© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|266 |
| Gene name | |
| Location | Contig_105:8780..10546 |
| Strand | - |
| Gene length (bp) | 1766 |
| Transcript length (bp) | 1434 |
| Coding sequence length (bp) | 1434 |
| Protein length (aa) | 478 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03663 | Glyco_hydro_76 | Glycosyl hydrolase family 76 | 8.7E-150 | 45 | 421 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P36091|DCW1_YEAST | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCW1 PE=1 SV=1 | 22 | 473 | 2.0E-109 |
| sp|Q75DG6|DCW1_ASHGO | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCW1 PE=3 SV=2 | 32 | 475 | 7.0E-106 |
| sp|Q5AD78|DCW1_CANAL | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DCW1 PE=1 SV=1 | 45 | 475 | 2.0E-105 |
| sp|Q05031|DFG5_YEAST | Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DFG5 PE=1 SV=1 | 56 | 473 | 1.0E-102 |
| sp|Q6FLP9|DCW1_CANGA | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DCW1 PE=3 SV=1 | 39 | 452 | 6.0E-102 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P36091|DCW1_YEAST | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCW1 PE=1 SV=1 | 22 | 473 | 2.0E-109 |
| sp|Q75DG6|DCW1_ASHGO | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCW1 PE=3 SV=2 | 32 | 475 | 7.0E-106 |
| sp|Q5AD78|DCW1_CANAL | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DCW1 PE=1 SV=1 | 45 | 475 | 2.0E-105 |
| sp|Q05031|DFG5_YEAST | Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DFG5 PE=1 SV=1 | 56 | 473 | 1.0E-102 |
| sp|Q6FLP9|DCW1_CANGA | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DCW1 PE=3 SV=1 | 39 | 452 | 6.0E-102 |
| sp|Q5ACZ2|DFG5_CANAL | Mannan endo-1,6-alpha-mannosidase DFG5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DFG5 PE=1 SV=1 | 38 | 473 | 3.0E-95 |
| sp|O74556|YCZ2_SCHPO | Putative mannan endo-1,6-alpha-mannosidase C970.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC970.02 PE=3 SV=1 | 32 | 434 | 5.0E-91 |
| sp|Q9P6I3|YHG7_SCHPO | Putative mannan endo-1,6-alpha-mannosidase C1198.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1198.07c PE=3 SV=2 | 41 | 460 | 2.0E-86 |
| sp|Q9P6I4|YHG6_SCHPO | Putative mannan endo-1,6-alpha-mannosidase C1198.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1198.06c PE=3 SV=1 | 82 | 472 | 7.0E-73 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Signal peptide | 0.0782 | 0.0766 | 0.446 | 0.4236 | 0.1282 | 0.0208 | 0.4479 | 0.3829 | 0.3674 | 0.0112 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 28 | 0.999298 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 454 | 476 | 22 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GH76 | 7.1E-108 | 41 | 414 |
