Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2636
Gene name
LocationContig_1637:1472..2702
Strand-
Gene length (bp)1230
Transcript length (bp)1230
Coding sequence length (bp)1230
Protein length (aa) 410

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.5136 0.6511 0.438 0.075 0.1556 0.1327 0.1152 0.1005 0.1389 0.013

SignalP

SignalP signal predicted Location Score
Yes 1 - 34 0.841405

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9124
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|2636 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2636
MSSSPASAAGTAVPWAHGSLAAAFVIELCMCTQAQCLHLGPHLSGSSDDPPSEIRNGLGPDNVSPTSWHSPGTTT
AATTATANKSPRLIGRGRLENRPSIHTDARRGEPQTRQGAVAAKRIGSHQRTLLPSPRFKTSSPANRTLPSAHGS
APSRYRAWGPGEMDGWWERGRGKAETCQVRTRREVGKREGLTQFMPSRARRQTPDPRPMLSRFTRRGLCRARPWL
RRLGDDGWVASGGGRERDMTREREGRVGMPSFQSPSSDDVGLPMCDSPQTVSHGTTTLAASDHGLASDRARQGPS
GGIHVDDEADRASPPPFFPPPSVWRHQRGKPAVDISVPKPLACPSAVARGRVRDDDGGGGASDEASARTPGTGAH
EARRARRRMTAGDASHVVVSSSCHPGLLLLTSPS*
Coding >Hirsu2|2636
ATGAGCTCATCTCCTGCTTCGGCTGCAGGCACGGCCGTCCCTTGGGCGCACGGCTCATTGGCCGCAGCCTTCGTC
ATCGAGTTATGCATGTGCACCCAAGCTCAATGCCTGCACCTGGGCCCTCACCTGAGCGGAAGTTCTGATGATCCC
CCATCCGAGATACGAAACGGCCTCGGCCCTGACAACGTGTCACCCACCTCCTGGCACAGCCCTGGAACGACGACG
GCGGCGACGACGGCGACGGCCAACAAATCCCCACGACTCATCGGGCGAGGGAGACTCGAGAACCGCCCGTCTATA
CATACGGATGCGAGGCGAGGGGAGCCGCAGACAAGACAGGGGGCCGTGGCGGCCAAACGGATCGGCTCCCATCAA
CGAACGCTGCTCCCGTCACCACGATTCAAGACGTCGTCGCCGGCCAACAGGACCCTTCCCTCGGCGCACGGGTCC
GCACCCAGCCGGTACCGCGCGTGGGGACCCGGGGAGATGGACGGATGGTGGGAGAGAGGTCGAGGGAAAGCTGAA
ACTTGTCAGGTCCGCACGCGGCGCGAGGTCGGAAAGAGGGAGGGCCTGACGCAATTTATGCCAAGTCGGGCGCGG
CGCCAGACCCCTGATCCTCGTCCCATGCTCTCTCGCTTTACCCGCCGCGGTCTGTGCCGGGCGCGGCCTTGGTTG
AGACGGCTTGGAGACGACGGATGGGTCGCGAGCGGAGGGGGGAGAGAGAGAGACATGACGAGAGAGCGAGAGGGC
CGGGTCGGTATGCCAAGTTTCCAGAGTCCGTCGAGCGACGACGTCGGGCTACCCATGTGCGACTCCCCACAAACT
GTTTCTCATGGAACGACGACTCTGGCCGCCAGTGACCACGGCCTTGCGTCGGATCGCGCAAGACAGGGCCCAAGC
GGCGGGATCCATGTCGACGATGAAGCAGACAGAGCCTCCCCCCCCCCCTTCTTCCCACCGCCGTCCGTATGGCGA
CACCAGCGCGGGAAGCCGGCCGTCGACATATCAGTCCCCAAACCGCTTGCCTGCCCGTCGGCCGTGGCACGAGGG
CGCGTCCGAGACGACGACGGCGGCGGCGGCGCATCGGACGAAGCGTCGGCACGGACGCCCGGCACCGGCGCACAC
GAGGCCCGACGGGCTCGGCGGCGCATGACTGCTGGCGATGCGTCTCACGTCGTCGTCTCATCCAGCTGTCATCCG
GGCTTGCTCCTCCTTACGTCGCCGTCGTGA
Transcript >Hirsu2|2636
ATGAGCTCATCTCCTGCTTCGGCTGCAGGCACGGCCGTCCCTTGGGCGCACGGCTCATTGGCCGCAGCCTTCGTC
ATCGAGTTATGCATGTGCACCCAAGCTCAATGCCTGCACCTGGGCCCTCACCTGAGCGGAAGTTCTGATGATCCC
