Protein ID | Hirsu2|2643 |
Gene name | |
Location | Contig_164:3286..4831 |
Strand | + |
Gene length (bp) | 1545 |
Transcript length (bp) | 1449 |
Coding sequence length (bp) | 1449 |
Protein length (aa) | 483 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11710 | Git3 | G protein-coupled glucose receptor regulating Gpa2 | 7.5E-18 | 20 | 271 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 23 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 23 | 45 | 22 |
2 | 116 | 138 | 22 |
3 | 158 | 180 | 22 |
4 | 193 | 215 | 22 |
5 | 246 | 268 | 22 |
6 | 293 | 315 | 22 |
7 | 320 | 342 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2643 MAWGELKADGQSLSPLTPDLRRGLIAITVLALVSFATSTILFLYLTYKLVVWRFLVPPEQKQQQGELERRPSHAT SDFRLGIDGIFTDGDPSRLDVAVSRQEDRRRRSKTPPPNQFLVLIYNLLLADMHQSLAFLLNASWLRADGIMART PTCFVQGMLVSTGDLSSSMFISTIAVHTYLSVVRNCRPSHRTFFAVILGNWAFVYAISLLPVAVTRNGAERGGFF VRAGAWCWMNRDYEQLRLATHYFFIFLALGVTSALYVGIFVSLRRQRALARRCVIAASQPLPRHEPAFLIYPLIY VMCTLPLALGRIATMAGRQVPLGYFCFAGAIIAFNGSFDCLLFGTTRNAIIFGSPSDLSADDTGLKTFGFLKTPS TRRYGNMIWIQGGGRRRRQEDKVAGGWCSWERLGNGRRHNTSPWPANGASSDTSQEFIRGAAIQMDMVTSVVVEM NGEKNHRTLPPCSKALSATASETGTEMSSLKS* |
Coding | >Hirsu2|2643 ATGGCGTGGGGAGAGCTGAAGGCCGACGGTCAAAGTCTCAGCCCTCTGACGCCGGACCTGCGACGAGGACTGATC GCCATCACCGTGCTGGCGCTCGTGTCCTTCGCCACCTCGACGATCCTGTTCCTCTACTTGACCTACAAGCTCGTC GTCTGGCGCTTCCTCGTCCCGCCGGAGCAGAAGCAGCAGCAGGGCGAGCTCGAGCGCAGGCCGTCGCACGCGACC TCGGACTTCAGGCTCGGCATCGATGGCATCTTCACCGACGGCGACCCGTCCCGGCTCGACGTGGCGGTGTCTCGG CAGGAGGACAGGCGCCGACGGAGCAAGACTCCGCCGCCGAATCAGTTCCTCGTCCTCATCTACAACCTCCTCCTG GCCGACATGCACCAGAGCCTGGCCTTCCTCCTCAACGCGTCATGGCTGCGAGCCGACGGCATCATGGCACGGACG CCGACGTGCTTCGTGCAGGGCATGTTGGTCTCGACGGGCGACCTGTCGTCGAGCATGTTCATCAGCACCATCGCC GTCCACACCTACCTCTCCGTCGTCCGGAACTGCCGGCCCTCTCACCGAACCTTTTTCGCCGTCATCCTCGGTAAC TGGGCCTTCGTCTACGCCATATCCCTGCTGCCCGTGGCTGTGACGCGCAACGGCGCCGAGCGCGGTGGCTTCTTC GTTCGCGCCGGCGCCTGGTGCTGGATGAATCGAGACTACGAGCAGCTTCGCCTCGCGACTCACTACTTCTTCATC