| Orthofinder run ID | 4 |
| Orthogroup | 7 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|266 MFPSSPPSLSRAWPLVMAGSLLLGGTGAQAPGPASTYKIDTPDNIRESASTLAYDLMLLYPGNKTGGIPGTLPGP PPAGPYYWWEGGAMMGTYIDYWHLTGDSSYNKVVMEGMLHQVGDKENYMPANHTMSLGNDDQGFWGMSAMLAAEN KFPNPPDDKPQWLALAQAVWNTQADPSRHDTTCGGGLRWQIPFANAGYNYKNTIANGCFFNIGARLARYTKNATY AEWADKTWDWLWGVHFIDHESWRVYDGAHVEANCTDINKATFSYNIGVLLQGAAFMYNFTEGDRKWADRVDKLTE RILADFFPKKIAFEVPCEVRKGACSPDMLSFKGYVHRWLSVVTQVAPFTRDKILPVLRTSTEAAVKQCTGGETGR MCGFYWSEGVFIDPGVDHTSGAGETMNVLAAVSSLLIDGNGGPVTNATGGISKGNPNAGGGRDNGERAPRPITGG DRAGAGILTFLLLGSAVGTFVWMSLFE* |
| Coding | >Hirsu2|266 ATGTTTCCCTCGTCACCTCCAAGCCTGTCCCGGGCATGGCCACTGGTTATGGCTGGAAGCCTGCTCTTGGGCGGC ACTGGGGCCCAGGCACCGGGGCCGGCCTCGACATACAAGATCGATACTCCCGATAACATCCGCGAGTCGGCCAGC ACCTTGGCCTACGACCTGATGCTCCTGTACCCGGGCAACAAGACGGGCGGCATCCCGGGCACCCTGCCTGGCCCG CCCCCGGCCGGACCATACTACTGGTGGGAAGGCGGCGCCATGATGGGCACCTACATCGACTACTGGCACCTGACG GGCGATTCCAGCTACAACAAGGTCGTCATGGAGGGCATGCTGCACCAGGTCGGCGACAAGGAGAACTACATGCCC GCCAACCACACCATGTCGCTCGGCAACGACGATCAAGGCTTCTGGGGCATGTCCGCCATGCTGGCCGCCGAGAAC AAGTTCCCTAATCCGCCCGACGATAAGCCCCAGTGGCTGGCCCTGGCCCAAGCCGTCTGGAATACCCAGGCTGAT CCCAGCCGCCACGATACCACCTGCGGCGGCGGACTACGCTGGCAGATTCCCTTCGCCAACGCCGGATACAACTAC AAGAACACCATCGCCAACGGGTGTTTCTTCAATATCGGGGCACGACTGGCGCGCTATACCAAGAACGCGACATAT GCCGAATGGGCCGACAAGACGTGGGACTGGCTCTGGGGCGTTCACTTCATCGACCACGAGTCGTGGCGCGTCTAC GACGGCGCCCACGTCGAGGCAAACTGCACCGACATCAACAAGGCCACCTTCTCCTACAACATTGGCGTCTTGCTG CAAGGCGCGGCATTCATGTACAACTTTACGGAGGGTGACAGGAAATGGGCCGACCGCGTGGACAAGTTGACAGAG CGAATCCTTGCCGACTTCTTCCCCAAAAAAATCGCGTTCGAGGTGCCCTGCGAGGTCCGTAAGGGCGCGTGCTCG CCCGATATGCTCTCCTTCAAGGGCTACGTCCATCGCTGGCTGTCGGTCGTCACGCAGGTCGCGCCCTTTACCCGC GACAAGATCCTCCCGGTGCTGCGCACCTCGACCGAGGCGGCCGTCAAGCAGTGCACGGGCGGGGAAACGGGCCGC ATGTGCGGCTTCTACTGGAGCGAGGGCGTCTTCATCGACCCGGGCGTCGACCACACGTCGGGCGCAGGCGAGACC ATGAACGTGCTGGCGGCCGTGTCGAGCCTGCTCATCGACGGGAACGGCGGCCCCGTCACCAACGCGACGGGCGGC ATCTCCAAGGGGAACCCCAATGCCGGCGGAGGCCGCGACAACGGCGAGAGGGCGCCCCGCCCCATCACGGGCGGC GACCGTGCCGGCGCCGGCATCCTGACCTTTTTGCTGCTCGGCAGCGCCGTCGGCACCTTTGTCTGGATGAGCTTG TTCGAGTAA |
| Transcript | >Hirsu2|266 ATGTTTCCCTCGTCACCTCCAAGCCTGTCCCGGGCATGGCCACTGGTTATGGCTGGAAGCCTGCTCTTGGGCGGC ACTGGGGCCCAGGCACCGGGGCCGGCCTCGACATACAAGATCGATACTCCCGATAACATCCGCGAGTCGGCCAGC ACCTTGGCCTACGACCTGATGCTCCTGTACCCGGGCAACAAGACGGGCGGCATCCCGGGCACCCTGCCTGGCCCG CCCCCGGCCGGACCATACTACTGGTGGGAAGGCGGCGCCATGATGGGCACCTACATCGACTACTGGCACCTGACG GGCGATTCCAGCTACAACAAGGTCGTCATGGAGGGCATGCTGCACCAGGTCGGCGACAAGGAGAACTACATGCCC GCCAACCACACCATGTCGCTCGGCAACGACGATCAAGGCTTCTGGGGCATGTCCGCCATGCTGGCCGCCGAGAAC AAGTTCCCTAATCCGCCCGACGATAAGCCCCAGTGGCTGGCCCTGGCCCAAGCCGTCTGGAATACCCAGGCTGAT CCCAGCCGCCACGATACCACCTGCGGCGGCGGACTACGCTGGCAGATTCCCTTCGCCAACGCCGGATACAACTAC