Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|2607
Gene name
Location	Contig_163:6475..7739
Strand	-
Gene length (bp)	1264
Transcript length (bp)	1152
Coding sequence length (bp)	1152
Protein length (aa)	384

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF16010	CDH-cyt	Cytochrome domain of cellobiose dehydrogenase	2.2E-22	30	180
PF03351	DOMON	DOMON domain	1.6E-09	47	127

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 23	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	218	240	22
2	247	264	17
3	274	296	22
4	309	331	22
5	341	363	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|2607 MRLNHQTAIAAAAALGATGASGASAPFCPESQVCFRWGIPQNAATSARGTVYFQLRAPTEYRWVGLGIGSQMRGA DMFVMYAAGNNNVTLSTRQGQGHTMPQYSARNDVQLMAGSGISNGQMTANVRCTGCDKLDPSGSSDWIAAWLEGS PMNSASPSERIAIHGGYDGFSVDLSKATVQSNQNPFQGGQGGAQVVGGGTTSGGGGGPSLGFAHGVVMAIIFLIG YPVGSMLMPLVGSWLLHASWQMLTFLGMWAGFGIGYVITQRANAFFVGTHVQFGVILCCLMCLQPVFGWFHHRYF VQHQQRGIVSYVHIFYGRSLMALGVINGGLGLKLAGGSGSFVTAYSVIAAIVFVAYILSAVYATFRKRRRVSTET PKLRLQSI*
Coding	>Hirsu2\|2607 ATGAGGCTCAATCACCAGACAGCCATCGCGGCCGCGGCCGCCCTCGGCGCGACCGGGGCCTCTGGCGCATCGGCG CCCTTCTGCCCCGAATCCCAGGTCTGCTTCCGCTGGGGAATTCCGCAAAACGCCGCCACTTCGGCCCGCGGCACC GTCTACTTCCAGCTTCGCGCGCCGACCGAATACCGGTGGGTCGGCCTCGGTATCGGATCCCAGATGCGCGGCGCC GACATGTTCGTCATGTACGCTGCCGGCAACAACAACGTGACGCTCAGCACCAGGCAGGGCCAGGGGCACACCATG CCTCAGTACAGCGCGAGGAACGACGTCCAGCTCATGGCCGGCTCCGGCATCAGCAACGGCCAGATGACGGCCAAC GTTCGCTGCACCGGCTGCGACAAGCTCGACCCATCGGGTTCGTCCGACTGGATAGCCGCTTGGCTCGAGGGTAGC CCAATGAACTCGGCCAGCCCGTCGGAGCGCATCGCCATCCACGGCGGCTATGACGGCTTCTCCGTCGACCTCTCC AAGGCCACTGTCCAGTCCAACCAGAACCCGTTCCAGGGAGGCCAGGGCGGAGCCCAGGTCGTCGGCGGCGGTACC ACCTCTGGCGGTGGCGGAGGGCCGTCTCTGGGATTTGCCCACGGCGTCGTCATGGCCATCATCTTCCTCATCGGA TATCCCGTCGGATCCATGCTGATGCCCCTGGTCGGCAGCTGGCTTCTACACGCCAGCTGGCAAATGCTCACCTTC CTGGGCATGTGGGCGGGCTTCGGTATCGGATATGTCATCACCCAGAGAGCCAATGCTTTCTTCGTCGGTACCCAT GTCCAATTTGGCGTCATCCTCTGCTGCCTCATGTGCCTGCAGCCCGTCTTCGGCTGGTTCCATCACAGATATTTC GTCCAGCATCAGCAGCGCGGCATCGTCAGCTACGTACACATCTTTTACGGCCGTTCTCTCATGGCCCTGGGCGTC ATCAACGGAGGATTGGGCCTGAAGCTCGCCGGCGGCTCCGGCTCCTTCGTCACGGCGTACAGCGTTATAGCTGCC ATCGTTTTCGTGGCATACATCTTGTCTGCCGTGTACGCCACATTCAGGAAGAGGCGCCGGGTTAGCACCGAGACG CCGAAGCTTCGACTGCAGTCCATCTGA
