© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2651 |
| Gene name | |
| Location | Contig_164:22582..23551 |
| Strand | - |
| Gene length (bp) | 969 |
| Transcript length (bp) | 969 |
| Coding sequence length (bp) | 969 |
| Protein length (aa) | 323 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0962 | 0.0784 | 0.9763 | 0.0681 | 0.0528 | 0.0091 | 0.0702 | 0.03 | 0.064 | 0.0007 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 19 | 0.999596 |
| Orthofinder run ID | 4 |
| Orthogroup | 9130 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2651 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2651 MKLSAATALAVYFSAGALAAPGQMKGANVGTPKHDRRGELSMNRESGATPPKQDKAHSSEAAPGAPKPISKRCEA LNYDVQEVERRGLSCSGKTRAIAARSESAGPPAKDPKLDIVPPSEVNTKMTNPSSPSTRSKFTAGFAGAERESQS LGAPKNRMANITGGSADSRLAENPPKNRMTHLNESPSTNMKLAQEGDDDSESSDSDDMGTSSKMTSFGDSAANRR MTNLTNSRSTSMKLVQEGDDDSESSDSDDVGASSKMTSFGNPATKSKLATERGGSPGSKMWEKRIANVKDAPVNS KLVAQAEGGDKTKGSDKKSESG* |
| Coding | >Hirsu2|2651 ATGAAGCTGTCTGCTGCAACTGCCCTGGCCGTTTACTTCTCCGCAGGCGCGCTTGCTGCGCCAGGACAGATGAAA GGTGCCAATGTTGGAACTCCGAAGCACGACAGGCGTGGCGAACTCTCGATGAACCGGGAGTCGGGGGCTACGCCG CCGAAGCAGGACAAGGCCCACAGCAGCGAAGCTGCCCCTGGCGCCCCCAAGCCCATATCAAAACGCTGCGAAGCC TTAAACTACGATGTTCAGGAAGTGGAAAGGAGAGGCCTGAGCTGCTCAGGCAAGACTCGAGCCATCGCGGCACGA AGCGAGTCCGCCGGCCCCCCCGCAAAAGATCCGAAATTAGACATCGTCCCACCTTCCGAGGTGAATACCAAGATG ACGAATCCGAGCAGCCCGTCGACACGTTCGAAGTTCACTGCGGGATTTGCCGGGGCCGAGCGAGAATCCCAATCT CTGGGCGCGCCGAAGAACAGAATGGCAAACATCACCGGCGGCTCGGCCGACTCGAGGCTGGCTGAGAACCCACCG AAGAACAGGATGACCCATCTGAACGAGTCCCCCTCGACCAACATGAAGCTCGCCCAGGAAGGTGACGACGACTCG GAGTCTTCCGATTCCGATGACATGGGAACCAGCAGCAAGATGACCAGCTTTGGCGATTCTGCGGCCAATAGACGA ATGACCAATCTGACCAACTCCCGTTCGACCAGCATGAAGCTCGTCCAGGAAGGCGACGATGACTCGGAATCTTCC GATTCCGATGACGTGGGAGCCAGCAGCAAGATGACTAGCTTTGGCAACCCTGCGACCAAGTCAAAGCTTGCCACG GAAAGGGGCGGCTCGCCTGGCTCCAAAATGTGGGAAAAGAGAATTGCGAACGTCAAAGATGCTCCAGTGAACTCG AAGCTGGTTGCGCAGGCCGAGGGGGGCGACAAGACGAAGGGCTCGGATAAAAAGTCGGAGTCGGGTTAG |
| Transcript | >Hirsu2|2651 ATGAAGCTGTCTGCTGCAACTGCCCTGGCCGTTTACTTCTCCGCAGGCGCGCTTGCTGCGCCAGGACAGATGAAA GGTGCCAATGTTGGAACTCCGAAGCACGACAGGCGTGGCGAACTCTCGATGAACCGGGAGTCGGGGGCTACGCCG CCGAAGCAGGACAAGGCCCACAGCAGCGAAGCTGCCCCTGGCGCCCCCAAGCCCATATCAAAACGCTGCGAAGCC TTAAACTACGATGTTCAGGAAGTGGAAAGGAGAGGCCTGAGCTGCTCAGGCAAGACTCGAGCCATCGCGGCACGA AGCGAGTCCGCCGGCCCCCCCGCAAAAGATCCGAAATTAGACATCGTCCCACCTTCCGAGGTGAATACCAAGATG ACGAATCCGAGCAGCCCGTCGACACGTTCGAAGTTCACTGCGGGATTTGCCGGGGCCGAGCGAGAATCCCAATCT CTGGGCGCGCCGAAGAACAGAATGGCAAACATCACCGGCGGCTCGGCCGACTCGAGGCTGGCTGAGAACCCACCG AAGAACAGGATGACCCATCTGAACGAGTCCCCCTCGACCAACATGAAGCTCGCCCAGGAAGGTGACGACGACTCG GAGTCTTCCGATTCCGATGACATGGGAACCAGCAGCAAGATGACCAGCTTTGGCGATTCTGCGGCCAATAGACGA ATGACCAATCTGACCAACTCCCGTTCGACCAGCATGAAGCTCGTCCAGGAAGGCGACGATGACTCGGAATCTTCC GATTCCGATGACGTGGGAGCCAGCAGCAAGATGACTAGCTTTGGCAACCCTGCGACCAAGTCAAAGCTTGCCACG GAAAGGGGCGGCTCGCCTGGCTCCAAAATGTGGGAAAAGAGAATTGCGAACGTCAAAGATGCTCCAGTGAACTCG AAGCTGGTTGCGCAGGCCGAGGGGGGCGACAAGACGAAGGGCTCGGATAAAAAGTCGGAGTCGGGTTAG |
| Gene | >Hirsu2|2651 ATGAAGCTGTCTGCTGCAACTGCCCTGGCCGTTTACTTCTCCGCAGGCGCGCTTGCTGCGCCAGGACAGATGAAA GGTGCCAATGTTGGAACTCCGAAGCACGACAGGCGTGGCGAACTCTCGATGAACCGGGAGTCGGGGGCTACGCCG CCGAAGCAGGACAAGGCCCACAGCAGCGAAGCTGCCCCTGGCGCCCCCAAGCCCATATCAAAACGCTGCGAAGCC TTAAACTACGATGTTCAGGAAGTGGAAAGGAGAGGCCTGAGCTGCTCAGGCAAGACTCGAGCCATCGCGGCACGA AGCGAGTCCGCCGGCCCCCCCGCAAAAGATCCGAAATTAGACATCGTCCCACCTTCCGAGGTGAATACCAAGATG ACGAATCCGAGCAGCCCGTCGACACGTTCGAAGTTCACTGCGGGATTTGCCGGGGCCGAGCGAGAATCCCAATCT CTGGGCGCGCCGAAGAACAGAATGGCAAACATCACCGGCGGCTCGGCCGACTCGAGGCTGGCTGAGAACCCACCG AAGAACAGGATGACCCATCTGAACGAGTCCCCCTCGACCAACATGAAGCTCGCCCAGGAAGGTGACGACGACTCG GAGTCTTCCGATTCCGATGACATGGGAACCAGCAGCAAGATGACCAGCTTTGGCGATTCTGCGGCCAATAGACGA ATGACCAATCTGACCAACTCCCGTTCGACCAGCATGAAGCTCGTCCAGGAAGGCGACGATGACTCGGAATCTTCC GATTCCGATGACGTGGGAGCCAGCAGCAAGATGACTAGCTTTGGCAACCCTGCGACCAAGTCAAAGCTTGCCACG GAAAGGGGCGGCTCGCCTGGCTCCAAAATGTGGGAAAAGAGAATTGCGAACGTCAAAGATGCTCCAGTGAACTCG AAGCTGGTTGCGCAGGCCGAGGGGGGCGACAAGACGAAGGGCTCGGATAAAAAGTCGGAGTCGGGTTAG |