Protein ID | Hirsu2|2622 |
Gene name | |
Location | Contig_1631:929..3818 |
Strand | + |
Gene length (bp) | 2889 |
Transcript length (bp) | 2889 |
Coding sequence length (bp) | 2889 |
Protein length (aa) | 963 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04130 | GCP_C_terminal | Gamma tubulin complex component C-terminal | 2.6E-74 | 597 | 959 |
PF17681 | GCP_N_terminal | Gamma tubulin complex component N-terminal | 1.0E-26 | 181 | 455 |
GO Term | Description | Terminal node |
---|---|---|
GO:0043015 | gamma-tubulin binding | Yes |
GO:0008092 | cytoskeletal protein binding | No |
GO:0005515 | protein binding | No |
GO:0005488 | binding | No |
GO:0015631 | tubulin binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 66 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2622 MTRADDEPYVFAIPQFGQTSKWLERVAQEAPPFFATNPGPFAVSAPGEPSSVASDEPIPGLLNFKPIAPDKDGFF KLPPLGLAESAPGTAEPAPRPAADDSSEAEATGSDAWIGTEEPPTKPVGFRTWDSFRTGGLAPHRPLLISEAGPT AYDALLRRTTGPPGLSNSDVSVVETRAYFSSLLALALGRDSVFFRKADHPQTFKPTLAKIRISGYSRQLLQGVES QTLRCGMSFSQLSAFVRTTYATKSTRCEVALASSIDQILQAVERKLTVTGTRPRSLLQLQSSIRAVSAMLLPLRK LVLRLRRGALDEDVLSLLFHTASALDDGEGCIRFAFRQILRRVSAPWIEHLEEWIGTRQEEGIPLSKTHIGEGRG FVKVEAESYVDDLGRQVEEVDFRLDRSRVPDFMPDDLIDSIFETGRNLRFIKSFHPEHPLAQQCVVESSQPPKAQ WLYDWDSILELEGRVSRYRDSLCDALEESRRSSSPRACRVGVPAPEPEPTSPLGFFGLDEKDMEACMLASMAQLS RPMTEQESKDPEDDVLRRRLFDSHGPDSEDAGATPHWSLLPVLSFGGIASAQGQIVSRESLRLLFDAHDIGKHLR LQRDFHLLGNGMFSSRLAQALFDPDLHSAERVAGTVRQGGVMGLRLGGRDSWPPASSELRLVLMGVLSDSYGSQQ ESGRTERPARDGDGVALPGDLSFAVRDLSTEEIDKCMNPDSLEALDFLRLSYTTPPELCGIITPINMTHYDRIFK LLLRVLRMLHVVNQHCLGINSRAGTWQSPSSASYLFAREAHRFVSSVASYFFDSGIAVPWQTFEQGLAEMRAALG DGRGGGPPEELPGPDKLRELHSRVLDRIMYALFLKKRQRPVLQLLEDLFGTVLEYAKFARGQASGTGGERAEGHD RASELYGDFKRKMHVFMAVCRGLTEKGRAGSGRAVEELGVGEDSMVAQLLVKLDMGSFYTKR* |
