Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|260
Gene name
LocationContig_1049:2554..3100
Strand+
Gene length (bp)546
Transcript length (bp)546
Coding sequence length (bp)546
Protein length (aa) 182

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.4139 0.2166 0.7543 0.1221 0.2391 0.1893 0.2035 0.3465 0.2312 0.0538

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup171
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2453
Ophiocordyceps australis 1348a (Ghana) OphauG2|5209
Ophiocordyceps australis 1348a (Ghana) OphauG2|6873
Ophiocordyceps australis map64 (Brazil) OphauB2|6831
Ophiocordyceps australis map64 (Brazil) OphauB2|7159
Ophiocordyceps kimflemingae Ophio5|5336
Ophiocordyceps kimflemingae Ophio5|7312
Ophiocordyceps subramaniannii Hirsu2|186
Ophiocordyceps subramaniannii Hirsu2|260 (this protein)
Ophiocordyceps subramaniannii Hirsu2|2751
Ophiocordyceps subramaniannii Hirsu2|9178

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|260
MAIVAFIPIVLATCRGRGYWKDNHTFVERYDCDWSGSGPICITGGSWQLGNSDRRGMVMVATTKEKDFSTICPEN
YGAEPIAADSPSWECCQDYGCACVVGHKDLWCYTRMSFTFLVLSPCTARDTMRDQCSLLGVWLQATSRGSAFLGY
QEIVINSNKFNVLLTPLLCSQCQSNLDEPRH*
Coding >Hirsu2|260
ATGGCCATCGTGGCCTTCATCCCCATAGTCCTTGCAACATGCCGAGGAAGAGGGTACTGGAAAGACAACCACACG
TTCGTGGAGAGGTACGACTGCGATTGGTCAGGAAGCGGACCGATTTGCATCACAGGCGGCAGCTGGCAGCTGGGG
AACTCCGATCGTCGTGGCATGGTCATGGTGGCGACGACCAAGGAGAAGGACTTCAGCACCATTTGTCCCGAAAAC
TACGGCGCCGAGCCCATCGCCGCAGACTCTCCCAGCTGGGAGTGCTGTCAGGACTACGGTTGCGCCTGCGTTGTG
GGACACAAGGATCTCTGGTGTTACACACGTATGTCTTTCACATTTCTTGTCCTGTCGCCGTGTACGGCTCGAGAT
ACAATGAGAGATCAATGCTCACTCCTCGGTGTCTGGTTGCAGGCGACGTCAAGAGGAAGCGCCTTTCTTGGATAT
CAAGAGATAGTCATTAATTCCAACAAGTTCAATGTCCTTTTGACCCCGCTTCTATGTAGTCAGTGTCAAAGCAAC
TTGGATGAGCCTAGACATTAG
Transcript >Hirsu2|260
ATGGCCATCGTGGCCTTCATCCCCATAGTCCTTGCAACATGCCGAGGAAGAGGGTACTGGAAAGACAACCACACG
TTCGTGGAGAGGTACGACTGCGATTGGTCAGGAAGCGGACCGATTTGCATCACAGGCGGCAGCTGGCAGCTGGGG
AACTCCGATCGTCGTGGCATGGTCATGGTGGCGACGACCAAGGAGAAGGACTTCAGCACCATTTGTCCCGAAAAC
TACGGCGCCGAGCCCATCGCCGCAGACTCTCCCAGCTGGGAGTGCTGTCAGGACTACGGTTGCGCCTGCGTTGTG
GGACACAAGGATCTCTGGTGTTACACACGTATGTCTTTCACATTTCTTGTCCTGTCGCCGTGTACGGCTCGAGAT
ACAATGAGAGATCAATGCTCACTCCTCGGTGTCTGGTTGCAGGCGACGTCAAGAGGAAGCGCCTTTCTTGGATAT
CAAGAGATAGTCATTAATTCCAACAAGTTCAATGTCCTTTTGACCCCGCTTCTATGTAGTCAGTGTCAAAGCAAC
TTGGATGAGCCTAGACATTAG
Gene >Hirsu2|260
ATGGCCATCGTGGCCTTCATCCCCATAGTCCTTGCAACATGCCGAGGAAGAGGGTACTGGAAAGACAACCACACG
TTCGTGGAGAGGTACGACTGCGATTGGTCAGGAAGCGGACCGATTTGCATCACAGGCGGCAGCTGGCAGCTGGGG
AACTCCGATCGTCGTGGCATGGTCATGGTGGCGACGACCAAGGAGAAGGACTTCAGCACCATTTGTCCCGAAAAC
TACGGCGCCGAGCCCATCGCCGCAGACTCTCCCAGCTGGGAGTGCTGTCAGGACTACGGTTGCGCCTGCGTTGTG
GGACACAAGGATCTCTGGTGTTACACACGTATGTCTTTCACATTTCTTGTCCTGTCGCCGTGTACGGCTCGAGAT
ACAATGAGAGATCAATGCTCACTCCTCGGTGTCTGGTTGCAGGCGACGTCAAGAGGAAGCGCCTTTCTTGGATAT
CAAGAGATAGTCATTAATTCCAACAAGTTCAATGTCCTTTTGACCCCGCTTCTATGTAGTCAGTGTCAAAGCAAC
TTGGATGAGCCTAGACATTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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