AAGAACACCATCGCCAACGGGTGTTTCTTCAATATCGGGGCACGACTGGCGCGCTATACCAAGAACGCGACATAT GCCGAATGGGCCGACAAGACGTGGGACTGGCTCTGGGGCGTTCACTTCATCGACCACGAGTCGTGGCGCGTCTAC GACGGCGCCCACGTCGAGGCAAACTGCACCGACATCAACAAGGCCACCTTCTCCTACAACATTGGCGTCTTGCTG CAAGGCGCGGCATTCATGTACAACTTTACGGAGGGTGACAGGAAATGGGCCGACCGCGTGGACAAGTTGACAGAG CGAATCCTTGCCGACTTCTTCCCCAAAAAAATCGCGTTCGAGGTGCCCTGCGAGGTCCGTAAGGGCGCGTGCTCG CCCGATATGCTCTCCTTCAAGGGCTACGTCCATCGCTGGCTGTCGGTCGTCACGCAGGTCGCGCCCTTTACCCGC GACAAGATCCTCCCGGTGCTGCGCACCTCGACCGAGGCGGCCGTCAAGCAGTGCACGGGCGGGGAAACGGGCCGC ATGTGCGGCTTCTACTGGAGCGAGGGCGTCTTCATCGACCCGGGCGTCGACCACACGTCGGGCGCAGGCGAGACC ATGAACGTGCTGGCGGCCGTGTCGAGCCTGCTCATCGACGGGAACGGCGGCCCCGTCACCAACGCGACGGGCGGC ATCTCCAAGGGGAACCCCAATGCCGGCGGAGGCCGCGACAACGGCGAGAGGGCGCCCCGCCCCATCACGGGCGGC GACCGTGCCGGCGCCGGCATCCTGACCTTTTTGCTGCTCGGCAGCGCCGTCGGCACCTTTGTCTGGATGAGCTTG TTCGAGTAA |
| Gene | >Hirsu2|266 ATGTTTCCCTCGTCACCTCCAAGCCTGTCCCGGGCATGGCCACTGGTTATGGCTGGAAGCCTGCTCTTGGGCGGC ACTGGGGCCCAGGCACCGGGGCCGGCCTCGACATACAAGATCGATACTCCCGGTACGAGCCTCCCTTTCCCGTCT TGCGCCACTCGCTTCTCTTTCTCTCTCCTCCTCTTCCGTAGACCCGAGAAGCAGAGACAGGCCGACTAACTCACC CTGCGCGGCGCCCGGAACAGATAACATCCGCGAGTCGGCCAGCACCTTGGCCTACGACCTGATGCTCCTGTACCC GGGCAACAAGACGGGCGGCATCCCGGGCACCCTGCCTGGCCCGCCCCCGGCCGGACCATACTACTGGTGGGAAGG CGGCGCCATGATGGGCACCTACATCGACTACTGGCACCTGACGGGCGATTCCAGCTACAACAAGGTCGTCATGGA GGGCATGCTGCACCAGGTCGGCGACAAGGAGAACTACATGCCCGCCAACCACACCATGTCGCTCGGCAACGACGA TCAAGGCTTCTGGGGCATGTCCGCCATGCTGGCCGCCGAGAACAAGTTCCCTAATCCGCCCGACGATAAGCCCCA GTGGCTGGCCCTGGCCCAAGCCGTCTGGAATACCCAGGCTGATCCCAGCCGCCACGATACCACCTGCGGCGGCGG ACTACGCTGGCAGATTCCCTTCGCCAACGCCGGATACAACTACAAGAACAGTATGCCGCTGCCAGTTTAAGCCCT ACCCCCCTTTCTCGCTGCTCGCGGCTCTGGGCGTTCCTCCAACGTCGCCCATGACGGCTAACACGCGCGTCCCCT TCCTCCTCTAGCCATCGCCAACGGGTGTTTCTTCAATATCGGGGCACGACTGGCGCGCTATACCAAGAACGCGAC ATATGCCGAATGGGCCGACAAGACGTGGGACTGGCTCTGGGGCGTTCACTTCATCGACCACGAGTCGTGGCGCGT CTACGACGGCGCCCACGTCGAGGCAAACTGCACCGACATCAACAAGGCCACCTTCTCCTACAACATTGGCGTCTT GCTGCAAGGCGCGGCATTCATGTACAACTTTGTAAGTCTCGCTCTCTGCGCCCCCTGGCCACGGCTTCAACAAGA CCACGCCAGCGACCCAAAGTTTTCGCGGCCATACCGCTGACAACTTGGATCCGCCACAGACGGAGGGTGACAGGA AATGGGCCGACCGCGTGGACAAGTTGACAGAGCGAATCCTTGCCGACTTCTTCCCCAAAAAAATCGCGTTCGAGG TGCCCTGCGAGGTCCGTAAGGGCGCGTGCTCGCCCGATATGCTCTCCTTCAAGGGCTACGTCCATCGCTGGCTGT CGGTCGTCACGCAGGTCGCGCCCTTTACCCGCGACAAGATCCTCCCGGTGCTGCGCACCTCGACCGAGGCGGCCG TCAAGCAGTGCACGGGCGGGGAAACGGGCCGCATGTGCGGCTTCTACTGGAGCGAGGGCGTCTTCATCGACCCGG GCGTCGACCACACGTCGGGCGCAGGCGAGACCATGAACGTGCTGGCGGCCGTGTCGAGCCTGCTCATCGACGGGA ACGGCGGCCCCGTCACCAACGCGACGGGCGGCATCTCCAAGGGGAACCCCAATGCCGGCGGAGGCCGCGACAACG GCGAGAGGGCGCCCCGCCCCATCACGGGCGGCGACCGTGCCGGCGCCGGCATCCTGACCTTTTTGCTGCTCGGCA GCGCCGTCGGCACCTTTGTCTGGATGAGCTTGTTCGAGTAA |