TTCCTCGCGTTGGGCGTCACGTCAGCGCTGTACGTCGGTATCTTTGTCTCTCTCCGCCGCCAACGGGCTCTGGCA CGCCGATGCGTCATCGCCGCCAGCCAGCCGCTGCCGAGGCACGAGCCGGCCTTTCTCATCTACCCGCTCATCTAC GTCATGTGCACCCTCCCCCTTGCCCTTGGCCGGATCGCCACCATGGCCGGCAGGCAGGTGCCGCTCGGATACTTT TGTTTTGCCGGCGCCATCATCGCCTTCAACGGGTCCTTCGACTGCCTGCTGTTCGGCACGACGCGCAACGCCATC ATCTTCGGCTCCCCGTCGGACCTCTCCGCCGACGACACGGGCCTGAAGACCTTTGGGTTCCTGAAGACGCCGTCG ACGAGGCGCTACGGCAACATGATCTGGATCCAGGGCGGCGGGAGGAGGCGGAGGCAAGAGGACAAGGTCGCGGGC GGCTGGTGCTCATGGGAGCGCCTGGGGAACGGGCGCCGGCACAACACGAGTCCCTGGCCTGCGAACGGCGCCTCG TCGGATACGAGCCAGGAGTTCATCAGGGGGGCCGCGATCCAGATGGACATGGTGACGAGCGTTGTGGTGGAGATG AACGGTGAAAAGAATCACCGCACACTGCCGCCCTGCAGCAAGGCTTTGAGTGCCACGGCGTCAGAGACGGGCACG GAGATGTCGTCGTTGAAATCCTAG |
Transcript | >Hirsu2|2643 ATGGCGTGGGGAGAGCTGAAGGCCGACGGTCAAAGTCTCAGCCCTCTGACGCCGGACCTGCGACGAGGACTGATC GCCATCACCGTGCTGGCGCTCGTGTCCTTCGCCACCTCGACGATCCTGTTCCTCTACTTGACCTACAAGCTCGTC GTCTGGCGCTTCCTCGTCCCGCCGGAGCAGAAGCAGCAGCAGGGCGAGCTCGAGCGCAGGCCGTCGCACGCGACC TCGGACTTCAGGCTCGGCATCGATGGCATCTTCACCGACGGCGACCCGTCCCGGCTCGACGTGGCGGTGTCTCGG CAGGAGGACAGGCGCCGACGGAGCAAGACTCCGCCGCCGAATCAGTTCCTCGTCCTCATCTACAACCTCCTCCTG GCCGACATGCACCAGAGCCTGGCCTTCCTCCTCAACGCGTCATGGCTGCGAGCCGACGGCATCATGGCACGGACG CCGACGTGCTTCGTGCAGGGCATGTTGGTCTCGACGGGCGACCTGTCGTCGAGCATGTTCATCAGCACCATCGCC GTCCACACCTACCTCTCCGTCGTCCGGAACTGCCGGCCCTCTCACCGAACCTTTTTCGCCGTCATCCTCGGTAAC TGGGCCTTCGTCTACGCCATATCCCTGCTGCCCGTGGCTGTGACGCGCAACGGCGCCGAGCGCGGTGGCTTCTTC GTTCGCGCCGGCGCCTGGTGCTGGATGAATCGAGACTACGAGCAGCTTCGCCTCGCGACTCACTACTTCTTCATC TTCCTCGCGTTGGGCGTCACGTCAGCGCTGTACGTCGGTATCTTTGTCTCTCTCCGCCGCCAACGGGCTCTGGCA CGCCGATGCGTCATCGCCGCCAGCCAGCCGCTGCCGAGGCACGAGCCGGCCTTTCTCATCTACCCGCTCATCTAC GTCATGTGCACCCTCCCCCTTGCCCTTGGCCGGATCGCCACCATGGCCGGCAGGCAGGTGCCGCTCGGATACTTT TGTTTTGCCGGCGCCATCATCGCCTTCAACGGGTCCTTCGACTGCCTGCTGTTCGGCACGACGCGCAACGCCATC ATCTTCGGCTCCCCGTCGGACCTCTCCGCCGACGACACGGGCCTGAAGACCTTTGGGTTCCTGAAGACGCCGTCG