Coding | >Hirsu2|2622 ATGACCAGGGCCGACGACGAACCGTACGTCTTCGCCATCCCCCAGTTCGGGCAAACGTCGAAATGGCTGGAGCGG GTGGCCCAAGAGGCGCCGCCCTTCTTCGCCACCAACCCCGGCCCGTTCGCCGTCTCTGCGCCGGGAGAGCCGAGC TCGGTCGCGTCGGATGAGCCGATCCCGGGCCTGTTGAACTTCAAGCCGATTGCGCCGGACAAGGATGGCTTCTTC AAGCTCCCTCCGCTCGGCCTCGCCGAGTCCGCGCCCGGGACCGCTGAGCCGGCGCCCCGTCCCGCGGCCGACGAC TCGAGTGAGGCCGAGGCCACGGGCAGCGACGCGTGGATCGGCACAGAGGAGCCGCCCACGAAGCCGGTGGGCTTC AGGACATGGGACTCCTTCCGCACCGGAGGTCTCGCGCCGCATCGGCCCCTGCTCATCAGCGAGGCTGGCCCGACC GCCTACGACGCCTTGCTCCGCCGCACCACGGGTCCGCCAGGGCTCAGCAATTCGGACGTTTCCGTCGTCGAGACC CGAGCCTACTTCTCTTCCCTGCTGGCCCTGGCCCTCGGCCGAGACTCAGTCTTCTTCCGCAAGGCGGACCACCCC CAAACCTTCAAGCCCACTCTTGCCAAGATCCGGATCTCGGGCTACTCTCGTCAACTGCTGCAAGGCGTGGAAAGC CAGACACTTCGCTGTGGCATGTCTTTCTCGCAGCTCAGCGCCTTCGTTCGCACCACCTATGCGACCAAGTCGACT CGATGTGAGGTGGCTCTTGCCAGCAGCATCGACCAGATCTTGCAGGCCGTGGAGCGCAAGTTGACGGTCACCGGC ACGAGGCCCCGCTCACTCTTGCAACTCCAATCATCCATCAGGGCCGTCTCGGCAATGCTGCTGCCGCTGAGGAAA CTCGTTCTGCGTCTGCGGCGGGGAGCCTTGGACGAAGACGTCCTGTCACTACTCTTCCACACGGCATCCGCCCTG GACGACGGCGAAGGCTGTATCCGATTCGCGTTTCGCCAGATTCTGCGTCGCGTGTCTGCCCCCTGGATCGAGCAT CTTGAAGAATGGATCGGGACGAGACAAGAAGAGGGCATTCCGCTGTCAAAAACCCACATAGGGGAGGGCAGGGGA TTTGTCAAGGTAGAGGCAGAGTCGTACGTCGACGACCTCGGTCGGCAAGTGGAGGAAGTCGACTTCCGACTGGAT CGCAGCAGGGTTCCAGACTTCATGCCGGATGATCTGATCGACTCCATCTTCGAGACAGGTCGGAATCTGCGCTTC ATCAAGTCCTTCCACCCAGAGCACCCTCTGGCTCAACAATGCGTGGTCGAGTCGTCGCAACCACCCAAGGCACAA TGGCTTTACGACTGGGACTCAATATTGGAGCTCGAGGGTCGAGTTTCTCGCTACCGTGACAGTCTCTGCGACGCC CTGGAGGAGAGTCGCCGCAGCTCGTCGCCCCGGGCGTGCAGAGTCGGGGTTCCTGCACCCGAACCCGAGCCGACC TCTCCACTCGGCTTTTTCGGGCTCGACGAGAAGGACATGGAGGCGTGTATGCTGGCGTCGATGGCACAACTGAGT CGGCCGATGACTGAGCAGGAATCGAAGGATCCGGAGGACGACGTGCTCCGTCGGCGGCTCTTCGACAGCCACGGC CCGGATTCGGAAGATGCGGGTGCGACGCCGCACTGGTCGCTCTTACCGGTGCTGTCGTTTGGCGGCATCGCGTCG