Protein ID | Hirsu2|260 |
Gene name | |
Location | Contig_1049:2554..3100 |
Strand | + |
Gene length (bp) | 546 |
Transcript length (bp) | 546 |
Coding sequence length (bp) | 546 |
Protein length (aa) | 182 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.4139 | 0.2166 | 0.7543 | 0.1221 | 0.2391 | 0.1893 | 0.2035 | 0.3465 | 0.2312 | 0.0538 |
Orthofinder run ID | 4 |
Orthogroup | 171 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|260 MAIVAFIPIVLATCRGRGYWKDNHTFVERYDCDWSGSGPICITGGSWQLGNSDRRGMVMVATTKEKDFSTICPEN YGAEPIAADSPSWECCQDYGCACVVGHKDLWCYTRMSFTFLVLSPCTARDTMRDQCSLLGVWLQATSRGSAFLGY QEIVINSNKFNVLLTPLLCSQCQSNLDEPRH* |
Coding | >Hirsu2|260 ATGGCCATCGTGGCCTTCATCCCCATAGTCCTTGCAACATGCCGAGGAAGAGGGTACTGGAAAGACAACCACACG TTCGTGGAGAGGTACGACTGCGATTGGTCAGGAAGCGGACCGATTTGCATCACAGGCGGCAGCTGGCAGCTGGGG AACTCCGATCGTCGTGGCATGGTCATGGTGGCGACGACCAAGGAGAAGGACTTCAGCACCATTTGTCCCGAAAAC TACGGCGCCGAGCCCATCGCCGCAGACTCTCCCAGCTGGGAGTGCTGTCAGGACTACGGTTGCGCCTGCGTTGTG GGACACAAGGATCTCTGGTGTTACACACGTATGTCTTTCACATTTCTTGTCCTGTCGCCGTGTACGGCTCGAGAT ACAATGAGAGATCAATGCTCACTCCTCGGTGTCTGGTTGCAGGCGACGTCAAGAGGAAGCGCCTTTCTTGGATAT CAAGAGATAGTCATTAATTCCAACAAGTTCAATGTCCTTTTGACCCCGCTTCTATGTAGTCAGTGTCAAAGCAAC TTGGATGAGCCTAGACATTAG |
Transcript | >Hirsu2|260 ATGGCCATCGTGGCCTTCATCCCCATAGTCCTTGCAACATGCCGAGGAAGAGGGTACTGGAAAGACAACCACACG TTCGTGGAGAGGTACGACTGCGATTGGTCAGGAAGCGGACCGATTTGCATCACAGGCGGCAGCTGGCAGCTGGGG AACTCCGATCGTCGTGGCATGGTCATGGTGGCGACGACCAAGGAGAAGGACTTCAGCACCATTTGTCCCGAAAAC TACGGCGCCGAGCCCATCGCCGCAGACTCTCCCAGCTGGGAGTGCTGTCAGGACTACGGTTGCGCCTGCGTTGTG GGACACAAGGATCTCTGGTGTTACACACGTATGTCTTTCACATTTCTTGTCCTGTCGCCGTGTACGGCTCGAGAT ACAATGAGAGATCAATGCTCACTCCTCGGTGTCTGGTTGCAGGCGACGTCAAGAGGAAGCGCCTTTCTTGGATAT CAAGAGATAGTCATTAATTCCAACAAGTTCAATGTCCTTTTGACCCCGCTTCTATGTAGTCAGTGTCAAAGCAAC TTGGATGAGCCTAGACATTAG |
Gene | >Hirsu2|260 ATGGCCATCGTGGCCTTCATCCCCATAGTCCTTGCAACATGCCGAGGAAGAGGGTACTGGAAAGACAACCACACG TTCGTGGAGAGGTACGACTGCGATTGGTCAGGAAGCGGACCGATTTGCATCACAGGCGGCAGCTGGCAGCTGGGG AACTCCGATCGTCGTGGCATGGTCATGGTGGCGACGACCAAGGAGAAGGACTTCAGCACCATTTGTCCCGAAAAC TACGGCGCCGAGCCCATCGCCGCAGACTCTCCCAGCTGGGAGTGCTGTCAGGACTACGGTTGCGCCTGCGTTGTG GGACACAAGGATCTCTGGTGTTACACACGTATGTCTTTCACATTTCTTGTCCTGTCGCCGTGTACGGCTCGAGAT ACAATGAGAGATCAATGCTCACTCCTCGGTGTCTGGTTGCAGGCGACGTCAAGAGGAAGCGCCTTTCTTGGATAT CAAGAGATAGTCATTAATTCCAACAAGTTCAATGTCCTTTTGACCCCGCTTCTATGTAGTCAGTGTCAAAGCAAC TTGGATGAGCCTAGACATTAG |