Protein ID | Hirsu2|265 |
Gene name | |
Location | Contig_105:5398..7264 |
Strand | - |
Gene length (bp) | 1866 |
Transcript length (bp) | 1866 |
Coding sequence length (bp) | 1866 |
Protein length (aa) | 622 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF20150 | 2EXR | 2EXR family | 1.2E-10 | 72 | 173 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.2736 | 0.9156 | 0.0884 | 0.0568 | 0.0746 | 0.0061 | 0.018 | 0.029 | 0.0129 | 0.0036 |
Orthofinder run ID | 4 |
Orthogroup | 2156 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|265 MRRTVVSSSSDTSDSDSDASTSSLDEADPPRARAFLDLEAMEESCSDDDDDDDDDDDSDGDSVGSHGGGGKFEQF MQLPPELRARIWDIFCPHLVTRARLLRINITLVGHPIECDWAASDGFALGDQTEALRRVMAVHRESRQLARRLFP DTLTLGRGADAPLVHFNKTQDVILAQFLDIDPFGFSNPLPSLSEDVLNAAVHTWSNDREGNFPGQFNRILGLFPN MKRLYFWRFDNRINTCDLRWITSDCVHQNRIETWEKAPGLGEDTESFACWPKVDRHPDFAKVHVPRSLLQDMPEY VKDQLEGRGIEAWPLVLFEFSSGVKRYHHLHLTKDGSCPDDVCDDMFLDDGSPDFGALDWYFHHPALDFLQDDYE SSGIDDGPLDSDSASTTTSTSTTTSSSSSPLPPGEHTAPIAVWSSPEPETDEAESDQEEDQPAEAPRRPPKRRIV DDSDDDEEGDDAPRQPATKRARLARPIAADSDDDETDASSAGARNTSARPRRRLAGTLSDSESSGSGHGAPNTSR GAADSDSGSSKQRSTTPPRMSLAERLELHRQAHPVSSSSGDDGVSSPSGDDEDIAGEDEDEDEDEDEDEDEDEDG LVDRMASESDGESDGTEEGDW* |
Coding | >Hirsu2|265 ATGAGGCGCACCGTCGTGTCCTCGAGCAGCGACACGTCCGACAGCGACAGCGACGCGTCGACGTCGAGCCTGGAC GAGGCCGACCCCCCTCGTGCGCGCGCCTTTCTCGACCTCGAAGCCATGGAGGAGTCTTGCTCCGACGACGACGAC GACGACGACGACGACGACGATAGCGACGGCGACAGTGTCGGCAGCCATGGCGGCGGAGGCAAGTTCGAGCAATTC ATGCAGCTGCCGCCCGAGCTTCGCGCCCGCATCTGGGACATCTTCTGCCCCCACCTCGTCACCCGGGCACGCCTG CTCAGGATCAACATCACACTCGTCGGGCACCCGATCGAATGCGACTGGGCGGCCAGCGACGGCTTCGCCCTCGGC GACCAGACCGAGGCCCTGCGCCGTGTCATGGCCGTCCACCGAGAGTCGCGACAGCTGGCGCGCCGCCTCTTCCCG GACACGCTCACCCTCGGCCGTGGTGCCGACGCGCCCCTTGTCCACTTTAACAAGACCCAGGACGTCATCCTCGCC CAGTTTCTCGATATTGATCCTTTCGGCTTCTCAAACCCCTTGCCTAGCTTATCTGAAGACGTTCTCAACGCTGCC GTCCACACGTGGAGCAACGATCGCGAGGGCAACTTCCCCGGCCAGTTCAACCGGATCTTGGGCCTCTTCCCCAAC ATGAAGCGCTTATATTTCTGGCGGTTTGACAACCGCATCAATACGTGTGATCTCCGCTGGATCACCTCCGACTGT GTCCACCAGAACCGAATCGAGACGTGGGAGAAGGCGCCCGGTCTGGGCGAGGATACCGAGTCCTTCGCCTGCTGG CCCAAGGTGGACCGCCACCCCGACTTTGCCAAAGTGCACGTCCCCCGAAGCCTCCTGCAAGACATGCCCGAATAC GTCAAGGACCAGCTGGAGGGCCGCGGCATCGAGGCCTGGCCCCTGGTCTTGTTCGAATTCTCCTCGGGCGTCAAA CGATATCATCACTTGCATCTCACCAAGGACGGGAGCTGCCCCGACGACGTCTGCGACGACATGTTCTTGGACGAT GGCTCCCCCGACTTTGGGGCTCTGGACTGGTATTTCCATCATCCCGCGCTCGACTTCCTCCAGGACGACTACGAA