Transcript	>Hirsu2\|2607 ATGAGGCTCAATCACCAGACAGCCATCGCGGCCGCGGCCGCCCTCGGCGCGACCGGGGCCTCTGGCGCATCGGCG CCCTTCTGCCCCGAATCCCAGGTCTGCTTCCGCTGGGGAATTCCGCAAAACGCCGCCACTTCGGCCCGCGGCACC GTCTACTTCCAGCTTCGCGCGCCGACCGAATACCGGTGGGTCGGCCTCGGTATCGGATCCCAGATGCGCGGCGCC GACATGTTCGTCATGTACGCTGCCGGCAACAACAACGTGACGCTCAGCACCAGGCAGGGCCAGGGGCACACCATG CCTCAGTACAGCGCGAGGAACGACGTCCAGCTCATGGCCGGCTCCGGCATCAGCAACGGCCAGATGACGGCCAAC GTTCGCTGCACCGGCTGCGACAAGCTCGACCCATCGGGTTCGTCCGACTGGATAGCCGCTTGGCTCGAGGGTAGC CCAATGAACTCGGCCAGCCCGTCGGAGCGCATCGCCATCCACGGCGGCTATGACGGCTTCTCCGTCGACCTCTCC AAGGCCACTGTCCAGTCCAACCAGAACCCGTTCCAGGGAGGCCAGGGCGGAGCCCAGGTCGTCGGCGGCGGTACC ACCTCTGGCGGTGGCGGAGGGCCGTCTCTGGGATTTGCCCACGGCGTCGTCATGGCCATCATCTTCCTCATCGGA TATCCCGTCGGATCCATGCTGATGCCCCTGGTCGGCAGCTGGCTTCTACACGCCAGCTGGCAAATGCTCACCTTC CTGGGCATGTGGGCGGGCTTCGGTATCGGATATGTCATCACCCAGAGAGCCAATGCTTTCTTCGTCGGTACCCAT GTCCAATTTGGCGTCATCCTCTGCTGCCTCATGTGCCTGCAGCCCGTCTTCGGCTGGTTCCATCACAGATATTTC GTCCAGCATCAGCAGCGCGGCATCGTCAGCTACGTACACATCTTTTACGGCCGTTCTCTCATGGCCCTGGGCGTC ATCAACGGAGGATTGGGCCTGAAGCTCGCCGGCGGCTCCGGCTCCTTCGTCACGGCGTACAGCGTTATAGCTGCC ATCGTTTTCGTGGCATACATCTTGTCTGCCGTGTACGCCACATTCAGGAAGAGGCGCCGGGTTAGCACCGAGACG CCGAAGCTTCGACTGCAGTCCATCTGA
Gene	>Hirsu2\|2607 ATGAGGCTCAATCACCAGACAGCCATCGCGGCCGCGGCCGCCCTCGGTACGGCCACTCGTCAATGTCCTCTCCGT CCTCCGTCCCGCTGACACTCGTCTCTGCCAGGCGCGACCGGGGCCTCTGGCGCATCGGCGCCCTTCTGCCCCGAA TCCCAGGTCTGCTTCCGCTGGGGAATTCCGCAAAACGCCGCCACTTCGGCCCGCGGCACCGTCTACTTCCAGCTT CGCGCGCCGACCGAATACCGGTGGGTCGGCCTCGGTATCGGATCCCAGATGCGCGGCGCCGACATGTTCGTCATG TACGCTGCCGGCAACAACAACGTGACGCTCAGCACCAGGCAGGGCCAGGGGCACACCATGCCTCAGTACAGCGCG AGGAACGACGTCCAGCTCATGGCCGGCTCCGGCATCAGCAACGGCCAGATGACGGCCAACGTTCGCTGCACCGGC TGCGACAAGCTCGACCCATCGGGTTCGTCCGACTGGATAGCCGCTTGGCTCGAGGGTAGCCCAATGAACTCGGCC AGCCCGTCGGAGCGCATCGCCATCCACGGCGGCTATGACGGCTTCTCCGTCGACCTCTCCAAGGCCACTGTCCAG TCCAACCAGAACCCGTTCCAGGGAGGCCAGGGCGGAGCCCAGGTCGTCGGCGGCGGTACCACCTCTGGCGGTGGC GGAGGGCCGTCTCTGGGATTTGCCCACGGCGTCGTCATGGCCATCATCTTCCTCATCGGATATCCCGTCGGATCC ATGCTGATGCCCCTGGTCGGCAGCTGGCTTCTACACGCCAGCTGGCAAATGCTCACCTTCCTGGGCATGTGGGCG GGCTTCGGTATCGGATATGTCATCACCCAGAGAGCCAATGCTGTGAGTGCCCGAGCGGCAGTTGTCGATGGTTTT GGGTGACTGACTGGCACAGTTCTTCGTCGGTACCCATGTCCAATTTGGCGTCATCCTCTGCTGCCTCATGTGCCT GCAGCCCGTCTTCGGCTGGTTCCATCACAGATATTTCGTCCAGCATCAGCAGCGCGGCATCGTCAGCTACGTACA CATCTTTTACGGCCGTTCTCTCATGGCCCTGGGCGTCATCAACGGAGGATTGGGCCTGAAGCTCGCCGGCGGCTC CGGCTCCTTCGTCACGGCGTACAGCGTTATAGCTGCCATCGTTTTCGTGGCATACATCTTGTCTGCCGTGTACGC CACATTCAGGAAGAGGCGCCGGGTTAGCACCGAGACGCCGAAGCTTCGACTGCAGTCCATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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