Protein ID | Hirsu2|264 |
Gene name | |
Location | Contig_105:3612..5328 |
Strand | + |
Gene length (bp) | 1716 |
Transcript length (bp) | 1413 |
Coding sequence length (bp) | 1413 |
Protein length (aa) | 471 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07690 | MFS_1 | Major Facilitator Superfamily | 9.5E-20 | 57 | 422 |
PF07690 | MFS_1 | Major Facilitator Superfamily | 5.5E-10 | 284 | 465 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q08280|BSC6_YEAST | Bypass of stop codon protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BSC6 PE=1 SV=1 | 51 | 457 | 1.0E-24 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0022857 | transmembrane transporter activity | Yes |
GO:0009987 | cellular process | No |
GO:0051179 | localization | No |
GO:0005215 | transporter activity | No |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0003674 | molecular_function | No |
GO:0006810 | transport | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Lysosome/Vacuole | Signal peptide|Transmembrane domain | 0.1665 | 0.1223 | 0.1201 | 0.3003 | 0.0368 | 0.0043 | 0.6155 | 0.5809 | 0.5517 | 0.1107 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 56 | 78 | 22 |
2 | 83 | 105 | 22 |
3 | 174 | 196 | 22 |
4 | 206 | 228 | 22 |
5 | 282 | 304 | 22 |
6 | 348 | 367 | 19 |
7 | 369 | 391 | 22 |
8 | 406 | 428 | 22 |
9 | 433 | 455 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 222 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|264 MTATTTLQPAVEALELDRPTAPEHESAPATGSEPSPPDTGLSRAEAKTRHLQLASVGFSFLVAGVNDGSIGALLP YVLREYRISTAIVSSIYGASFVGWLTAALTSTHLCQHLDLGAVLAVGALCQVAAHALRAWGPPLGLFTASFALAS LGQAFQDTQGNTLVAASKGAAHRWLALIHASYMAGCLVGPFVATAVAASGGRVSRWYLFYAFPLGLGVANLVAVF VAFRGSIRLRRQTAPAVSQSRSLQDGSGSSYAQGREATAGDRSAASLIQATLAMPSVWLLCTFFFFYLGSVLTAS GWVVEYLVDVRHGNLSQMGYVPAGFNGGALLGRLLLAEPTHRFGERNMVLFYTLSAIALQLVFWLVPNIIAASIA VSLIGFFTGPLFATGISLGSKLFPPHLHSTALAFVFVFAQMGGSLFPIVTGLVSARASVTVLQPILTGLLSATAI SWILVPRPKSSPNSGALHQE* |