CCATCCGAGATACGAAACGGCCTCGGCCCTGACAACGTGTCACCCACCTCCTGGCACAGCCCTGGAACGACGACG
GCGGCGACGACGGCGACGGCCAACAAATCCCCACGACTCATCGGGCGAGGGAGACTCGAGAACCGCCCGTCTATA
CATACGGATGCGAGGCGAGGGGAGCCGCAGACAAGACAGGGGGCCGTGGCGGCCAAACGGATCGGCTCCCATCAA
CGAACGCTGCTCCCGTCACCACGATTCAAGACGTCGTCGCCGGCCAACAGGACCCTTCCCTCGGCGCACGGGTCC
GCACCCAGCCGGTACCGCGCGTGGGGACCCGGGGAGATGGACGGATGGTGGGAGAGAGGTCGAGGGAAAGCTGAA
ACTTGTCAGGTCCGCACGCGGCGCGAGGTCGGAAAGAGGGAGGGCCTGACGCAATTTATGCCAAGTCGGGCGCGG
CGCCAGACCCCTGATCCTCGTCCCATGCTCTCTCGCTTTACCCGCCGCGGTCTGTGCCGGGCGCGGCCTTGGTTG
AGACGGCTTGGAGACGACGGATGGGTCGCGAGCGGAGGGGGGAGAGAGAGAGACATGACGAGAGAGCGAGAGGGC
CGGGTCGGTATGCCAAGTTTCCAGAGTCCGTCGAGCGACGACGTCGGGCTACCCATGTGCGACTCCCCACAAACT
GTTTCTCATGGAACGACGACTCTGGCCGCCAGTGACCACGGCCTTGCGTCGGATCGCGCAAGACAGGGCCCAAGC
GGCGGGATCCATGTCGACGATGAAGCAGACAGAGCCTCCCCCCCCCCCTTCTTCCCACCGCCGTCCGTATGGCGA
CACCAGCGCGGGAAGCCGGCCGTCGACATATCAGTCCCCAAACCGCTTGCCTGCCCGTCGGCCGTGGCACGAGGG
CGCGTCCGAGACGACGACGGCGGCGGCGGCGCATCGGACGAAGCGTCGGCACGGACGCCCGGCACCGGCGCACAC
GAGGCCCGACGGGCTCGGCGGCGCATGACTGCTGGCGATGCGTCTCACGTCGTCGTCTCATCCAGCTGTCATCCG
GGCTTGCTCCTCCTTACGTCGCCGTCGTGA
Gene >Hirsu2|2636
ATGAGCTCATCTCCTGCTTCGGCTGCAGGCACGGCCGTCCCTTGGGCGCACGGCTCATTGGCCGCAGCCTTCGTC
ATCGAGTTATGCATGTGCACCCAAGCTCAATGCCTGCACCTGGGCCCTCACCTGAGCGGAAGTTCTGATGATCCC
CCATCCGAGATACGAAACGGCCTCGGCCCTGACAACGTGTCACCCACCTCCTGGCACAGCCCTGGAACGACGACG
GCGGCGACGACGGCGACGGCCAACAAATCCCCACGACTCATCGGGCGAGGGAGACTCGAGAACCGCCCGTCTATA
CATACGGATGCGAGGCGAGGGGAGCCGCAGACAAGACAGGGGGCCGTGGCGGCCAAACGGATCGGCTCCCATCAA
CGAACGCTGCTCCCGTCACCACGATTCAAGACGTCGTCGCCGGCCAACAGGACCCTTCCCTCGGCGCACGGGTCC
GCACCCAGCCGGTACCGCGCGTGGGGACCCGGGGAGATGGACGGATGGTGGGAGAGAGGTCGAGGGAAAGCTGAA
ACTTGTCAGGTCCGCACGCGGCGCGAGGTCGGAAAGAGGGAGGGCCTGACGCAATTTATGCCAAGTCGGGCGCGG
CGCCAGACCCCTGATCCTCGTCCCATGCTCTCTCGCTTTACCCGCCGCGGTCTGTGCCGGGCGCGGCCTTGGTTG
AGACGGCTTGGAGACGACGGATGGGTCGCGAGCGGAGGGGGGAGAGAGAGAGACATGACGAGAGAGCGAGAGGGC
CGGGTCGGTATGCCAAGTTTCCAGAGTCCGTCGAGCGACGACGTCGGGCTACCCATGTGCGACTCCCCACAAACT
GTTTCTCATGGAACGACGACTCTGGCCGCCAGTGACCACGGCCTTGCGTCGGATCGCGCAAGACAGGGCCCAAGC
GGCGGGATCCATGTCGACGATGAAGCAGACAGAGCCTCCCCCCCCCCCTTCTTCCCACCGCCGTCCGTATGGCGA
CACCAGCGCGGGAAGCCGGCCGTCGACATATCAGTCCCCAAACCGCTTGCCTGCCCGTCGGCCGTGGCACGAGGG
CGCGTCCGAGACGACGACGGCGGCGGCGGCGCATCGGACGAAGCGTCGGCACGGACGCCCGGCACCGGCGCACAC
GAGGCCCGACGGGCTCGGCGGCGCATGACTGCTGGCGATGCGTCTCACGTCGTCGTCTCATCCAGCTGTCATCCG
GGCTTGCTCCTCCTTACGTCGCCGTCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail