCGCAACAACTACTCGGTCGTGAACTCCAACGGGGACTTCTACGTCGTCGCCAAGTGGGGA GGGTATCCCAATGCCATAGACATCGCCAAGACGTTCCATGGCGATCCCGCCGTCAAGGGCGGCGGCCTCTGGTAT CCCAACATGTTCAGCCAGGAGAAGGCATCGGATAACCCGCCGCGCCACGAGCCTCTGGTCCTCGGTGCCATCGCG CCGCTCTGGAACGACTTCGGCTCCAACGCCACCGTCTACTCCGAGGCCTACTACGCCTGGCGCCAAGGTATACCG GCTTTGGCGGACAAACACTGGGGCGGGAACTTGAGCCGGCAGCAGTTCGACAGCGTCTTCCCCCAGCTGCACCCG TTCGTCCCGGCACAAAATCTCGACCGGAGGATTCCATCCAGGGGAGACGTCATCTTCGAATACGATCTGGGGCAA GGCGTCGAGTCTTACGGAAAAGTAGTGAAAGACAGGTCGCCCAACGGATACGATGCCACGACGAATTGCGAGTCG CAGGGCTCGTCCCTGCTCATTACGCCGGACTGCTCGCTGCAGACTCCGTGGTCGTCCAAGGGAAGGGACTACTCT CTCTCCTTGCAGCTCAAGATTGACGAGCTACCGGGAACCACGAACACAACACTCGTGGCTGGGTCGGACTCCGTT TTGATGCTGACTCCGGGCATCACCCTCTTGGCGTCTGGGAACTACTATCGGCTGAAAAGCACCGTGCCCCTGAGA AATTGGGTTGAGCTGAGCATACGAGGACGGGGAGCTCAGACATTTGCTTCAGTCAGGCCGCTTAGCCAGAAGACA CCTGCGAAAGAGGAGGAGTTCCGCACAAAGATGGGCATCAATGGGCGAAGTTTCCACTGGGACGTCATGGCTATC GAGGCGCCAATCAAGGAGGTCACGGGCTGGAAAGGCGAGCTACGAAGATTCCGCCTAACTAACCGCGGCACCGGA GGACATGCTTGA |
| Gene | >Hirsu2|269 ATGAAGGCCGACTTCCTACTAGCGGTCGTAGCGACGCCGCTTATCGCCTTCTGGGGCCACGAGAACGGTAGGCCA AGACACCGATTGCTCTACAGACCCGTCCGGCTCAGTCACTTGTCTCATTCGCAGGTCTTGCCTCGGCAAACCTCC TCGGGATACCCTCTGTGCCCTACCGTGAAACGGAGCCAAAGTGGTTCGAACTGTCAAAGCTCGAGGGCATCAGAG TTGATGCTCGGTATGCCTCGGCTCGAGACGAGGATGGAGCCACGCTGATCCCCCCTACCCTGCGTGACTTCGCCG CCACATTTGCCGACGACTTACAGACCGTCTTCGGCATCCGGACTGGGGTCATAGAAAGCGATGGCGCGGGGATAG ACAGCATATTTCTGACCTTGGGCGACAAGTCGTCCTACACAGACGCCGCCGGCCGCCCCACGTCCGAGGGCTACA GCCTGACGTCGAACGAGTCCGGCATCTTCATCACCGGAGCCAGCCCGCTCGGCGTCTGGTGGGGCACCCGGACCG TCCTGCAGCAGGCGGCCCTGCGAAAGGATGCCCCTGGCCTGCCGTACGGCTCGGGCGACGACATGCCGGCCTGGG GCGAGCGCGGCATGATGCTCGACGCCGGCCGGCACTACTACCCCAAGGACTTCCTCGTCGAGCTGTGCTCCTACA TGTCCTTCTTCAAGCAGAACATCTTCCACCTGCACCTCAGCGACAACCTCTTTGTCAACCGGGCCTACTCGCGGC AGCAGGCGCTCCGGCTCGACGCCTGGTTCCGGCTCTGGTCCGACAACGCCGAGCTCAGCGGCCTAAACACGCGCC GCAACGAGTCGTACACGCGCGCCGACTTTGAAGACATCCAGGCCCGCTGTGCCGCCCGCGGCGTGACCGTCATCC CCGAGATCGAGGCGCCCGGGCACGCGCTGCCCATCGTGCAGTGGCGGCCCCAGCTCGGCCTGCCCAGCGACCTGA GCCTCCTCAACATCTCCCATCCGGAGACTATACCGACCATGAAAATGATCTGGCGGGAGTTCCTGCCCTGGTTCC ACTCCAAGACGGTCTCTATCGGAGCAGATGAGTACACGGGGCCCGTCCGGGACTACAACCGGCTCGTCAACGCCA TGGACGACTTCATCCGGGAGGAGTCGGGCAAATCGATCCGTATCTGGGGCACCTTCCCGCCTCGCACTACCCCAG GATACAACAACATACACAAAGACGTGTCGATCCAGCATTGGAAGTTCGCCGAGGACAATCCGTACCGCGACTACA TCCGCAACAACTACTCGGTCGTGAACTCCAACGGGGACTTCTACGTCGTCGCCAAGTGGGGAGGGTATCCCAATG CCATAGACATCGCCAAGACGTTCCATGGCGATCCCGCCGTCAAGGGCGGCGGCCTCTGGTATCCCAACATGTTCA GCCAGGAGAAGGCATCGGATAACCCGCCGCGCCACGAGCCTCTGGTCCTCGGTGCCATCGCGCCGCTCTGGAACG ACTTCGGCTCCAACGCCACCGTCTACTCCGAGGCCTACTACGCCTGGCGCCAAGGTATACCGGCTTTGGCGGACA AACACTGGGGCGGGAACTTGAGCCGGCAGCAGTTCGACAGCGTCTTCCCCCAGCTGCACCCGTTCGTCCCGGCAC AAAATCTCGACCGGAGGATTCCATCCAGGGGAGACGTCATCTTCGAATACGATCTGGGGCAAGGCGTCGAGTCTT ACGGAAAAGTAGTGAAAGACAGGTCGCCCAACGGATACGATGCCACGACGAATTGCGAGTCGCAGGGCTCGTCCC TGCTCATTACGCCGGACTGCTCGCTGCAGACTCCGTGGTCGTCCAAGGGAAGGGACTACTCTCTCTCCTTGCAGC TCAAGATTGACGAGCTACCGGGAACCACGAACACAACACTCGTGGCTGGGTCGGACTCCGTTTTGATGCTGACTC CGGGCATCACCCTCTTGGCGTCTGGGAACTACTATCGGCTGAAAAGCACCGTGCCCCTGAGAAATTGGGTTGAGC TGAGCATACGAGGACGGGGAGCTCAGACATTTGCTTCAGTCAGGCCGCTTAGCCAGAAGACACCTGCGAAAGAGG AGGAGTTCCGCACAAAGATGGGCATCAATGGGCGAAGTTTCCACTGGGACGTCATGGCTATCGAGGCGCCAATCA AGGAGGTCACGGGCTGGAAAGGCGAGCTACGAAGATTCCGCCTAACTAACCGCGGCACCGGAGGACATGCTTGA |