Coding | >Hirsu2|264 ATGACGGCCACGACCACGCTTCAACCTGCTGTCGAAGCGCTCGAGCTCGATCGGCCGACGGCCCCGGAGCACGAG TCCGCGCCGGCGACCGGCTCGGAGCCGTCCCCACCCGACACAGGTCTGAGCCGGGCCGAGGCAAAGACCCGTCAT CTGCAGCTGGCCAGCGTCGGCTTCTCCTTCTTGGTGGCAGGCGTCAACGACGGCAGCATCGGCGCGCTGCTCCCT TACGTCCTCCGCGAGTACCGCATCAGCACCGCCATCGTCTCCAGCATTTATGGCGCCAGCTTCGTCGGCTGGCTG ACGGCGGCGTTGACGAGCACGCACCTGTGCCAGCACCTCGATCTCGGCGCCGTGCTGGCCGTCGGCGCGCTCTGC CAGGTCGCCGCGCACGCCCTCCGCGCCTGGGGCCCGCCCCTCGGCCTCTTCACCGCCTCGTTCGCGCTCGCCAGC CTCGGCCAGGCCTTTCAGGACACCCAGGGGAACACCTTGGTGGCGGCCTCCAAGGGCGCGGCTCATCGCTGGCTG GCCCTCATCCACGCCTCCTACATGGCCGGCTGCCTTGTCGGGCCCTTTGTCGCCACGGCCGTTGCCGCCTCTGGC GGCCGTGTCTCTCGCTGGTATCTATTCTACGCTTTCCCCCTGGGCCTGGGTGTCGCAAACTTGGTCGCCGTCTTC GTCGCATTTCGGGGCTCAATCCGGCTGCGGCGCCAGACCGCTCCGGCAGTATCTCAAAGCCGCTCTCTTCAAGAT GGCTCCGGCAGCTCTTACGCACAAGGTAGAGAGGCTACTGCTGGTGACAGAAGTGCCGCCAGCCTCATCCAGGCT ACCCTGGCCATGCCTTCGGTCTGGCTGCTGTGCACCTTTTTCTTCTTCTATCTCGGCTCCGTCTTGACGGCGAGC GGCTGGGTCGTCGAGTATCTCGTCGATGTCCGCCACGGCAACTTATCGCAAATGGGCTATGTGCCGGCCGGCTTC AATGGCGGAGCGCTCCTCGGCAGGCTGCTCCTGGCTGAGCCGACACACCGATTCGGCGAGCGCAACATGGTGCTC TTCTACACGCTTTCTGCCATCGCCCTCCAGCTTGTTTTTTGGCTGGTACCAAACATCATCGCGGCCTCGATTGCC GTCAGTCTCATTGGTTTCTTTACCGGCCCGCTATTCGCTACCGGCATATCTCTCGGCTCCAAGCTTTTCCCGCCG CATCTCCACTCGACCGCCCTGGCCTTCGTCTTTGTCTTCGCTCAGATGGGCGGCTCTTTGTTTCCCATCGTCACG GGTCTGGTCTCGGCGCGTGCCAGTGTCACCGTCCTACAACCCATTCTGACAGGGCTTCTCTCAGCAACGGCAATC AGCTGGATTCTCGTGCCGCGCCCCAAATCGTCGCCGAACTCTGGCGCATTACACCAAGAATAG |
Transcript | >Hirsu2|264 ATGACGGCCACGACCACGCTTCAACCTGCTGTCGAAGCGCTCGAGCTCGATCGGCCGACGGCCCCGGAGCACGAG TCCGCGCCGGCGACCGGCTCGGAGCCGTCCCCACCCGACACAGGTCTGAGCCGGGCCGAGGCAAAGACCCGTCAT CTGCAGCTGGCCAGCGTCGGCTTCTCCTTCTTGGTGGCAGGCGTCAACGACGGCAGCATCGGCGCGCTGCTCCCT TACGTCCTCCGCGAGTACCGCATCAGCACCGCCATCGTCTCCAGCATTTATGGCGCCAGCTTCGTCGGCTGGCTG ACGGCGGCGTTGACGAGCACGCACCTGTGCCAGCACCTCGATCTCGGCGCCGTGCTGGCCGTCGGCGCGCTCTGC CAGGTCGCCGCGCACGCCCTCCGCGCCTGGGGCCCGCCCCTCGGCCTCTTCACCGCCTCGTTCGCGCTCGCCAGC CTCGGCCAGGCCTTTCAGGACACCCAGGGGAACACCTTGGTGGCGGCCTCCAAGGGCGCGGCTCATCGCTGGCTG GCCCTCATCCACGCCTCCTACATGGCCGGCTGCCTTGTCGGGCCCTTTGTCGCCACGGCCGTTGCCGCCTCTGGC GGCCGTGTCTCTCGCTGGTATCTATTCTACGCTTTCCCCCTGGGCCTGGGTGTCGCAAACTTGGTCGCCGTCTTC GTCGCATTTCGGGGCTCAATCCGGCTGCGGCGCCAGACCGCTCCGGCAGTATCTCAAAGCCGCTCTCTTCAAGAT GGCTCCGGCAGCTCTTACGCACAAGGTAGAGAGGCTACTGCTGGTGACAGAAGTGCCGCCAGCCTCATCCAGGCT ACCCTGGCCATGCCTTCGGTCTGGCTGCTGTGCACCTTTTTCTTCTTCTATCTCGGCTCCGTCTTGACGGCGAGC GGCTGGGTCGTCGAGTATCTCGTCGATGTCCGCCACGGCAACTTATCGCAAATGGGCTATGTGCCGGCCGGCTTC