ACGAGGCGCTACGGCAACATGATCTGGATCCAGGGCGGCGGGAGGAGGCGGAGGCAAGAGGACAAGGTCGCGGGC GGCTGGTGCTCATGGGAGCGCCTGGGGAACGGGCGCCGGCACAACACGAGTCCCTGGCCTGCGAACGGCGCCTCG TCGGATACGAGCCAGGAGTTCATCAGGGGGGCCGCGATCCAGATGGACATGGTGACGAGCGTTGTGGTGGAGATG AACGGTGAAAAGAATCACCGCACACTGCCGCCCTGCAGCAAGGCTTTGAGTGCCACGGCGTCAGAGACGGGCACG GAGATGTCGTCGTTGAAATCCTAG |
Gene | >Hirsu2|2643 ATGGCGTGGGGAGAGCTGAAGGCCGACGGTCAAAGTCTCAGCCCTCTGACGCCGGACCTGCGACGAGGACTGATC GCCATCACCGTGCTGGCGCTCGTGTCCTTCGCCACCTCGACGATCCTGTTCCTCTACTTGACCTACAAGCTCGTC GTCTGGCGCTTCCTCGTCCCGCCGGAGCAGAAGCAGCAGCAGGGCGAGCTCGAGCGCAGGCCGTCGCACGCGACC TCGGACTTCAGGCTCGGCATCGATGGCATCTTCACCGACGGCGACCCGTCCCGGCTCGACGTGGCGGTGTCTCGG CAGGAGGACAGGCGCCGACGGAGCAAGACTCCGCCGCCGAATCAGTTCCTCGTCCTCATCTACAACCTCCTCCTG GCCGACATGCACCAGAGCCTGGCCTTCCTCCTCAACGCGTCATGGCTGCGAGCCGACGGCATCATGGCACGGACG CCGACGTGCTTCGTGCAGGGCATGTTGGTCTCGACGGGCGACCTGTCGTCGAGCATGTTCATCAGCACCATCGCC GTCCACACCTACCTCTCCGTCGTCCGGAACTGCCGGCCCTCTCACCGAACCTTTTTCGCCGTCATCCTCGGTAAC TGGGCCTTCGTCTACGCCATATCCCTGCTGCCCGTGGCTGTGACGCGCAACGGCGCCGAGCGCGGTGGCTTCTTC GTTCGCGCCGGCGCCTGGGTACGTTGAGCCGATGAATCCGCCGAACCGAGCCGGCTGTTCTCGTCGAGGAAGCCT TGCAGAGCTGACGCCAAGCCACCCCGGCTCCGTCTCTAGTGCTGGATGAATCGAGACTACGAGCAGCTTCGCCTC GCGACTCACTACTTCTTCATCTTCCTCGCGTTGGGCGTCACGTCAGCGCTGTACGTCGGTATCTTTGTCTCTCTC CGCCGCCAACGGGCTCTGGCACGCCGATGCGTCATCGCCGCCAGCCAGCCGCTGCCGAGGCACGAGCCGGCCTTT CTCATCTACCCGCTCATCTACGTCATGTGCACCCTCCCCCTTGCCCTTGGCCGGATCGCCACCATGGCCGGCAGG CAGGTGCCGCTCGGATACTTTTGTTTTGCCGGCGCCATCATCGCCTTCAACGGGTCCTTCGACTGCCTGCTGTTC GGCACGACGCGCAACGCCATCATCTTCGGCTCCCCGTCGGACCTCTCCGCCGACGACACGGGCCTGAAGACCTTT GGGTTCCTGAAGACGCCGTCGACGAGGCGCTACGGCAACATGATCTGGATCCAGGGCGGCGGGAGGAGGCGGAGG CAAGAGGACAAGGTCGCGGGCGGCTGGTGCTCATGGGAGCGCCTGGGGAACGGGCGCCGGCACAACACGAGTCCC TGGCCTGCGAACGGCGCCTCGTCGGATACGAGCCAGGAGTTCATCAGGGGGGCCGCGATCCAGATGGACATGGTG ACGAGCGTTGTGGTGGAGATGAACGGTGAAAAGAATCACCGCACACTGCCGCCCTGCAGCAAGGCTTTGAGTGCC ACGGCGTCAGAGACGGGCACGGAGATGTCGTCGTTGAAATCCTAG |