GCGCAAGGCCAGATTGTCAGTCGTGAGAGTCTCCGGCTTCTGTTCGACGCGCACGACATTGGCAAGCACCTGAGG CTGCAAAGAGACTTTCACCTGCTCGGCAACGGCATGTTTAGCAGCCGGCTCGCGCAGGCGCTCTTCGATCCGGAC CTGCATTCGGCAGAGAGGGTGGCCGGCACGGTCCGACAGGGGGGCGTCATGGGGCTGCGTCTGGGAGGACGGGAC AGTTGGCCCCCGGCCAGCTCGGAGCTGCGCCTGGTCCTGATGGGAGTGCTGAGCGACAGTTACGGCTCGCAGCAG GAGTCGGGCCGGACGGAGCGACCTGCTCGGGATGGCGATGGCGTGGCCCTGCCCGGCGACCTGAGCTTCGCGGTG CGCGACCTGTCGACCGAGGAGATCGACAAGTGCATGAACCCGGATTCGCTGGAGGCGCTGGACTTTCTCCGTCTG TCCTACACGACGCCGCCGGAGCTGTGCGGCATCATCACGCCGATCAACATGACGCACTACGACCGCATCTTCAAG CTGCTGTTGCGAGTCTTGCGGATGCTGCACGTCGTCAACCAGCACTGCCTCGGCATCAACTCACGGGCCGGCACG TGGCAAAGCCCGTCCAGCGCGTCGTACCTTTTTGCCCGAGAGGCACACCGTTTCGTGTCGAGCGTGGCCTCGTAC TTTTTCGACTCGGGCATAGCCGTCCCGTGGCAGACGTTTGAGCAGGGGCTGGCCGAGATGCGGGCCGCGCTCGGG GACGGCCGAGGGGGGGGGCCGCCGGAGGAGCTCCCGGGCCCCGACAAGCTGCGCGAGCTGCATAGCCGGGTCCTC GACCGGATCATGTATGCCCTGTTCCTGAAGAAGAGGCAGCGGCCGGTGCTGCAGCTGCTCGAGGATTTGTTCGGC ACGGTGCTCGAGTATGCCAAATTCGCACGAGGACAGGCCTCGGGCACGGGCGGCGAGAGGGCAGAGGGCCACGAC AGGGCGTCGGAGCTGTACGGCGACTTCAAGAGGAAGATGCACGTCTTCATGGCGGTCTGTCGCGGCCTGACGGAG AAGGGCCGGGCGGGCAGCGGGAGGGCCGTCGAGGAGCTGGGCGTCGGCGAGGACAGCATGGTGGCGCAGCTGCTG GTGAAGCTGGACATGGGCAGCTTCTATACCAAGCGTTGA |
Transcript | >Hirsu2|2622 ATGACCAGGGCCGACGACGAACCGTACGTCTTCGCCATCCCCCAGTTCGGGCAAACGTCGAAATGGCTGGAGCGG GTGGCCCAAGAGGCGCCGCCCTTCTTCGCCACCAACCCCGGCCCGTTCGCCGTCTCTGCGCCGGGAGAGCCGAGC TCGGTCGCGTCGGATGAGCCGATCCCGGGCCTGTTGAACTTCAAGCCGATTGCGCCGGACAAGGATGGCTTCTTC AAGCTCCCTCCGCTCGGCCTCGCCGAGTCCGCGCCCGGGACCGCTGAGCCGGCGCCCCGTCCCGCGGCCGACGAC TCGAGTGAGGCCGAGGCCACGGGCAGCGACGCGTGGATCGGCACAGAGGAGCCGCCCACGAAGCCGGTGGGCTTC AGGACATGGGACTCCTTCCGCACCGGAGGTCTCGCGCCGCATCGGCCCCTGCTCATCAGCGAGGCTGGCCCGACC GCCTACGACGCCTTGCTCCGCCGCACCACGGGTCCGCCAGGGCTCAGCAATTCGGACGTTTCCGTCGTCGAGACC