AATGGCGGAGCGCTCCTCGGCAGGCTGCTCCTGGCTGAGCCGACACACCGATTCGGCGAGCGCAACATGGTGCTC TTCTACACGCTTTCTGCCATCGCCCTCCAGCTTGTTTTTTGGCTGGTACCAAACATCATCGCGGCCTCGATTGCC GTCAGTCTCATTGGTTTCTTTACCGGCCCGCTATTCGCTACCGGCATATCTCTCGGCTCCAAGCTTTTCCCGCCG CATCTCCACTCGACCGCCCTGGCCTTCGTCTTTGTCTTCGCTCAGATGGGCGGCTCTTTGTTTCCCATCGTCACG GGTCTGGTCTCGGCGCGTGCCAGTGTCACCGTCCTACAACCCATTCTGACAGGGCTTCTCTCAGCAACGGCAATC AGCTGGATTCTCGTGCCGCGCCCCAAATCGTCGCCGAACTCTGGCGCATTACACCAAGAATAG |
Gene | >Hirsu2|264 ATGACGGCCACGACCACGCTTCAACCTGCTGTCGAAGCGCTCGAGCTCGATCGGCCGACGGCCCCGGAGCACGAG TCCGCGCCGGCGACCGGCTCGGAGCCGTCCCCACCCGACACAGGTCTGAGCCGGGCCGAGGCAAAGACCCGTCAT CTGCAGCTGGCCAGCGTCGGCTTCTCCTTCTTGGTGGCAGGCGTCAACGACGGCAGCATCGGCGCGCTGCTCCCT TACGTCCTCCGCGAGTACCGCATCAGCACCGCCATCGTCTCCAGCATGTGAGCCTCCTCGAGATCCGAGCTTCAC GTGATCTGCCGCGGCATGATCGTGTGCCGGGAGGCGACTGGGGTTTGACGGATTCTGACACCCGGACCTGGCCGG CAGTTATGGCGCCAGCTTCGTCGGCTGGCTGACGGCGGCGTTGACGAGCACGCACCTGTGCCAGCACCTCGATCT CGGCGCCGTGCTGGCCGTCGGCGCGCTCTGCCAGGTCGCCGCGCACGCCCTCCGCGCCTGGGGCCCGCCCCTCGG CCTCTTCACCGCCTCGTTCGCGCTCGCCAGCCTCGGCCAGGCCTTTCAGGACACCCAGGGGAACACCTTGGTGGC GGCCTCCAAGGGCGCGGCTCATCGCTGGCTGGCCCTCATCCACGCCTCCTACATGGCCGGCTGCCTTGTCGGGCC CTTTGTCGCCACGGCCGTTGCCGCCTCTGGCGGCCGTGTCTCTCGCTGGTATCTATTCTACGCTTTCCCCCTGGG CCTGGGTGTCGCAAACTTGGTCGCCGTCTTCGTCGCATTTCGGGGCTCAATCCGGCTGCGGCGCCAGACCGCTCC GGCAGTATCTCAAAGCCGCTCTCTTCAAGATGGCTCCGGCAGCTCTTACGCACAAGGTAGAGAGGCTACTGCTGG TGACAGAAGTGCCGCCAGCCTCATCCAGGCTACCCTGGCCATGCCTTCGGTCTGGCTGCTGTGCACCTTTTTCTT CTTCTATCTCGGCTCCGTCTTGACGGCGAGCGGCTGGGTCGTCGAGTATCTCGTCGATGTCCGCCACGGCAACTT ATCGCAAATGGGCTATGTGCCGGCCGGCTTCAATGGCGGAGCGCTCCTCGGCAGGCTGCTCCTGGCTGAGCCGAC ACACCGATTCGGCGAGCGCAACATGGTGCTCTTCTACACGCTTTCTGCCATCGCCCTCCAGCTTGTTTTTTGGCT GTAAGTCCCGGACCTAGTCAGCCTTGTCAAGGCCGCCCTTCACCCACGTCGAGCCGCAACAGGATGATCGGCCAC GGGAGCGGATTTCGCTGCTAAACAGTCTGTCTAAACAATAGGGTACCAAACATCATCGCGGCCTCGATTGCCGTC AGTCTCATTGGTTTCTTTACCGGCCCGCTATTCGCTACCGTGAGTCGGTCCGACTTGTCCGCTTCTAGGCTCTCT ATATGCCTCTATTCGCATCCCGTCAACTGATCCGGCGTCATATAGGGCATATCTCTCGGCTCCAAGCTTTTCCCG CCGCATCTCCACTCGACCGCCCTGGCCTTCGTCTTTGTCTTCGCTCAGATGGGCGGCTCTTTGTTTCCCATCGTC ACGGGTCTGGTCTCGGCGCGTGCCAGTGTCACCGTCCTACAACCCATTCTGACAGGGCTTCTCTCAGCAACGGCA ATCAGCTGGATTCTCGTGCCGCGCCCCAAATCGTCGCCGAACTCTGGCGCATTACACCAAGAATAG |