AGCTCCGGCATCGATGACGGCCCGCTTGATTCTGACTCGGCTTCTACCACCACCTCCACCAGCACCACAACCTCC TCCTCCTCCTCCCCCCTTCCGCCGGGAGAACACACGGCTCCGATCGCAGTCTGGAGCAGTCCAGAGCCAGAAACG GACGAGGCGGAATCGGACCAAGAAGAAGACCAGCCGGCAGAAGCCCCCCGTCGCCCGCCGAAGCGCAGGATCGTC GACGACTCCGACGACGACGAGGAGGGCGACGACGCGCCCCGCCAGCCGGCGACCAAGCGCGCCCGGCTGGCGCGC CCCATCGCCGCCGACTCCGACGACGATGAGACGGACGCGTCCTCGGCCGGCGCCCGAAACACAAGCGCCCGGCCC CGCCGTAGGCTCGCCGGCACCCTGTCCGACTCGGAGTCGTCGGGCAGCGGCCACGGCGCGCCGAATACGTCTCGC GGAGCCGCAGACTCGGACTCAGGCTCCTCGAAGCAGAGGTCCACGACGCCGCCACGCATGTCGCTGGCGGAGCGG CTCGAGCTCCACCGCCAAGCCCATCCCGTCTCCTCGTCCAGCGGCGACGACGGCGTCTCCTCCCCGAGCGGAGAC GACGAGGACATTGCAGGGGAGGACGAGGATGAGGACGAGGACGAGGACGAGGACGAGGACGAGGACGAGGACGGG CTAGTGGACCGAATGGCCTCTGAGTCGGATGGCGAGAGTGATGGGACGGAAGAGGGGGATTGGTGA |
Transcript | >Hirsu2|265 ATGAGGCGCACCGTCGTGTCCTCGAGCAGCGACACGTCCGACAGCGACAGCGACGCGTCGACGTCGAGCCTGGAC GAGGCCGACCCCCCTCGTGCGCGCGCCTTTCTCGACCTCGAAGCCATGGAGGAGTCTTGCTCCGACGACGACGAC GACGACGACGACGACGACGATAGCGACGGCGACAGTGTCGGCAGCCATGGCGGCGGAGGCAAGTTCGAGCAATTC ATGCAGCTGCCGCCCGAGCTTCGCGCCCGCATCTGGGACATCTTCTGCCCCCACCTCGTCACCCGGGCACGCCTG CTCAGGATCAACATCACACTCGTCGGGCACCCGATCGAATGCGACTGGGCGGCCAGCGACGGCTTCGCCCTCGGC GACCAGACCGAGGCCCTGCGCCGTGTCATGGCCGTCCACCGAGAGTCGCGACAGCTGGCGCGCCGCCTCTTCCCG GACACGCTCACCCTCGGCCGTGGTGCCGACGCGCCCCTTGTCCACTTTAACAAGACCCAGGACGTCATCCTCGCC CAGTTTCTCGATATTGATCCTTTCGGCTTCTCAAACCCCTTGCCTAGCTTATCTGAAGACGTTCTCAACGCTGCC GTCCACACGTGGAGCAACGATCGCGAGGGCAACTTCCCCGGCCAGTTCAACCGGATCTTGGGCCTCTTCCCCAAC ATGAAGCGCTTATATTTCTGGCGGTTTGACAACCGCATCAATACGTGTGATCTCCGCTGGATCACCTCCGACTGT GTCCACCAGAACCGAATCGAGACGTGGGAGAAGGCGCCCGGTCTGGGCGAGGATACCGAGTCCTTCGCCTGCTGG CCCAAGGTGGACCGCCACCCCGACTTTGCCAAAGTGCACGTCCCCCGAAGCCTCCTGCAAGACATGCCCGAATAC GTCAAGGACCAGCTGGAGGGCCGCGGCATCGAGGCCTGGCCCCTGGTCTTGTTCGAATTCTCCTCGGGCGTCAAA CGATATCATCACTTGCATCTCACCAAGGACGGGAGCTGCCCCGACGACGTCTGCGACGACATGTTCTTGGACGAT GGCTCCCCCGACTTTGGGGCTCTGGACTGGTATTTCCATCATCCCGCGCTCGACTTCCTCCAGGACGACTACGAA AGCTCCGGCATCGATGACGGCCCGCTTGATTCTGACTCGGCTTCTACCACCACCTCCACCAGCACCACAACCTCC TCCTCCTCCTCCCCCCTTCCGCCGGGAGAACACACGGCTCCGATCGCAGTCTGGAGCAGTCCAGAGCCAGAAACG GACGAGGCGGAATCGGACCAAGAAGAAGACCAGCCGGCAGAAGCCCCCCGTCGCCCGCCGAAGCGCAGGATCGTC GACGACTCCGACGACGACGAGGAGGGCGACGACGCGCCCCGCCAGCCGGCGACCAAGCGCGCCCGGCTGGCGCGC CCCATCGCCGCCGACTCCGACGACGATGAGACGGACGCGTCCTCGGCCGGCGCCCGAAACACAAGCGCCCGGCCC CGCCGTAGGCTCGCCGGCACCCTGTCCGACTCGGAGTCGTCGGGCAGCGGCCACGGCGCGCCGAATACGTCTCGC GGAGCCGCAGACTCGGACTCAGGCTCCTCGAAGCAGAGGTCCACGACGCCGCCACGCATGTCGCTGGCGGAGCGG CTCGAGCTCCACCGCCAAGCCCATCCCGTCTCCTCGTCCAGCGGCGACGACGGCGTCTCCTCCCCGAGCGGAGAC GACGAGGACATTGCAGGGGAGGACGAGGATGAGGACGAGGACGAGGACGAGGACGAGGACGAGGACGAGGACGGG CTAGTGGACCGAATGGCCTCTGAGTCGGATGGCGAGAGTGATGGGACGGAAGAGGGGGATTGGTGA |
Gene | >Hirsu2|265 ATGAGGCGCACCGTCGTGTCCTCGAGCAGCGACACGTCCGACAGCGACAGCGACGCGTCGACGTCGAGCCTGGAC GAGGCCGACCCCCCTCGTGCGCGCGCCTTTCTCGACCTCGAAGCCATGGAGGAGTCTTGCTCCGACGACGACGAC GACGACGACGACGACGACGATAGCGACGGCGACAGTGTCGGCAGCCATGGCGGCGGAGGCAAGTTCGAGCAATTC ATGCAGCTGCCGCCCGAGCTTCGCGCCCGCATCTGGGACATCTTCTGCCCCCACCTCGTCACCCGGGCACGCCTG CTCAGGATCAACATCACACTCGTCGGGCACCCGATCGAATGCGACTGGGCGGCCAGCGACGGCTTCGCCCTCGGC GACCAGACCGAGGCCCTGCGCCGTGTCATGGCCGTCCACCGAGAGTCGCGACAGCTGGCGCGCCGCCTCTTCCCG GACACGCTCACCCTCGGCCGTGGTGCCGACGCGCCCCTTGTCCACTTTAACAAGACCCAGGACGTCATCCTCGCC CAGTTTCTCGATATTGATCCTTTCGGCTTCTCAAACCCCTTGCCTAGCTTATCTGAAGACGTTCTCAACGCTGCC GTCCACACGTGGAGCAACGATCGCGAGGGCAACTTCCCCGGCCAGTTCAACCGGATCTTGGGCCTCTTCCCCAAC ATGAAGCGCTTATATTTCTGGCGGTTTGACAACCGCATCAATACGTGTGATCTCCGCTGGATCACCTCCGACTGT GTCCACCAGAACCGAATCGAGACGTGGGAGAAGGCGCCCGGTCTGGGCGAGGATACCGAGTCCTTCGCCTGCTGG CCCAAGGTGGACCGCCACCCCGACTTTGCCAAAGTGCACGTCCCCCGAAGCCTCCTGCAAGACATGCCCGAATAC GTCAAGGACCAGCTGGAGGGCCGCGGCATCGAGGCCTGGCCCCTGGTCTTGTTCGAATTCTCCTCGGGCGTCAAA CGATATCATCACTTGCATCTCACCAAGGACGGGAGCTGCCCCGACGACGTCTGCGACGACATGTTCTTGGACGAT GGCTCCCCCGACTTTGGGGCTCTGGACTGGTATTTCCATCATCCCGCGCTCGACTTCCTCCAGGACGACTACGAA AGCTCCGGCATCGATGACGGCCCGCTTGATTCTGACTCGGCTTCTACCACCACCTCCACCAGCACCACAACCTCC TCCTCCTCCTCCCCCCTTCCGCCGGGAGAACACACGGCTCCGATCGCAGTCTGGAGCAGTCCAGAGCCAGAAACG GACGAGGCGGAATCGGACCAAGAAGAAGACCAGCCGGCAGAAGCCCCCCGTCGCCCGCCGAAGCGCAGGATCGTC GACGACTCCGACGACGACGAGGAGGGCGACGACGCGCCCCGCCAGCCGGCGACCAAGCGCGCCCGGCTGGCGCGC CCCATCGCCGCCGACTCCGACGACGATGAGACGGACGCGTCCTCGGCCGGCGCCCGAAACACAAGCGCCCGGCCC CGCCGTAGGCTCGCCGGCACCCTGTCCGACTCGGAGTCGTCGGGCAGCGGCCACGGCGCGCCGAATACGTCTCGC GGAGCCGCAGACTCGGACTCAGGCTCCTCGAAGCAGAGGTCCACGACGCCGCCACGCATGTCGCTGGCGGAGCGG CTCGAGCTCCACCGCCAAGCCCATCCCGTCTCCTCGTCCAGCGGCGACGACGGCGTCTCCTCCCCGAGCGGAGAC GACGAGGACATTGCAGGGGAGGACGAGGATGAGGACGAGGACGAGGACGAGGACGAGGACGAGGACGAGGACGGG CTAGTGGACCGAATGGCCTCTGAGTCGGATGGCGAGAGTGATGGGACGGAAGAGGGGGATTGGTGA |