CGAGCCTACTTCTCTTCCCTGCTGGCCCTGGCCCTCGGCCGAGACTCAGTCTTCTTCCGCAAGGCGGACCACCCC CAAACCTTCAAGCCCACTCTTGCCAAGATCCGGATCTCGGGCTACTCTCGTCAACTGCTGCAAGGCGTGGAAAGC CAGACACTTCGCTGTGGCATGTCTTTCTCGCAGCTCAGCGCCTTCGTTCGCACCACCTATGCGACCAAGTCGACT CGATGTGAGGTGGCTCTTGCCAGCAGCATCGACCAGATCTTGCAGGCCGTGGAGCGCAAGTTGACGGTCACCGGC ACGAGGCCCCGCTCACTCTTGCAACTCCAATCATCCATCAGGGCCGTCTCGGCAATGCTGCTGCCGCTGAGGAAA CTCGTTCTGCGTCTGCGGCGGGGAGCCTTGGACGAAGACGTCCTGTCACTACTCTTCCACACGGCATCCGCCCTG GACGACGGCGAAGGCTGTATCCGATTCGCGTTTCGCCAGATTCTGCGTCGCGTGTCTGCCCCCTGGATCGAGCAT CTTGAAGAATGGATCGGGACGAGACAAGAAGAGGGCATTCCGCTGTCAAAAACCCACATAGGGGAGGGCAGGGGA TTTGTCAAGGTAGAGGCAGAGTCGTACGTCGACGACCTCGGTCGGCAAGTGGAGGAAGTCGACTTCCGACTGGAT CGCAGCAGGGTTCCAGACTTCATGCCGGATGATCTGATCGACTCCATCTTCGAGACAGGTCGGAATCTGCGCTTC ATCAAGTCCTTCCACCCAGAGCACCCTCTGGCTCAACAATGCGTGGTCGAGTCGTCGCAACCACCCAAGGCACAA TGGCTTTACGACTGGGACTCAATATTGGAGCTCGAGGGTCGAGTTTCTCGCTACCGTGACAGTCTCTGCGACGCC CTGGAGGAGAGTCGCCGCAGCTCGTCGCCCCGGGCGTGCAGAGTCGGGGTTCCTGCACCCGAACCCGAGCCGACC TCTCCACTCGGCTTTTTCGGGCTCGACGAGAAGGACATGGAGGCGTGTATGCTGGCGTCGATGGCACAACTGAGT CGGCCGATGACTGAGCAGGAATCGAAGGATCCGGAGGACGACGTGCTCCGTCGGCGGCTCTTCGACAGCCACGGC CCGGATTCGGAAGATGCGGGTGCGACGCCGCACTGGTCGCTCTTACCGGTGCTGTCGTTTGGCGGCATCGCGTCG GCGCAAGGCCAGATTGTCAGTCGTGAGAGTCTCCGGCTTCTGTTCGACGCGCACGACATTGGCAAGCACCTGAGG CTGCAAAGAGACTTTCACCTGCTCGGCAACGGCATGTTTAGCAGCCGGCTCGCGCAGGCGCTCTTCGATCCGGAC CTGCATTCGGCAGAGAGGGTGGCCGGCACGGTCCGACAGGGGGGCGTCATGGGGCTGCGTCTGGGAGGACGGGAC AGTTGGCCCCCGGCCAGCTCGGAGCTGCGCCTGGTCCTGATGGGAGTGCTGAGCGACAGTTACGGCTCGCAGCAG GAGTCGGGCCGGACGGAGCGACCTGCTCGGGATGGCGATGGCGTGGCCCTGCCCGGCGACCTGAGCTTCGCGGTG CGCGACCTGTCGACCGAGGAGATCGACAAGTGCATGAACCCGGATTCGCTGGAGGCGCTGGACTTTCTCCGTCTG TCCTACACGACGCCGCCGGAGCTGTGCGGCATCATCACGCCGATCAACATGACGCACTACGACCGCATCTTCAAG CTGCTGTTGCGAGTCTTGCGGATGCTGCACGTCGTCAACCAGCACTGCCTCGGCATCAACTCACGGGCCGGCACG