Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2670
Gene name
LocationContig_1647:4806..5473
Strand+
Gene length (bp)667
Transcript length (bp)582
Coding sequence length (bp)582
Protein length (aa) 194

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0957 0.0673 0.9694 0.1469 0.0562 0.0226 0.1657 0.1057 0.1589 0.0015

SignalP

SignalP signal predicted Location Score
Yes 1 - 21 0.99935

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2164
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6489
Ophiocordyceps australis map64 (Brazil) OphauB2|7800
Ophiocordyceps camponoti-floridani Ophcf2|07374
Ophiocordyceps camponoti-rufipedis Ophun1|3216
Ophiocordyceps kimflemingae Ophio5|5147
Ophiocordyceps subramaniannii Hirsu2|2670 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2670
MSSVGSRVLWAAAGAATLVSATPFPRDLVHDVVDGFSHLLLARGNDCGAGAGLCGANNQYCCGPGQVCTTVAGNV
ATCVAGAAPGAGLYGLYTTTWTETRTYTSTIMTHWAPAPEPTAGVDCVPPSAEQQACGPICCAGWQTCAFQGQCS
IRPGYAEPSTVLVTRPAPRPRPRAPATPPPGLSAPTAAPTAAA*
Coding >Hirsu2|2670
ATGAGCAGCGTCGGCAGCCGCGTGCTGTGGGCCGCCGCCGGCGCCGCCACGCTCGTCTCGGCCACGCCCTTCCCC
AGGGACCTGGTGCACGACGTCGTCGACGGCTTCTCGCACCTGCTGCTGGCGCGCGGCAACGACTGCGGCGCCGGC
GCCGGCCTCTGCGGCGCCAACAACCAGTACTGCTGCGGGCCGGGCCAGGTGTGCACGACGGTGGCGGGCAACGTG
GCGACGTGCGTGGCCGGGGCGGCGCCCGGCGCCGGCCTGTACGGCCTCTACACGACGACCTGGACCGAGACGCGC
ACCTACACCAGCACCATCATGACGCACTGGGCGCCGGCGCCGGAGCCGACGGCCGGCGTCGACTGCGTGCCGCCC
AGCGCCGAGCAGCAGGCGTGCGGGCCCATCTGCTGCGCCGGCTGGCAGACGTGCGCCTTCCAGGGCCAGTGCTCG
ATCCGGCCCGGCTACGCCGAGCCGTCGACGGTTCTCGTCACCCGGCCAGCGCCCCGGCCGAGGCCACGCGCACCG
GCGACGCCGCCGCCGGGGCTATCGGCGCCGACGGCGGCACCAACGGCGGCGGCCTGA
Transcript >Hirsu2|2670
ATGAGCAGCGTCGGCAGCCGCGTGCTGTGGGCCGCCGCCGGCGCCGCCACGCTCGTCTCGGCCACGCCCTTCCCC
AGGGACCTGGTGCACGACGTCGTCGACGGCTTCTCGCACCTGCTGCTGGCGCGCGGCAACGACTGCGGCGCCGGC
GCCGGCCTCTGCGGCGCCAACAACCAGTACTGCTGCGGGCCGGGCCAGGTGTGCACGACGGTGGCGGGCAACGTG
GCGACGTGCGTGGCCGGGGCGGCGCCCGGCGCCGGCCTGTACGGCCTCTACACGACGACCTGGACCGAGACGCGC
ACCTACACCAGCACCATCATGACGCACTGGGCGCCGGCGCCGGAGCCGACGGCCGGCGTCGACTGCGTGCCGCCC
AGCGCCGAGCAGCAGGCGTGCGGGCCCATCTGCTGCGCCGGCTGGCAGACGTGCGCCTTCCAGGGCCAGTGCTCG
ATCCGGCCCGGCTACGCCGAGCCGTCGACGGTTCTCGTCACCCGGCCAGCGCCCCGGCCGAGGCCACGCGCACCG
GCGACGCCGCCGCCGGGGCTATCGGCGCCGACGGCGGCACCAACGGCGGCGGCCTGA
Gene >Hirsu2|2670
ATGAGCAGCGTCGGCAGCCGCGTGCTGTGGGCCGCCGCCGGCGCCGCCACGCTCGTCTCGGCCACGCCCTTCCCC
AGGGACCTGGTGCACGACGTCGTCGACGGCTTCTCGCACCTGCTGCTGGCGCGCGGCAACGACTGCGGCGCCGGC
GCCGGCCTCTGCGGCGCCAACAACCAGTACTGCTGCGGGCCGGGCCAGGTGTGCACGACGGTGGCGGGCAACGTG
GCGACGTGCGTGGCCGGGGCGGCGCCCGGCGCCGGCCTGTACGGCCTCTACACGACGACCTGGACCGAGACGCGC
ACCTACACCAGCACCATCATGACGCACTGGGCGCCGGCGCCGGAGCCGACGGCCGGCGTCGACTGCGTGCCGCCC
AGCGCCGAGCAGCAGGCGTGCGGGCCCATCTGCTGCGCCGGCTGGCAGACGTGCGCCTTCCAGGGCCAGTGCTCG
ATCCGGCCCGGCTACGCCGAGCCGTCGACGGTTCTCGTCACGTCGGACGGCAAGGTGACGACGCGCTACTCGGCC
CCCTTCCGCGTCACCGGCACCGTCACCATCACCAACGTCGGCACCGGCCAGCCGGCCAGCGCCCCGGCCGAGGCC
ACGCGCACCGGCGACGCCGCCGCCGGGGCTATCGGCGCCGACGGCGGCACCAACGGCGGCGGCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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