TGGCAAAGCCCGTCCAGCGCGTCGTACCTTTTTGCCCGAGAGGCACACCGTTTCGTGTCGAGCGTGGCCTCGTAC TTTTTCGACTCGGGCATAGCCGTCCCGTGGCAGACGTTTGAGCAGGGGCTGGCCGAGATGCGGGCCGCGCTCGGG GACGGCCGAGGGGGGGGGCCGCCGGAGGAGCTCCCGGGCCCCGACAAGCTGCGCGAGCTGCATAGCCGGGTCCTC GACCGGATCATGTATGCCCTGTTCCTGAAGAAGAGGCAGCGGCCGGTGCTGCAGCTGCTCGAGGATTTGTTCGGC ACGGTGCTCGAGTATGCCAAATTCGCACGAGGACAGGCCTCGGGCACGGGCGGCGAGAGGGCAGAGGGCCACGAC AGGGCGTCGGAGCTGTACGGCGACTTCAAGAGGAAGATGCACGTCTTCATGGCGGTCTGTCGCGGCCTGACGGAG AAGGGCCGGGCGGGCAGCGGGAGGGCCGTCGAGGAGCTGGGCGTCGGCGAGGACAGCATGGTGGCGCAGCTGCTG GTGAAGCTGGACATGGGCAGCTTCTATACCAAGCGTTGA |
Gene | >Hirsu2|2622 ATGACCAGGGCCGACGACGAACCGTACGTCTTCGCCATCCCCCAGTTCGGGCAAACGTCGAAATGGCTGGAGCGG GTGGCCCAAGAGGCGCCGCCCTTCTTCGCCACCAACCCCGGCCCGTTCGCCGTCTCTGCGCCGGGAGAGCCGAGC TCGGTCGCGTCGGATGAGCCGATCCCGGGCCTGTTGAACTTCAAGCCGATTGCGCCGGACAAGGATGGCTTCTTC AAGCTCCCTCCGCTCGGCCTCGCCGAGTCCGCGCCCGGGACCGCTGAGCCGGCGCCCCGTCCCGCGGCCGACGAC TCGAGTGAGGCCGAGGCCACGGGCAGCGACGCGTGGATCGGCACAGAGGAGCCGCCCACGAAGCCGGTGGGCTTC AGGACATGGGACTCCTTCCGCACCGGAGGTCTCGCGCCGCATCGGCCCCTGCTCATCAGCGAGGCTGGCCCGACC GCCTACGACGCCTTGCTCCGCCGCACCACGGGTCCGCCAGGGCTCAGCAATTCGGACGTTTCCGTCGTCGAGACC CGAGCCTACTTCTCTTCCCTGCTGGCCCTGGCCCTCGGCCGAGACTCAGTCTTCTTCCGCAAGGCGGACCACCCC CAAACCTTCAAGCCCACTCTTGCCAAGATCCGGATCTCGGGCTACTCTCGTCAACTGCTGCAAGGCGTGGAAAGC CAGACACTTCGCTGTGGCATGTCTTTCTCGCAGCTCAGCGCCTTCGTTCGCACCACCTATGCGACCAAGTCGACT CGATGTGAGGTGGCTCTTGCCAGCAGCATCGACCAGATCTTGCAGGCCGTGGAGCGCAAGTTGACGGTCACCGGC ACGAGGCCCCGCTCACTCTTGCAACTCCAATCATCCATCAGGGCCGTCTCGGCAATGCTGCTGCCGCTGAGGAAA CTCGTTCTGCGTCTGCGGCGGGGAGCCTTGGACGAAGACGTCCTGTCACTACTCTTCCACACGGCATCCGCCCTG GACGACGGCGAAGGCTGTATCCGATTCGCGTTTCGCCAGATTCTGCGTCGCGTGTCTGCCCCCTGGATCGAGCAT CTTGAAGAATGGATCGGGACGAGACAAGAAGAGGGCATTCCGCTGTCAAAAACCCACATAGGGGAGGGCAGGGGA TTTGTCAAGGTAGAGGCAGAGTCGTACGTCGACGACCTCGGTCGGCAAGTGGAGGAAGTCGACTTCCGACTGGAT CGCAGCAGGGTTCCAGACTTCATGCCGGATGATCTGATCGACTCCATCTTCGAGACAGGTCGGAATCTGCGCTTC ATCAAGTCCTTCCACCCAGAGCACCCTCTGGCTCAACAATGCGTGGTCGAGTCGTCGCAACCACCCAAGGCACAA TGGCTTTACGACTGGGACTCAATATTGGAGCTCGAGGGTCGAGTTTCTCGCTACCGTGACAGTCTCTGCGACGCC CTGGAGGAGAGTCGCCGCAGCTCGTCGCCCCGGGCGTGCAGAGTCGGGGTTCCTGCACCCGAACCCGAGCCGACC TCTCCACTCGGCTTTTTCGGGCTCGACGAGAAGGACATGGAGGCGTGTATGCTGGCGTCGATGGCACAACTGAGT CGGCCGATGACTGAGCAGGAATCGAAGGATCCGGAGGACGACGTGCTCCGTCGGCGGCTCTTCGACAGCCACGGC CCGGATTCGGAAGATGCGGGTGCGACGCCGCACTGGTCGCTCTTACCGGTGCTGTCGTTTGGCGGCATCGCGTCG GCGCAAGGCCAGATTGTCAGTCGTGAGAGTCTCCGGCTTCTGTTCGACGCGCACGACATTGGCAAGCACCTGAGG CTGCAAAGAGACTTTCACCTGCTCGGCAACGGCATGTTTAGCAGCCGGCTCGCGCAGGCGCTCTTCGATCCGGAC CTGCATTCGGCAGAGAGGGTGGCCGGCACGGTCCGACAGGGGGGCGTCATGGGGCTGCGTCTGGGAGGACGGGAC AGTTGGCCCCCGGCCAGCTCGGAGCTGCGCCTGGTCCTGATGGGAGTGCTGAGCGACAGTTACGGCTCGCAGCAG GAGTCGGGCCGGACGGAGCGACCTGCTCGGGATGGCGATGGCGTGGCCCTGCCCGGCGACCTGAGCTTCGCGGTG CGCGACCTGTCGACCGAGGAGATCGACAAGTGCATGAACCCGGATTCGCTGGAGGCGCTGGACTTTCTCCGTCTG TCCTACACGACGCCGCCGGAGCTGTGCGGCATCATCACGCCGATCAACATGACGCACTACGACCGCATCTTCAAG CTGCTGTTGCGAGTCTTGCGGATGCTGCACGTCGTCAACCAGCACTGCCTCGGCATCAACTCACGGGCCGGCACG TGGCAAAGCCCGTCCAGCGCGTCGTACCTTTTTGCCCGAGAGGCACACCGTTTCGTGTCGAGCGTGGCCTCGTAC TTTTTCGACTCGGGCATAGCCGTCCCGTGGCAGACGTTTGAGCAGGGGCTGGCCGAGATGCGGGCCGCGCTCGGG GACGGCCGAGGGGGGGGGCCGCCGGAGGAGCTCCCGGGCCCCGACAAGCTGCGCGAGCTGCATAGCCGGGTCCTC GACCGGATCATGTATGCCCTGTTCCTGAAGAAGAGGCAGCGGCCGGTGCTGCAGCTGCTCGAGGATTTGTTCGGC ACGGTGCTCGAGTATGCCAAATTCGCACGAGGACAGGCCTCGGGCACGGGCGGCGAGAGGGCAGAGGGCCACGAC AGGGCGTCGGAGCTGTACGGCGACTTCAAGAGGAAGATGCACGTCTTCATGGCGGTCTGTCGCGGCCTGACGGAG AAGGGCCGGGCGGGCAGCGGGAGGGCCGTCGAGGAGCTGGGCGTCGGCGAGGACAGCATGGTGGCGCAGCTGCTG GTGAAGCTGGACATGGGCAGCTTCTATACCAAGCGTTGA |